>NET2_CHICK (Q90923) Netrin-2 precursor (Fragment)|
          Length = 581

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = +2

Query: 203 ILSSNECGHRRSLDLSRSCQLSDVRRTNPSACEPGRQLLHLYLQHVSAVANVTCIPANTV 382
           + +S+ CG   +    R C  SD RR +P A          YL  ++  AN+TC  + T+
Sbjct: 52  VQASSTCGKPPT----RHCDASDPRRAHPPA----------YLTDLNTAANMTCWRSETL 97

Query: 383 HPDSHH 400
           H   H+
Sbjct: 98  HHLPHN 103

>TNR7_HUMAN (P26842) Tumor necrosis factor receptor superfamily member 7|
           precursor (CD27L receptor) (T-cell activation antigen
           CD27) (T14)
          Length = 260

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +2

Query: 296 CEPGRQLLHLYLQHVSAVANVTCIPANTVHPDSH---HCHS 409
           CEPG  L+    QH  A     CIP  +  PD H   HC S
Sbjct: 43  CEPGTFLVKDCDQHRKAAQCDPCIPGVSFSPDHHTRPHCES 83

>POLG_TMEVG (P08545) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2303

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 12/54 (22%)
 Frame = -3

Query: 263 AGNSGTSPGSG------------GDHTRCCLECSTDVVKYGDVYITITIAIFTT 138
           AGNS T+  S             G+H   C + +TD V   + Y TI +A +TT
Sbjct: 166 AGNSATNTQSTVGRLCGYGKSHHGEHPTSCADAATDKVLAAERYYTIDLASWTT 219

>POLG_TMEVD (P13899) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2301

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 12/54 (22%)
 Frame = -3

Query: 263 AGNSGTSPGSG------------GDHTRCCLECSTDVVKYGDVYITITIAIFTT 138
           AGNS T+  S             G+H   C + +TD V   + Y TI +A +TT
Sbjct: 166 AGNSATNTQSTVGRLCGYGEAHHGEHPASCADTATDKVLAAERYYTIDLASWTT 219

>SYA_IDILO (Q5QUV7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 865

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 49  RHVGGRYNTRPTAIAEREVQSRHSFRRFEQ 138
           + + G   T P+++AE+  Q +H FR  E+
Sbjct: 705 QQIAGELKTEPSSVAEKVQQLQHKFRELER 734

>POLG_TMEVB (P08544) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2303

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 12/54 (22%)
 Frame = -3

Query: 263 AGNSGTSPGSG------------GDHTRCCLECSTDVVKYGDVYITITIAIFTT 138
           AGNS T+  S             G+H   C + +TD V   + Y TI +A +TT
Sbjct: 166 AGNSATNTQSTVGRLCGYGKSHHGEHPASCADTATDKVLAAERYYTIDLASWTT 219

>NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18|
          Length = 394

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 9/50 (18%)
 Frame = +2

Query: 263 LSDVRRTNPSACEPGRQLLHLYLQH---------VSAVANVTCIPANTVH 385
           + D+   NPS+ E    LLHL L+H         + A  N+  + AN +H
Sbjct: 286 IQDMIDLNPSSIEVSYMLLHLSLEHAGKRLHGDALDATENLVQVQANNLH 335

>YNM0_YEAST (P53922) Very hypothetical 17.9 kDa protein in TOM70-PSU1|
           intergenic region
          Length = 161

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 197 CCILSSNECGHRRSLDLSRSCQLSDVRRTNPSACEPGRQLL 319
           CC++ SN          S+SC +S++ R   S C+ G ++L
Sbjct: 67  CCLVCSN----------SKSCTISNITRDPESECDKGSRIL 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,932,366
Number of Sequences: 219361
Number of extensions: 1113916
Number of successful extensions: 3344
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)