Clone Name | rbart23a06 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_192798.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 210 tccttccatggaccgtcgaactggtcagggaacttcttgcgtagcccgaccaccacccgt 269 |||||||| || |||||||| |||| |||||||||||||| ||||||| ||||||||| Sbjct: 1034 tccttccacgggccgtcgaagcggtcggggaacttcttgcgcagcccgatcaccacccgc 975 Query: 270 ctcgccgcccgacccttgccagcctccttgag 301 ||||||||||| |||||||| ||||||||||| Sbjct: 974 ctcgccgcccgccccttgccggcctccttgag 943 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 348 cgctttaccccctcgtagaacacgtcctccgcctctgacaacctcccctcgctgcacagc 407 ||||| ||| |||||||||||||||| |||||||| ||| ||| |||| | |||||||| Sbjct: 896 cgcttcaccgcctcgtagaacacgtcgtccgcctccgaccaccgccccgccttgcacagc 837 Query: 408 gcccccaccatgcatgcgtatgttgcgcactccgg 442 || |||||| ||| | ||| || ||||| ||||| Sbjct: 836 gcggccaccacgcaggtgtacgtcgcgcagtccgg 802
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 210 tccttccatggaccgtcgaactggtcagggaacttcttgcgtagcccgaccaccacccgt 269 |||||||| || |||||||| |||| |||||||||||||| ||||||| ||||||||| Sbjct: 24481693 tccttccacgggccgtcgaagcggtcggggaacttcttgcgcagcccgatcaccacccgc 24481634 Query: 270 ctcgccgcccgacccttgccagcctccttgag 301 ||||||||||| |||||||| ||||||||||| Sbjct: 24481633 ctcgccgcccgccccttgccggcctccttgag 24481602 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 348 cgctttaccccctcgtagaacacgtcctccgcctctgacaacctcccctcgctgcacagc 407 ||||| ||| |||||||||||||||| |||||||| ||| ||| |||| | |||||||| Sbjct: 24481555 cgcttcaccgcctcgtagaacacgtcgtccgcctccgaccaccgccccgccttgcacagc 24481496 Query: 408 gcccccaccatgcatgcgtatgttgcgcactccgg 442 || |||||| ||| | ||| || ||||| ||||| Sbjct: 24481495 gcggccaccacgcaggtgtacgtcgcgcagtccgg 24481461 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 ctggctgctgctgctcgtcct 150 ||||||||||||||||||||| Sbjct: 1402404 ctggctgctgctgctcgtcct 1402424 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tccttctcaagctccttcca 217 |||||||||||||||||||| Sbjct: 35906203 tccttctcaagctccttcca 35906184 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 tcgtcctcctccacttcctcctcttcgt 171 |||||||||||| |||||||||| |||| Sbjct: 1837619 tcgtcctcctcctcttcctcctcctcgt 1837646
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 210 tccttccatggaccgtcgaactggtcagggaacttcttgcgtagcccgaccaccacccgt 269 |||||||| || |||||||| |||| |||||||||||||| ||||||| ||||||||| Sbjct: 62077 tccttccacgggccgtcgaagcggtcggggaacttcttgcgcagcccgatcaccacccgc 62018 Query: 270 ctcgccgcccgacccttgccagcctccttgag 301 ||||||||||| |||||||| ||||||||||| Sbjct: 62017 ctcgccgcccgccccttgccggcctccttgag 61986 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 348 cgctttaccccctcgtagaacacgtcctccgcctctgacaacctcccctcgctgcacagc 407 ||||| ||| |||||||||||||||| |||||||| ||| ||| |||| | |||||||| Sbjct: 61939 cgcttcaccgcctcgtagaacacgtcgtccgcctccgaccaccgccccgccttgcacagc 61880 Query: 408 gcccccaccatgcatgcgtatgttgcgcactccgg 442 || |||||| ||| | ||| || ||||| ||||| Sbjct: 61879 gcggccaccacgcaggtgtacgtcgcgcagtccgg 61845
>dbj|AK101490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042I09, full insert sequence Length = 1336 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 210 tccttccatggaccgtcgaactggtcagggaacttcttgcgtagcccgaccaccacccgt 269 |||||||| || |||||||| |||| |||||||||||||| ||||||| ||||||||| Sbjct: 1048 tccttccacgggccgtcgaagcggtcggggaacttcttgcgcagcccgatcaccacccgc 989 Query: 270 ctcgccgcccgacccttgccagcctccttgag 301 ||||||||||| |||||||| ||||||||||| Sbjct: 988 ctcgccgcccgccccttgccggcctccttgag 957 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 348 cgctttaccccctcgtagaacacgtcctccgcctctgacaacctcccctcgctgcacagc 407 ||||| ||| |||||||||||||||| |||||||| ||| ||| |||| | |||||||| Sbjct: 910 cgcttcaccgcctcgtagaacacgtcgtccgcctccgaccaccgccccgccttgcacagc 851 Query: 408 gcccccaccatgcatgcgtatgttgcgcactccgg 442 || |||||| ||| | ||| || ||||| ||||| Sbjct: 850 gcggccaccacgcaggtgtacgtcgcgcagtccgg 816
>dbj|AK063911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A07, full insert sequence Length = 1389 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 210 tccttccatggaccgtcgaactggtcagggaacttcttgcgtagcccgaccaccacccgt 269 |||||||| || |||||||| |||| |||||||||||||| ||||||| ||||||||| Sbjct: 1068 tccttccacgggccgtcgaagcggtcggggaacttcttgcgcagcccgatcaccacccgc 1009 Query: 270 ctcgccgcccgacccttgccagcctccttgag 301 ||||||||||| |||||||| ||||||||||| Sbjct: 1008 ctcgccgcccgccccttgccggcctccttgag 977 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 348 cgctttaccccctcgtagaacacgtcctccgcctctgacaacctcccctcgctgcacagc 407 ||||| ||| |||||||||||||||| |||||||| ||| ||| |||| | |||||||| Sbjct: 930 cgcttcaccgcctcgtagaacacgtcgtccgcctccgaccaccgccccgccttgcacagc 871 Query: 408 gcccccaccatgcatgcgtatgttgcgcactccgg 442 || |||||| ||| | ||| || ||||| ||||| Sbjct: 870 gcggccaccacgcaggtgtacgtcgcgcagtccgg 836
>gb|AY110332.1| Zea mays CL3081_1 mRNA sequence Length = 888 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 336 gccaccttcttgcgctttaccccctcgtagaacacgtcctccgcctc 382 ||||||||| |||||| || ||| |||||||||||||||||||||| Sbjct: 378 gccaccttccggcgcttcactcccgcgtagaacacgtcctccgcctc 424
>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence Length = 135091 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 133836 gctgctgctgctcctcctcctcctcttcctcctc 133869
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 92298 gctgctgctgctcctcctcctcctcttcctcctc 92265
>ref|XM_954385.1| Neurospora crassa OR74A hypothetical protein (NCU02315.1) partial mRNA Length = 4173 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 439 gctgctgctgctcctcctcctccccttcctcctc 406
>ref|XM_331090.1| Neurospora crassa OR74A hypothetical protein (NCU02315.1) partial mRNA Length = 4173 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 439 gctgctgctgctcctcctcctccccttcctcctc 406
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||||||| |||||| |||||||||| Sbjct: 5520226 gctgctgctgctcgtcttcctcctcttcctcctc 5520193 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccac 157 |||||||||||| ||||||||||| Sbjct: 25597951 ctgctgctgctcttcctcctccac 25597928
>gb|AC154766.2| Mus musculus BAC clone RP24-440G8 from chromosome 17, complete sequence Length = 166224 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 84068 gctgctgctgctcctcctcctcctcttcctcctc 84035
>emb|AJ251835.1|MMU251835 Mus musculus Kcnq1, Ltrpc5, Mash2, Tapa-1, Tssc4 and Tssc6 genes, alternative transcripts Length = 249487 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 153685 gctgctgctgctcctcctcctcctcttcctcctc 153652
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||||||| |||||| |||||||||| Sbjct: 63757 gctgctgctgctcgtcttcctcctcttcctcctc 63724
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||||||| |||||| |||||||||| Sbjct: 116820 gctgctgctgctcgtcttcctcctcttcctcctc 116787
>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence Length = 175021 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 143128 gctgctgctgctcctcctcctcctcttcctcctc 143095
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||||||| |||||| |||||||||| Sbjct: 5519441 gctgctgctgctcgtcttcctcctcttcctcctc 5519408 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccac 157 |||||||||||| ||||||||||| Sbjct: 25689260 ctgctgctgctcttcctcctccac 25689237
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence Length = 195263 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 41262 gctgctgctgctcctcctcctcctcttcctcctc 41295
>gb|AC015800.13| Mus musculus chromosome 7, clone RP23-366M16, complete sequence Length = 200026 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 105851 gctgctgctgctcctcctcctcctcttcctcctc 105884
>emb|AJ251788.1|MMU251788 Mus musculus Tssc6 gene Length = 249487 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 153685 gctgctgctgctcctcctcctcctcttcctcctc 153652
>emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chromosome 15, complete sequence Length = 209857 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 184076 gctgctgctgctcctcctcctcctcttcctcctc 184109
>dbj|AP002736.1| Mus musculus genomic DNA, chromosome 7, clone:B308O17, complete sequences Length = 93265 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| |||||||||| Sbjct: 20848 gctgctgctgctcctcctcctcctcttcctcctc 20815
>gb|AC156992.13| Mus musculus chromosome 7, clone RP23-474C17, complete sequence Length = 178169 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 130 ctggctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||||||| ||||||||| | |||||||| Sbjct: 120114 ctggctgctgctgctcctcctcctcctcctcctcctc 120078
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||||||||| Sbjct: 216590 gctgctgctgctcctcctcctcctcctcctcctcttc 216554
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| |||||||||| Sbjct: 89033 ctgctgctgctcctcctcctcctcttcctcctc 89065
>gb|AC124600.5| Mus musculus BAC clone RP23-25H7 from chromosome 16, complete sequence Length = 225102 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||||||||| Sbjct: 171185 gctgctgctgctcttcctcctcctcctcctcctcttc 171149
>gb|AC124171.3| Mus musculus BAC clone RP23-167E23 from chromosome 13, complete sequence Length = 198242 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 137 ctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||||||||| ||||||||||||| Sbjct: 56160 ctgctgctcttcctcctcctcttcctcctcttc 56192
>emb|AL031687.17|HS998H6 Human DNA sequence from clone RP5-998H6 on chromosome 20q13.1 Contains the CDH22 gene for cadherin-like 22, a novel gene and two CpG islands, complete sequence Length = 147815 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcct 165 ||||||||||||| ||||||||| ||||||||| Sbjct: 43558 gctgctgctgctcctcctcctcctcttcctcct 43590
>gb|AC161503.4| Mus musculus chromosome 8, clone RP23-81C3, complete sequence Length = 180580 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||||||||| Sbjct: 26429 gctgctgctgctcctcctcctcctcctcctcctcttc 26393
>gb|AC083809.21| Homo sapiens 12 BAC RP11-785D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136607 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||| ||||||||| ||||||||||||| Sbjct: 129241 gctgctgctcctcctcctcctcctcttcctcctcttc 129205
>gb|AC156934.1| Mus musculus BAC clone RP24-425B15 from 7, complete sequence Length = 123176 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| |||||||||| Sbjct: 7183 ctgctgctgctcctcctcctcctcttcctcctc 7151
>emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chromosome 2, complete sequence Length = 131825 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||||||||| Sbjct: 75793 gctgctgctgctcctcctcctcctcctcctcctcttc 75757
>emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete sequence Length = 132775 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| |||||||||| Sbjct: 60666 ctgctgctgctcctcctcctcctcttcctcctc 60698
>emb|AL713989.20| Mouse DNA sequence from clone RP23-5I4 on chromosome 5, complete sequence Length = 215210 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcct 165 ||||||||||||| ||||||||| ||||||||| Sbjct: 10932 gctgctgctgctcctcctcctcctcttcctcct 10900
>emb|AL806518.6| Mouse DNA sequence from clone RP23-25B10 on chromosome 4, complete sequence Length = 224459 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||||||||| Sbjct: 139393 gctgctgctgctcctcctcctcctcctcctcctcttc 139429
>gb|AC163093.5| Mus musculus chromosome 18, clone RP23-144P22, complete sequence Length = 195116 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| |||||||| ||||||||||||| Sbjct: 89970 ctgctgctgctcctcctcctcttcttcctcctcttc 89935
>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete sequence Length = 157435 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 131 tggctgctgctgctcgtcctcctccacttcct 162 ||||||||||||||| ||||||||| |||||| Sbjct: 119667 tggctgctgctgctcctcctcctcctcttcct 119698
>gb|AC102496.7| Mus musculus chromosome 18, clone RP24-567O18, complete sequence Length = 139461 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| |||||||| ||||||||||||| Sbjct: 117307 ctgctgctgctcctcctcctcttcttcctcctcttc 117272
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence Length = 198374 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcc 164 ||||||||||||| ||||||||| |||||||| Sbjct: 139720 gctgctgctgctcctcctcctcctcttcctcc 139751
>gb|AC140297.3| Mus musculus BAC clone RP24-313L21 from chromosome 7, complete sequence Length = 156825 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 73844 ctgctgctgctcctcctcctcctcctcctcctcttc 73809
>gb|AC152976.1| Mus musculus BAC RP23-103K17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194151 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccactt 159 ||||||||||||| ||||||||||||| Sbjct: 115073 gctgctgctgctcctcctcctccactt 115047
>gb|AC115767.14| Mus musculus chromosome 6, clone RP23-83K15, complete sequence Length = 257790 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccactt 159 ||||||||||||| ||||||||||||| Sbjct: 210984 gctgctgctgctcctcctcctccactt 211010
>gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosome 14, complete sequence Length = 197419 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctcttc 169 ||||||||||||||||||||||| Sbjct: 55835 tcctcctccacttcctcctcttc 55813
>ref|XM_609695.2| PREDICTED: Bos taurus similar to Nascent polypeptide-associated complex alpha subunit, muscle-specific form (Alpha-NAC, muscle-specific form) (LOC531208), mRNA Length = 8513 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 141 tgctcgtcctcctccacttcctcctcttcgt 171 ||||| |||||||||||||||||||| |||| Sbjct: 1316 tgctcctcctcctccacttcctcctcctcgt 1286
>ref|NM_004727.1| Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (SLC24A1), mRNA Length = 5374 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttcg 170 |||||| ||||||||| |||||||||||||| Sbjct: 2894 ctgctcttcctcctcctcttcctcctcttcg 2864
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence Length = 202929 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctcttc 169 ||||||||||||||||||||||| Sbjct: 194216 tcctcctccacttcctcctcttc 194194
>ref|XM_535888.2| PREDICTED: Canis familiaris similar to phosphatase and actin regulator 1 isoform 1 (LOC478723), mRNA Length = 2805 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 143 ctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||||||| Sbjct: 1632 ctcgtcctcctcctcttcctcctcttc 1606
>gb|AC112998.15| Mus musculus chromosome 3, clone RP23-147E7, complete sequence Length = 203273 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 135 tgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| |||| ||||||||| ||||||||||||| Sbjct: 167565 tgctgcagctcctcctcctcctcttcctcctcttc 167599
>gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosome 5, complete sequence Length = 186083 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 143 ctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||||||| Sbjct: 106824 ctcgtcctcctcctcttcctcctcttc 106798
>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence Length = 214268 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctct 167 ||||||||||||| ||||||||| | ||||||||| Sbjct: 167857 gctgctgctgctcctcctcctcctcctcctcctct 167891
>gb|AC098883.3| Mus musculus BAC clone RP23-122F3 from 16, complete sequence Length = 211348 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctct 167 ||||||||||||| ||||||||| | ||||||||| Sbjct: 160343 gctgctgctgctcctcctcctcctcctcctcctct 160309
>ref|XM_846820.1| PREDICTED: Canis familiaris similar to serine/arginine repetitive matrix 2, transcript variant 1 (LOC609646), mRNA Length = 798 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 143 ctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||||||| Sbjct: 287 ctcgtcctcctcctcttcctcctcttc 313
>ref|XM_859515.1| PREDICTED: Canis familiaris similar to serine/arginine repetitive matrix 2, transcript variant 2 (LOC609646), mRNA Length = 1209 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 143 ctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||||||| Sbjct: 287 ctcgtcctcctcctcttcctcctcttc 313
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the 5' end of Ntn1 gene for netrin 1, three genes for a novel proteins (F730038I15Rik), the 3' end of a novel gene (4930535C22Rik) and two CpG islands, complete sequence Length = 221455 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctcttc 169 ||||||||||||||||||||||| Sbjct: 211698 tcctcctccacttcctcctcttc 211720
>gb|AC011939.9| Homo sapiens chromosome 15, clone RP11-16E23, complete sequence Length = 162964 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 140 ctgctcgtcctcctccacttcctcctcttcg 170 |||||| ||||||||| |||||||||||||| Sbjct: 150702 ctgctcttcctcctcctcttcctcctcttcg 150732
>dbj|AB014602.1| Homo sapiens mRNA for KIAA0702 protein, partial cds Length = 5474 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttcg 170 |||||| ||||||||| |||||||||||||| Sbjct: 4028 ctgctcttcctcctcctcttcctcctcttcg 3998
>emb|AL935155.13| Mouse DNA sequence from clone RP23-334M3 on chromosome 2, complete sequence Length = 123205 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctct 167 ||||||||| ||| ||||||||| ||||||||||| Sbjct: 115611 gctgctgcttctcctcctcctcctcttcctcctct 115645
>gb|AF062922.1|AF062922 Homo sapiens retinal rod Na-Ca+K exchanger (NCKX1) mRNA, complete cds Length = 5374 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttcg 170 |||||| ||||||||| |||||||||||||| Sbjct: 2894 ctgctcttcctcctcctcttcctcctcttcg 2864
>gb|AF062921.1|AF062921 Homo sapiens retinal rod Na-Ca+K exchanger splice variant (NCKX1) mRNA, complete cds Length = 3300 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttcg 170 |||||| ||||||||| |||||||||||||| Sbjct: 2607 ctgctcttcctcctcctcttcctcctcttcg 2577
>gb|AF026132.1|AF026132 Homo sapiens retinal rod Na+/Ca+, K+ exchanger (NCKX) mRNA, complete cds Length = 3246 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttcg 170 |||||| ||||||||| |||||||||||||| Sbjct: 2553 ctgctcttcctcctcctcttcctcctcttcg 2523
>emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chromosome 11, complete sequence Length = 176154 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctcttc 169 ||||||||||||||||||||||| Sbjct: 155487 tcctcctccacttcctcctcttc 155509
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 143 ctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||||||| Sbjct: 30504 ctcgtcctcctcctcttcctcctcttc 30478
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||||| ||||||||||||| Sbjct: 98579 ctgctcctcctcctcctcttcctcctcttc 98608
>gb|BC101526.1| Homo sapiens phosphatase and actin regulator 1, mRNA (cDNA clone MGC:126575 IMAGE:8069032), complete cds Length = 1924 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1304 tcgtcctcctcctcttcctcctcttc 1279
>gb|BC101528.1| Homo sapiens phosphatase and actin regulator 1, mRNA (cDNA clone MGC:126577 IMAGE:8069034), complete cds Length = 1918 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1304 tcgtcctcctcctcttcctcctcttc 1279
>gb|AC166836.3| Mus musculus BAC clone RP23-17O23 from chromosome 10, complete sequence Length = 202804 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||||| ||||||||||||| Sbjct: 38204 ctgctcttcctcctcctcttcctcctcttc 38233
>gb|AC168050.2| Mus musculus BAC clone RP23-335J23 from chromosome 18, complete sequence Length = 228033 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 214460 gctgctgctgctcctcctcctcctcctcctcctc 214427
>ref|XM_527102.1| PREDICTED: Pan troglodytes similar to mKIAA1935 protein (LOC471724), mRNA Length = 1617 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cctcctccacttcctcctcttc 169 |||||||||||||||||||||| Sbjct: 1196 cctcctccacttcctcctcttc 1217
>ref|NM_204920.1| Gallus gallus neurogenic differentiation 1 (NEUROD1), mRNA Length = 1596 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 ||||||||| |||||| ||||||||||||| Sbjct: 432 ctgctcgtcgtcctcctcttcctcctcttc 403
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 143666 gctgctgctgctcctcctcctcctcctcctcctc 143699
>gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, complete sequence Length = 172369 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 25826 gctgctgctgctcctcctcctcctcctcctcctc 25859
>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence Length = 184523 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 23314 gctgctgctgctcctcctcctcctcctcctcctc 23281
>gb|AC164101.4| Mus musculus BAC clone RP23-421F16 from chromosome 8, complete sequence Length = 218236 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 104036 gctgctgctgctcctcctcctcctcctcctcctc 104069
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 45335 gctgctgctgctcctcctcctcctcctcctcctc 45368
>gb|AC130138.9| Rattus norvegicus 2 BAC CH230-204B23 (Children's Hospital Oakland Research Institute) complete sequence Length = 189178 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 109547 gctgctgctgctcctcctcctcctcctcctcctc 109514
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 122160 gctgctgctgctcctcctcctcctcctcctcctc 122193
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||||| ||||||||||||| Sbjct: 26144 ctgctcctcctcctcctcttcctcctcttc 26115
>gb|AC132313.5| Mus musculus BAC clone RP24-298L6 from chromosome 18, complete sequence Length = 157754 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 27859 gctgctgctgctcctcctcctcctcctcctcctc 27892
>ref|XM_868368.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 2 (BRG1), mRNA Length = 5588 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881571.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 20 (BRG1), mRNA Length = 5408 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2127 ggctgcggctgctcctcctcctcctcctcctcctcttc 2090
>ref|XM_881559.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 19 (BRG1), mRNA Length = 5468 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881548.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 18 (BRG1), mRNA Length = 5492 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881533.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 17 (BRG1), mRNA Length = 5468 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881522.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 16 (BRG1), mRNA Length = 5468 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881504.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 15 (BRG1), mRNA Length = 5462 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881490.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 14 (BRG1), mRNA Length = 5447 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881474.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 13 (BRG1), mRNA Length = 5456 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881459.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 12 (BRG1), mRNA Length = 5471 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881441.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 11 (BRG1), mRNA Length = 5459 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881429.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 10 (BRG1), mRNA Length = 5462 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881414.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 9 (BRG1), mRNA Length = 5468 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881400.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 8 (BRG1), mRNA Length = 5453 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881384.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 7 (BRG1), mRNA Length = 5432 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881369.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 6 (BRG1), mRNA Length = 5471 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>ref|XM_881332.1| PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 5 (BRG1), mRNA Length = 5489 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||| ||||||||| | ||||||||||| Sbjct: 2208 ggctgcggctgctcctcctcctcctcctcctcctcttc 2171
>gb|AY450292.1| Lagothrix lagotricha clone 311 microsatellite sequence Length = 552 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 427 gctgctgctgctcctcctcctcctcctcctcctc 394 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||| ||||||||| | ||||||||||| Sbjct: 424 gctgctgctcctcctcctcctcctcctcctcctcttc 388
>ref|NM_030948.1| Homo sapiens phosphatase and actin regulator 1 (PHACTR1), mRNA Length = 2150 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1397 tcgtcctcctcctcttcctcctcttc 1372
>gb|AY494977.1| Rattus norvegicus phosphatase and actin regulator 1 (Phactr1) mRNA, complete cds Length = 2776 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1269 tcgtcctcctcctcttcctcctcttc 1244
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 49522 gctgctgctgctcctcctcctcctcctcctcctc 49555
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence Length = 238123 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| |||||||||| | |||||||| Sbjct: 84477 gctgctgctgctggtcctcctcctcctcctcctc 84510
>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence Length = 192769 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 97875 gctgctgctgctcctcctcctcctcctcctcctc 97908
>gb|AC137871.18| Mus musculus chromosome 15, clone RP23-41B9, complete sequence Length = 223529 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 77614 gctgctgctgctcttcctcctccccctcctcctc 77647
>gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, complete sequence Length = 184091 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 136 gctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||||||||| ||||||||||||| Sbjct: 53717 gctgctgcttctcctcctcctcttcctcctcttc 53750
>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete sequence Length = 240536 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 82928 gctgctgctgctcctcctcctcctcctcctcctc 82961
>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence Length = 222814 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 144710 gctgctgctgctcctcctcctcctcctcctcctc 144677
>gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, complete sequence Length = 205074 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| |||||||| |||||||||| Sbjct: 190510 gctgctgctgctcctcctcctcttcttcctcctc 190477
>gb|AC123791.4| Mus musculus BAC clone RP24-304L14 from chromosome 15, complete sequence Length = 149316 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 103452 gctgctgctgctcctcctcctcctcctcctcctc 103485
>gb|AC122347.4| Mus musculus BAC clone RP23-368O1 from chromosome 5, complete sequence Length = 191186 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 86372 gctgctgctgctcctcctcctcctcctcctcctc 86339
>gb|AC122273.4| Mus musculus BAC clone RP23-228B2 from 9, complete sequence Length = 196627 Score = 44.1 bits (22), Expect = 0.38 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 133 gctgctgctgct-cgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||| | ||||||||||| Sbjct: 54307 gctgctgctgcttcgtcctcctcctcctcctcctcttc 54270
>gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, complete sequence Length = 169618 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| || |||||| |||||||||| Sbjct: 56670 gctgctgctgctcctcttcctcctcttcctcctc 56637
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 171089 gctgctgctgctcctcctcctcctcctcctcctc 171056
>gb|AC112680.12| Mus musculus chromosome 9, clone RP23-203D1, complete sequence Length = 226883 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 86295 gctgctgctgctcctcctcctcctcctcctcctc 86262
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 62588 gctgctgctgctcctcctcctcctcctcctcctc 62621 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctc 166 |||||||||||||||||||| Sbjct: 230244 tcctcctccacttcctcctc 230225
>ref|XM_848192.1| PREDICTED: Canis familiaris similar to PWWP domain containing 2, transcript variant 2 (LOC479310), mRNA Length = 2031 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cctcctccacttcctcctcttc 169 |||||||||||||||||||||| Sbjct: 1426 cctcctccacttcctcctcttc 1447
>ref|XM_541491.2| PREDICTED: Canis familiaris similar to serine arginine-rich pre-mRNA splicing factor SR-A1 (LOC484376), mRNA Length = 3649 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 gctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||| ||||||||| | ||||||||||| Sbjct: 2595 gctgctgctcctcctcctcctcctcctcctcttc 2562
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 132363 gctgctgctgctcctcctcctcctcctcctcctc 132330
>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence Length = 209946 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 123465 gctgctgctgctcctcctcctcctcctcctcctc 123498
>ref|XM_502449.1| Yarrowia lipolytica CLIB122, YALI0D05577g predicted mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 tcctccacttcctcctcttcgt 171 |||||||||||||||||||||| Sbjct: 1367 tcctccacttcctcctcttcgt 1346
>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence Length = 188718 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 22495 gctgctgctgctcctcctcctcctcctcctcctc 22528
>gb|AC158590.3| Mus musculus chromosome 5, clone RP24-388K6, complete sequence Length = 186514 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 42361 gctgctgctgctcctcctcctcctcctcctcctc 42328
>emb|AL008729.1|HS257A7 Human DNA sequence from clone RP1-257A7 on chromosome 6p24 Contains the 3' end of gene KIAA1733, a novel gene and the 3' end of a novel gene, complete sequence Length = 127917 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 50917 tcgtcctcctcctcttcctcctcttc 50892
>gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, complete sequence Length = 193245 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 24615 gctgctgctgctcctcctcctcctcctcctcctc 24582
>gb|AC158986.2| Mus musculus BAC clone RP23-284L2 from chromosome 15, complete sequence Length = 226001 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 17646 gctgctgctgctcttcctcctccccctcctcctc 17613
>gb|AC158296.6| Mus musculus chromosome 7, clone RP24-78M9, complete sequence Length = 201897 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 107464 gctgctgctgctcctcctcctcctcctcctcctc 107431
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains the gene for reversion induced LIM protein (Ril), the Slc22a4 and Slc22a9 genes for solute carrier family 22 (organic cation transporter), members 4 and 9, a Sin3-associated polypeptide 18 (Sap18) pseudogene, a pseudogene similar to part of solute carrier family 22 (organic cation transporter), member 4 Slc22a4 and two CpG islands, complete sequence Length = 171301 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 79913 gctgctgctgctcctcctcctcctcctcctcctc 79946
>emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 166549 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 84633 gctgctgctgctcctcctcctcctcctcctcctc 84666
>emb|AL662815.13| Mouse DNA sequence from clone RP23-361M22 on chromosome 1 Contains part of the gene for ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and a novel gene, complete sequence Length = 155204 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 150896 gctgctgctgctcctcctcctcctcctcctcctc 150929
>emb|AL596256.14| Mouse DNA sequence from clone RP23-259D24 on chromosome 11, complete sequence Length = 169405 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| |||||||||| Sbjct: 154465 gctgctgctgctgctcctcctccccttcctcctc 154498
>gb|BC098634.1| Rattus norvegicus phosphatase and actin regulator 1, mRNA (cDNA clone MGC:112561 IMAGE:7317963), complete cds Length = 2078 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1400 tcgtcctcctcctcttcctcctcttc 1375
>gb|AC163291.3| Mus musculus BAC clone RP23-263M4 from chromosome 15, complete sequence Length = 208289 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 43779 gctgctgctgctcctcctcctcctcctcctcctc 43812
>ref|NM_214457.1| Rattus norvegicus phosphatase and actin regulator 1 (Phactr1), mRNA Length = 2776 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1269 tcgtcctcctcctcttcctcctcttc 1244
>dbj|AK090769.1| Homo sapiens cDNA FLJ33450 fis, clone BRAMY2000025 Length = 2050 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1397 tcgtcctcctcctcttcctcctcttc 1372
>dbj|AK055921.1| Homo sapiens cDNA FLJ31359 fis, clone MESAN2000501, weakly similar to Homo sapiens DNA cytosine methyltransferase 3 alpha (DNMT3A) mRNA Length = 2608 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cctcctccacttcctcctcttc 169 |||||||||||||||||||||| Sbjct: 1129 cctcctccacttcctcctcttc 1150
>ref|NM_141658.3| Drosophila melanogaster CG8301-RA (CG8301), mRNA Length = 3005 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 1150 gctgctgctgctcctcctcctcctcctcctcctc 1117
>gb|AY094804.1| Drosophila melanogaster LD25464 full insert cDNA Length = 2950 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 1113 gctgctgctgctcctcctcctcctcctcctcctc 1080
>gb|AC008706.5| Homo sapiens chromosome 5 clone CTB-77M23, complete sequence Length = 164394 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cctcctccacttcctcctcttc 169 |||||||||||||||||||||| Sbjct: 88645 cctcctccacttcctcctcttc 88666
>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence Length = 188095 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 141785 gctgctgctgctcctcctcctcctcctcctcctc 141752
>emb|AL626778.12| Mouse DNA sequence from clone RP23-326E2 on chromosome 4, complete sequence Length = 186208 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcct 162 ||||||||||||| ||||||||||| |||| Sbjct: 128922 gctgctgctgctcttcctcctccacctcct 128951
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 118676 gctgctgctgctcctcctcctcctcctcctcctc 118709
>gb|AC154732.3| Mus musculus BAC clone RP24-380F18 from chromosome 12, complete sequence Length = 172458 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcct 162 ||||||||||||| ||||||||| |||||| Sbjct: 135599 gctgctgctgctcctcctcctcctcttcct 135628
>dbj|AK039232.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330001M08 product:contactin 3, full insert sequence Length = 3549 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| |||||||| |||||||||| Sbjct: 574 gctgctgctgctcctcctcctcttcttcctcctc 607
>dbj|AK028203.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700052F17 product:hypothetical protein, full insert sequence Length = 1832 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 |||||| ||||||||| ||||||||||||| Sbjct: 44 ctgctcctcctcctcctcttcctcctcttc 15
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 147011 gctgctgctgctcctcctcctcctcctcctcctc 147044
>gb|AC009350.4|AC009350 Drosophila melanogaster, chromosome 3R, region 85D-85E, BAC clone BACR19N07, complete sequence Length = 176933 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 92225 gctgctgctgctcctcctcctcctcctcctcctc 92192
>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193116 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 126347 gctgctgctgctcctcctcctcctcctcctcctc 126314
>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 216930 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| |||||||| |||||||||| Sbjct: 14241 gctgctgctgctcctcctcctcttcttcctcctc 14208
>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence Length = 179606 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||| ||| |||||||||| Sbjct: 30845 gctgctgctgctcctcctcttcctcttcctcctc 30812
>ref|XM_579745.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_214457 (LOC497711), mRNA Length = 2777 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1270 tcgtcctcctcctcttcctcctcttc 1245
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 1456 gctgctgctgctcttcctcctcctcctcctcctc 1489
>emb|Y09596.1|GGNEURODL G.gallus mRNA for NeuroD-like protein Length = 1164 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 ||||||||| |||||| ||||||||||||| Sbjct: 275 ctgctcgtcgtcctcctcttcctcctcttc 246
>gb|AF198578.1|AF198578 Orconectes virilis strain KC95/4 internal transcribed spacer 1, partial sequence Length = 630 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctct 167 |||||||||||| ||||||||| | ||||||||| Sbjct: 358 ctgctgctgctcctcctcctcctcctcctcctct 391
>gb|AF198577.1|AF198577 Orconectes virilis strain KC95/3 internal transcribed spacer 1, partial sequence Length = 630 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctct 167 |||||||||||| ||||||||| | ||||||||| Sbjct: 358 ctgctgctgctcctcctcctcctcctcctcctct 391
>gb|AF198576.1|AF198576 Orconectes virilis strain KC95/2 internal transcribed spacer 1, partial sequence Length = 629 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctct 167 |||||||||||| ||||||||| | ||||||||| Sbjct: 349 ctgctgctgctcctcctcctcctcctcctcctct 382
>gb|AF198575.1|AF198575 Orconectes virilis strain KC95/1 internal transcribed spacer 1, partial sequence Length = 640 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctct 167 |||||||||||| ||||||||| | ||||||||| Sbjct: 356 ctgctgctgctcctcctcctcctcctcctcctct 389
>gb|AC101874.8| Mus musculus chromosome 7, clone RP23-366A20, complete sequence Length = 179708 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 95303 gctgctgctgctcctcctcctcctcctcctcctc 95336
>emb|CT030142.10| Mouse DNA sequence from clone RP23-422H22 on chromosome 12, complete sequence Length = 203796 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcct 162 ||||||||||||| ||||||||| |||||| Sbjct: 135124 gctgctgctgctcctcctcctcctcttcct 135095
>gb|AC153509.3| Mus musculus 10 BAC RP23-60H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192528 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 169555 gctgctgctgctcctcctcctcctcctcctcctc 169588
>gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21 of 118 of the complete sequence Length = 243348 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 121392 gctgctgctgctcctcctcctcctcctcctcctc 121359
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 157730 gctgctgctgctcttcctcctcctcctcctcctc 157697
>gb|AC079680.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-282p18, complete sequence Length = 175217 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 105281 gctgctgctgctcctcctcctcctcctcctcctc 105248
>gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete sequence Length = 214372 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 167357 gctgctgctgctcctcctcctcctcctcctcctc 167390
>emb|AL732461.23| Mouse DNA sequence from clone RP23-95K12 on chromosome X, complete sequence Length = 245751 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 233579 gctgctgctgctcctcctcctcctcctcctcctc 233612
>gb|AF060885.1|AF060885 Gallus gallus NeuroD (neuroD) mRNA, complete cds Length = 1596 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctcttc 169 ||||||||| |||||| ||||||||||||| Sbjct: 432 ctgctcgtcgtcctcctcttcctcctcttc 403
>emb|AL844144.10| Mouse DNA sequence from clone RP23-204D17 on chromosome 2, complete sequence Length = 178965 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 178421 gctgctgctgctcttcctcctcctcctcctcctc 178454
>emb|CR974483.16| Mouse DNA sequence from clone RP23-296D10 on chromosome 17, complete sequence Length = 125345 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 gctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||||||||| ||||||||||||| Sbjct: 94098 gctgctgcttctcctcctcctcttcctcctcttc 94065
>emb|BX000694.9| Mouse DNA sequence from clone RP23-30B5 on chromosome 4, complete sequence Length = 55045 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 11080 gctgctgctgctcctcctcctcctcctcctcctc 11047
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 tcctccacttcctcctcttcgt 171 |||||||||||||||||||||| Sbjct: 719534 tcctccacttcctcctcttcgt 719513
>gb|DQ079796.1| Palaemonetes paludosus voucher MLP124 28S large subunit ribosomal RNA gene, partial sequence Length = 2696 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 ctggctgctgctgctcgtcctcctcc 155 |||||||||||||||| ||||||||| Sbjct: 1896 ctggctgctgctgctcctcctcctcc 1921
>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete sequence Length = 218691 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 80337 gctgctgctgctcctcctcctcctcctcctcctc 80370
>gb|U29397.1|RNU29397 Rattus norvegicus plasma membrane Ca2+ ATPase isoform 3 (PMCA3) gene, 5' flanking region Length = 3126 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 2619 gctgctgctgctcctcctcctcctcctcctcctc 2652
>emb|AL645968.6| Mouse DNA sequence from clone DN-25M4 on chromosome 3, complete sequence Length = 161821 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 136 gctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||||||||| ||||||||||||| Sbjct: 67699 gctgctgctgctcctcctcctcttcctcctcttc 67732
>emb|AL807790.15| Mouse DNA sequence from clone RP23-471O23 on chromosome 4, complete sequence Length = 179628 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 148148 gctgctgctgctcctcctcctccccctcctcctc 148115
>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete sequence Length = 189860 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 153945 gctgctgctgctcctcctcctcctcctcctcctc 153978
>emb|AL365317.22| Mouse DNA sequence from clone RP23-179K8 on chromosome 1, complete sequence Length = 187131 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctc 166 ||||||||||||| ||||||||| | |||||||| Sbjct: 13590 gctgctgctgctcctcctcctcctcctcctcctc 13623
>dbj|AB051520.1| Homo sapiens mRNA for KIAA1733 protein, partial cds Length = 4784 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||||||| Sbjct: 1337 tcgtcctcctcctcttcctcctcttc 1312
>ref|NM_125659.2| Arabidopsis thaliana ELF5 (EARLY FLOWERING 5) AT5G62640 (ELF5) transcript variant AT5G62640.1 mRNA, complete cds Length = 1896 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 720 tcctcctccacttcctcctct 740
>ref|NM_001037049.1| Arabidopsis thaliana ELF5 (EARLY FLOWERING 5) AT5G62640 (ELF5) transcript variant AT5G62640.2 mRNA, complete cds Length = 1886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 709 tcctcctccacttcctcctct 729
>gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, complete sequence Length = 193859 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 tcgtcctcctccacttcctcctctt 168 |||||||||||| |||||||||||| Sbjct: 39437 tcgtcctcctcctcttcctcctctt 39461
>gb|DQ089694.1| Trematomus pennellii hypoxia inducible factor 1 alpha mRNA, partial cds Length = 1225 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| | |||||||| Sbjct: 103 ctgctgctgctcctcctcctcctcctcctcctc 71
>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence Length = 147128 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcct 165 ||||||||||||| ||||||||| | ||||||| Sbjct: 85554 gctgctgctgctcctcctcctcctcctcctcct 85586
>gb|AC114667.12| Mus musculus chromosome 1, clone RP24-175L10, complete sequence Length = 171306 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 68455 tcctcctccacttcctcctct 68475 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 68304 tcctcctccacttcctcctct 68324 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctc 166 |||||||||||||||||||| Sbjct: 68372 tcctcctccacttcctcctc 68391
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence Length = 196946 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| | |||||||| Sbjct: 96429 ctgctgctgctcctcctcctcctcctcctcctc 96397 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcct 165 |||||||||||| ||||||||| | ||||||| Sbjct: 96084 ctgctgctgctcctcctcctcctcctcctcct 96053
>ref|XM_450549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1358 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcc 164 |||||||||||||| ||||||||| | |||||| Sbjct: 221 ggctgctgctgctcctcctcctccgcctcctcc 189
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 137 ctgctgctcgtcctcctccacttcctcctcttc 169 ||||| ||| ||||||||| ||||||||||||| Sbjct: 135082 ctgctcctcttcctcctcctcttcctcctcttc 135050
>ref|NM_189817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 570 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcct 153 ||||||||||||||||||||| Sbjct: 36 gctgctgctgctcgtcctcct 56
>gb|AC136004.10| Mus musculus chromosome 7, clone RP23-235M8, complete sequence Length = 185174 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 112958 gctgctgctgctgttcctcctcctcctcctcctcttc 112994
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tcctccacttcctcctcttcg 170 ||||||||||||||||||||| Sbjct: 54500 tcctccacttcctcctcttcg 54480
>gb|AC162377.2| Mus musculus BAC clone RP24-511C17 from chromosome 13, complete sequence Length = 139617 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 126295 tcctcctccacttcctcctct 126315
>ref|XM_606197.2| PREDICTED: Bos taurus similar to testicular serine protease 2 (LOC527795), partial mRNA Length = 832 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tcttctctggctgctgctgct 144 ||||||||||||||||||||| Sbjct: 48 tcttctctggctgctgctgct 68
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| |||| |||||||| Sbjct: 165915 gctgctgctgctgctcctcctcctcttcttcctcttc 165879
>gb|AC118934.9| Mus musculus chromosome 19, clone RP24-172J14, complete sequence Length = 152728 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctctt 168 |||||| ||||||||| |||||||||||| Sbjct: 93134 ctgctcctcctcctcctcttcctcctctt 93106
>gb|AC123253.4| Rattus norvegicus 12 BAC CH230-230N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231202 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 91843 tcctcctccacttcctcctct 91863
>gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, complete sequence Length = 174604 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 tggctgctgctgctcgtcctcctccacttcctc 163 ||||||||||||||| |||||||| ||||||| Sbjct: 56836 tggctgctgctgctccacctcctcctcttcctc 56868
>ref|XM_421392.1| PREDICTED: Gallus gallus similar to Protein phosphatase 1, regulatory (inhibitor) subunit 13B (LOC423487), mRNA Length = 4523 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 ctgctcgtcctcctccacttcctcc 164 |||||| |||||||||||||||||| Sbjct: 2687 ctgctcttcctcctccacttcctcc 2711
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 137 ctgctgctcgtcctcctccacttcctcctcttc 169 ||||| ||| ||||||||| ||||||||||||| Sbjct: 2247 ctgctcctcttcctcctcctcttcctcctcttc 2215
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| || ||||| ||||||||||||| Sbjct: 154271 gctgctgctgctcctcttcctcttcttcctcctcttc 154307
>gb|BC000588.2| Homo sapiens HIRA interacting protein 3, mRNA (cDNA clone MGC:1814 IMAGE:3345739), complete cds Length = 2381 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 1198 tcctcctccacttcctcctct 1178
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||| ||||| ||| ||||||||||||| Sbjct: 197881 gctgctgctcctcttcctcttcctcttcctcctcttc 197917
>gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome 18, complete sequence Length = 152497 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctctt 168 ||||||||||||| ||||||||| | |||||||||| Sbjct: 142289 ggctgctgctgctgctcctcctcctcctcctcctctt 142253
>gb|AY526094.1| Arabidopsis thaliana EARLY FLOWERING 5 (ELF5) mRNA, complete cds Length = 1757 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 598 tcctcctccacttcctcctct 618
>ref|NM_003609.2| Homo sapiens HIRA interacting protein 3 (HIRIP3), mRNA Length = 2352 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 1198 tcctcctccacttcctcctct 1178
>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence Length = 232699 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 tcgtcctcctccacttcctcctctt 168 |||||||||||| |||||||||||| Sbjct: 60051 tcgtcctcctcctcttcctcctctt 60027
>gb|AY568672.1| Arabidopsis thaliana At5g46730 (At5g46730) mRNA, complete cds Length = 813 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 gctcgtcctcctccacttcctcctc 166 |||| |||||||||||||||||||| Sbjct: 605 gctcctcctcctccacttcctcctc 581
>gb|AC136453.3| Mus musculus chromosome 19 clone RP24-327L21, complete sequence Length = 201474 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| || ||| ||||||||| ||||||||||||| Sbjct: 95076 gctgcttctcctcctcctcctcctcttcctcctcttc 95040
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 197578 gctgctgctgctgctcctcctcctcctcctcctcttc 197542
>gb|AC124012.4| Mus musculus BAC clone RP24-357P22 from chromosome 18, complete sequence Length = 193064 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctcttcgttgct 175 ||||||||| ||||||||||||| ||||| Sbjct: 35047 tcctcctcctcttcctcctcttctttgct 35075
>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence Length = 185210 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 132 ggctgctgctgctcgtcctcctccacttcctcctctt 168 ||||||||||||| ||||||||| | |||||||||| Sbjct: 143693 ggctgctgctgctgctcctcctcctcctcctcctctt 143729
>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence Length = 195696 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | |||| |||||| Sbjct: 15975 gctgctgctgctcctcctcctcctcctccttctcttc 15939
>ref|XM_805746.1| Trypanosoma cruzi strain CL Brener ATP-dependent RNA helicase (Tc00.1047053510351.40) partial mRNA Length = 2688 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 143 ctcgtcctcctccacttcctcctcttcgt 171 |||||||||||| ||||||||||||||| Sbjct: 2226 ctcgtcctcctcttcttcctcctcttcgt 2198
>ref|XM_807386.1| Trypanosoma cruzi strain CL Brener ATP-dependent RNA helicase (Tc00.1047053507601.140) partial mRNA Length = 2547 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 143 ctcgtcctcctccacttcctcctcttcgt 171 |||||||||||| ||||||||||||||| Sbjct: 2082 ctcgtcctcctcttcttcctcctcttcgt 2054
>gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, complete sequence Length = 131371 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 ctcgtcctcctccacttcctcctct 167 ||||||||||||| ||||||||||| Sbjct: 52541 ctcgtcctcctcctcttcctcctct 52565
>gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome 3, complete sequence Length = 138128 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||| ||||| Sbjct: 82711 gctgctgctgctcctcctcctcctcctcctcttcttc 82747 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 82708 gctgctgctgctgctcctcctcctcctcctcctcttc 82744
>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence Length = 173971 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcc 164 |||||||||||||| || |||||| |||||||| Sbjct: 136086 ggctgctgctgctcctcttcctcctcttcctcc 136054
>gb|AC122456.4| Mus musculus BAC clone RP24-265M23 from chromosome 16, complete sequence Length = 158610 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||| ||||||||| | ||||||||||| Sbjct: 87797 gctgctgctcctcctcctcctcctcctcctcctcttc 87833 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||||| | |||||||| Sbjct: 87795 ctgctgctgctcctcctcctcctcctcctcctc 87827
>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence Length = 192812 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||| ||||| ||| ||||||||||||| Sbjct: 22774 gctgctgctcctcttcctcttcctcttcctcctcttc 22810
>gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome 14, complete sequence Length = 141017 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | |||| |||||| Sbjct: 11030 gctgctgctgctcctcctcctcctcctccttctcttc 11066
>gb|AC073205.6| Homo sapiens BAC clone RP11-323K15 from 7, complete sequence Length = 149914 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | || |||||||| Sbjct: 89679 gctgctgctgctcctcctcctcctcctcttcctcttc 89643
>gb|AC091738.4| Homo sapiens BAC clone RP11-535E8 from 7, complete sequence Length = 131928 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 134 ctgctgctgctcgtcctcctccacttcctcctc 166 |||||||||||| ||||||| | |||||||||| Sbjct: 129209 ctgctgctgctcctcctcctgctcttcctcctc 129177
>gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, complete sequence Length = 198009 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||| ||||| Sbjct: 144900 gctgctgctgctcctcctcctcctcctcctcttcttc 144936 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 144897 gctgctgctgctgctcctcctcctcctcctcctcttc 144933
>gb|AC128660.31| Medicago truncatula clone mth2-14p23, complete sequence Length = 99170 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 44243 tcctcctccacttcctcctct 44223
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 197397 gctgctgctgctgttcctcctcctcctcctcctcttc 197433
>ref|NM_001031751.1| Bos taurus hepatocyte growth factor (HGF), mRNA Length = 2492 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcct 165 |||||||| || ||||||||||||| ||||||| Sbjct: 164 gctgctgcagcacgtcctcctccacctcctcct 196
>emb|AL160155.19| Human DNA sequence from clone RP11-461N23 on chromosome 13 Contains part of a novel gene (FLJ30001), a H2A histone family, pseudogene, the GPR18 gene for G protein-coupled receptor 18, the EBI2 gene for Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor), two novel genes and a CpG island, complete sequence Length = 149478 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||| ||| | ||||||| ||||||||||||| Sbjct: 82605 gctgctgctcctcctgctcctcctcttcctcctcttc 82641
>emb|AL139156.11| Human DNA sequence from clone RP4-800M22 on chromosome 1p32.3-34.1 Contains the 5' end of the MADHIP gene for mothers against decapentaplegic (MAD) homolog (Drosophila) interacting protein receptor activation anchor, a pseudogene similar to part of alcohol dehydrogenase 5 (class III) chi polypeptidem (ADH5), a transformer-2 alpha (TRA2A) pseudogene, a IAP-associated factor VIAF1 (VIAF1) pseudogene, a pseudogene similar to part of ribosomal protein L9 (RPL9), the 3' end of the gene for a novel protein similar to RNA polymerase B transcription factor 3 (MGC23908) and a CpG island, complete sequence Length = 138985 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctcttcgt 171 ||||||||| ||||||||||||||| Sbjct: 87425 tcctcctcctcttcctcctcttcgt 87449
>gb|AC134177.1| Drosophila pseudoobscura FOSMID DPSF1-548A1 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 46224 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctgctcgtcctcctccacttcctcctctt 168 |||||| ||||||||||| |||||||||| Sbjct: 25884 ctgctcatcctcctccacctcctcctctt 25856
>gb|AC105586.5| Rattus norvegicus 3 BAC CH230-239D4 (Children's Hospital Oakland Research Institute) complete sequence Length = 235468 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||| || ||| ||||||||| ||||||||||||| Sbjct: 172232 gctgctcctcctcctcctcctcctcttcctcctcttc 172268
>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence Length = 206249 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 63236 tcctcctccacttcctcctct 63216
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 141 tgctcgtcctcctccacttcctcctcttc 169 ||||| ||||||||| ||||||||||||| Sbjct: 1304 tgctcctcctcctcctcttcctcctcttc 1276
>emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chromosome 11, complete sequence Length = 193004 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcc 161 ||||||||| ||| ||||||||||||||| Sbjct: 102987 gctgctgctcctcctcctcctccacttcc 102959
>emb|AL627097.6| Mouse DNA sequence from clone RP23-59B16 on chromosome 11 Contains a novel pseudogene, the Zfp287 gene for zinc finger protein 287, three novel genes (4921522H14Rik), a WD repeat and SOCS box containing protein 2 pseudogene (LOC213946), the gene for a novel protein (MGC39058) and the 5' end of the Trim16 gene for tripartite motif protein 16, complete sequence Length = 161686 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 tgctcgtcctcctccacttcctcctcttc 169 ||||| ||||||||| ||||||||||||| Sbjct: 697 tgctcctcctcctcctcttcctcctcttc 725
>emb|CR624147.1| full-length cDNA clone CS0DL009YP05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1852 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 733 tcctcctccacttcctcctct 713
>gb|AC087332.6| Mus Musculus Chromosome 2 RP23-58L18, complete sequence Length = 143720 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cctcctccacttcctcctctt 168 ||||||||||||||||||||| Sbjct: 34278 cctcctccacttcctcctctt 34258
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| || ||||| ||||||||||||| Sbjct: 23359 gctgctgctgctcctcttcctcttcttcctcctcttc 23395
>gb|AF361818.1| Arabidopsis thaliana AT5g62640/MRG21_6 mRNA, complete cds Length = 1896 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 720 tcctcctccacttcctcctct 740
>gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, complete sequence Length = 157481 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 62458 tcctcctccacttcctcctct 62478
>emb|AJ630502.1| Arabidopsis thaliana partial mRNA for hypothetical protein, clone At5g46730 Length = 812 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 gctcgtcctcctccacttcctcctc 166 |||| |||||||||||||||||||| Sbjct: 605 gctcctcctcctccacttcctcctc 581
>gb|AC154568.2| Mus musculus BAC clone RP23-246L11 from chromosome 16, complete sequence Length = 182206 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 tgctcgtcctcctccacttcctcctcttc 169 ||||| ||||||||| ||||||||||||| Sbjct: 70694 tgctcttcctcctcctcttcctcctcttc 70722
>gb|AC154596.2| Mus musculus BAC clone RP23-354C17 from chromosome 17, complete sequence Length = 208266 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 141 tgctcgtcctcctccacttcctcctcttc 169 ||||| ||||||||| ||||||||||||| Sbjct: 46875 tgctcctcctcctcctcttcctcctcttc 46847
>gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome 18, complete sequence Length = 198600 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctcttcgttgct 175 ||||||||| ||||||||||||| ||||| Sbjct: 145402 tcctcctcctcttcctcctcttctttgct 145430
>dbj|AK016513.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931440P22 product:unclassifiable, full insert sequence Length = 755 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 523 gctgctgctgctgctcctcctccccctcctcctcttc 487
>dbj|AK083690.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030067L12 product:hypothetical protein, full insert sequence Length = 1985 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccac 157 ||||||||||||| ||||||||||| Sbjct: 115 gctgctgctgctcttcctcctccac 139
>gb|AY642855.1| Bos taurus HGF genomic sequence Length = 215 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcct 165 |||||||| || ||||||||||||| ||||||| Sbjct: 149 gctgctgcagcacgtcctcctccacctcctcct 181
>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149183 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 ||||||||||||| ||||||||| | ||||| ||||| Sbjct: 101960 gctgctgctgctcttcctcctcctcctcctcatcttc 101996
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 132 ggctgctgctgctcgtcctcctccacttcctcc 164 |||||||||||||| ||||||||| | |||||| Sbjct: 9599578 ggctgctgctgctcctcctcctccgcctcctcc 9599546
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gctgctgctgctcgtcctcct 153 ||||||||||||||||||||| Sbjct: 25416006 gctgctgctgctcgtcctcct 25416026
>gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence Length = 136083 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 tcctcctccacttcctcctcttcgttgct 175 ||||||||| ||||||||||||| ||||| Sbjct: 106835 tcctcctcctcttcctcctcttcattgct 106807
>gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete sequence Length = 237678 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 ctcctccacttcctcctcttc 169 ||||||||||||||||||||| Sbjct: 164202 ctcctccacttcctcctcttc 164222
>emb|BX832606.1|CNS0A0YN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH84ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctct 167 ||||||||||||||||||||| Sbjct: 667 tcctcctccacttcctcctct 687
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 133 gctgctgctgctcgtcctcctccacttcctcctcttc 169 |||||||||||| ||||||||| | ||||||||||| Sbjct: 37579 gctgctgctgctgctcctcctcctcctcctcctcttc 37543
>gb|AC009264.6|AC009264 Homo sapiens chromosome 7 clone RP11-271F4, complete sequence Length = 164824 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 tcctcctccacttcctcctcttcgt 171 ||||||||| ||||||||||||||| Sbjct: 106865 tcctcctcctcttcctcctcttcgt 106889 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,497,449 Number of Sequences: 3902068 Number of extensions: 4497449 Number of successful extensions: 135357 Number of sequences better than 10.0: 717 Number of HSP's better than 10.0 without gapping: 718 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 132402 Number of HSP's gapped (non-prelim): 2945 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)