ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106744.1| Zea mays PCO111647 mRNA sequence 220 3e-54
2emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosyla... 131 2e-27
3gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence 68 3e-08
4gb|AY105107.1| Zea mays PCO140468 mRNA sequence 68 3e-08
5gb|AY104207.1| Zea mays PCO111099 mRNA sequence 54 4e-04
6gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence 52 0.002
7gb|AY107002.1| Zea mays PCO111646 mRNA sequence 52 0.002
8gb|AY106262.1| Zea mays PCO111648 mRNA sequence 52 0.002
9emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 50 0.006
10gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 50 0.006
11ref|XM_629286.1| Dictyostelium discoideum putative cation-transp... 46 0.10
12gb|AF238314.1|AF238314 Dictyostelium discoideum putative cation-... 46 0.10
13gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase ... 46 0.10
14gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase ... 46 0.10
15gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia regio... 44 0.40
16emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chr... 44 0.40
17emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein 42 1.6
18ref|XM_729123.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 1.6
19ref|XM_737252.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 1.6
20gb|AC154188.2| Mus musculus BAC clone RP24-455C11 from chromosom... 42 1.6
21emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.6
22emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chr... 42 1.6
23gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 42 1.6
24ref|XM_656241.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.2
25ref|XM_389169.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.2
26gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence 40 6.2
27emb|Z70232.1|HSU139A4 Human DNA sequence from clone LL0XNC01-139... 40 6.2
28gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.2
29gb|AF229281.1| Amblyolepis setigera internal transcribed spacer ... 40 6.2
30gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park C... 40 6.2
31gb|AC106798.3| Homo sapiens chromosome 5 clone RP11-434D9, compl... 40 6.2
32gb|AC112206.3| Homo sapiens chromosome 5 clone RP11-83M16, compl... 40 6.2
33ref|XM_631572.1| Dictyostelium discoideum AX4 hypothetical prote... 40 6.2
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, com... 40 6.2
36dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AK120714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
39gb|AC131231.10| Mus musculus chromosome 19, clone RP24-395L19, c... 40 6.2
40gb|U51272.1|ENU51272 Emericella nidulans putative 1,3-beta-D-glu... 40 6.2 
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence
          Length = 1267

 Score =  220 bits (111), Expect = 3e-54
 Identities = 230/269 (85%), Gaps = 3/269 (1%)
 Strand = Plus / Minus

                                                                       
Query: 196 atcagtagcggttgcactcggcgggaagcccctgcgggaacctgtacccatcctcgcagt 255
           |||||| ||||  |||||||||||| || || |||||||||||  ||||||||| |||||
Sbjct: 936 atcagtggcgggcgcactcggcggggagtccttgcgggaacctccacccatcctggcagt 877

                                                                       
Query: 256 agttgtagcgcatgtaactgcgctccgcccacttcacggtgccccattcgtcgccgtcga 315
           |||||||||||||| |  |||||||||||||| | ||||||||||| ||| ||| ||| |
Sbjct: 876 agttgtagcgcatgaagttgcgctccgcccacctgacggtgccccactcggcgctgtcaa 817

                                                                       
Query: 316 gctgcttcctcatccacctgtcgctgccggcat---ggcacgcgccgccgctgacgcagg 372
           ||||| |  ||||||||| | ||||||||||     ||||||||||||||||||||||||
Sbjct: 816 gctgcctgttcatccacccgccgctgccggcggcccggcacgcgccgccgctgacgcagg 757

                                                                       
Query: 373 cgttggcgtagtagttgcggtaggagacgacgaatggcgcgttggaccagttgatcggga 432
           || ||||||||||| ||||||||||||||||||| ||||||| |||||||| |||   ||
Sbjct: 756 cgctggcgtagtagctgcggtaggagacgacgaagggcgcgtcggaccagtcgatgccga 697

                                        
Query: 433 tcttgcccttctcggtcgcccagtagctg 461
            | ||||||||||||| ||||||||||||
Sbjct: 696 ccctgcccttctcggtggcccagtagctg 668



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 47/52 (90%), Gaps = 1/52 (1%)
 Strand = Plus / Minus

                                                                
Query: 69   gctgtagggctgctttgtaatcacaaattcacaaaagaagaacaagaatcat 120
            |||| ||||||||||| ||||||||||| ||| |||||||| ||||||||||
Sbjct: 1045 gctgcagggctgctttttaatcacaaatccac-aaagaagagcaagaatcat 995
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>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1
           gene), cultivated variety W64A
          Length = 1225

 Score =  131 bits (66), Expect = 2e-27
 Identities = 179/216 (82%), Gaps = 3/216 (1%)
 Strand = Plus / Minus

                                                                       
Query: 249 tcgcagtagttgtagcgcatgtaactgcgctccgcccacttcacggtgccccattcgtcg 308
           |||||||||||||||||||||||  ||| ||| ||||||   ||||||||||| ||| ||
Sbjct: 887 tcgcagtagttgtagcgcatgtagttgctctcggcccaccggacggtgccccactcggcg 828

                                                                       
Query: 309 ccgtcgagctgcttcctcatccacctgtcg---ctgccggcatggcacgcgccgccgctg 365
            ||||| ||||||| |||||||||| ||||   | |||| |   ||| || |||||||||
Sbjct: 827 tcgtcgggctgcttgctcatccacccgtcgtcgccgccgccgccgcaggccccgccgctg 768

                                                                       
Query: 366 acgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgcgttggaccagttg 425
           ||||||||||||||| |||||   ||||||||||||||||| ||||||  ||||||||  
Sbjct: 767 acgcaggcgttggcggagtagccccggtaggagacgacgaagggcgcggcggaccagtcc 708

                                               
Query: 426 atcgggatcttgcccttctcggtcgcccagtagctg 461
           |  || | ||||||||||||||| ||||||||||||
Sbjct: 707 acgggcaccttgcccttctcggtggcccagtagctg 672
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>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence
          Length = 1156

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 367 cgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgcgttggaccagttga 426
           ||||||||||||||  |||||  ||||||||||||||||| |||||| ||||||||| ||
Sbjct: 622 cgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtcga 563

             
Query: 427 tc 428
           ||
Sbjct: 562 tc 561
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>gb|AY105107.1| Zea mays PCO140468 mRNA sequence
          Length = 1297

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 367 cgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgcgttggaccagttga 426
           ||||||||||||||  |||||  ||||||||||||||||| |||||| ||||||||| ||
Sbjct: 786 cgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtcga 727

             
Query: 427 tc 428
           ||
Sbjct: 726 tc 725
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>gb|AY104207.1| Zea mays PCO111099 mRNA sequence
          Length = 1202

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 389 gcggtaggagacgacgaatggcgcgttggaccagt 423
           |||||||||| ||||||| ||||||||||||||||
Sbjct: 719 gcggtaggaggcgacgaagggcgcgttggaccagt 685
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>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 366 acgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgcgttggaccagt 423
           |||||||||| |||| |||||  ||||||||||||| |||| ||||||  ||||||||
Sbjct: 328 acgcaggcgtcggcggagtagccgcggtaggagacggcgaagggcgcggcggaccagt 271



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 196 atcagtagcggttgcactcggcgggaagcccctgcgggaacctgtacccatcctcgcagt 255
           |||||| ||||  |||||||||||| |  ||||||||||| |   | || || |||||||
Sbjct: 513 atcagttgcgggagcactcggcggggaagccctgcgggaatcgccagccgtcgtcgcagt 454

                           
Query: 256 agttgtagcgcatgta 271
           |||||||| |||||||
Sbjct: 453 agttgtagtgcatgta 438
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>gb|AY107002.1| Zea mays PCO111646 mRNA sequence
          Length = 776

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 60/70 (85%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 393 taggagacgacgaatggcgcgttggaccagttgatcgggatcttgcccttctcggtcg-c 451
           |||||||||||||| ||||||  ||||||||  | ||| | ||||||||||||||| | |
Sbjct: 767 taggagacgacgaagggcgcggcggaccagtccaccggcaccttgcccttctcggtggcc 708

                     
Query: 452 ccagtagctg 461
           ||||||||||
Sbjct: 707 ccagtagctg 698
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>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 366 acgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgcgttggaccagt 423
           |||||||||| |||| |||||  ||||||||||||| |||| ||||||  ||||||||
Sbjct: 806 acgcaggcgtcggcggagtagccgcggtaggagacggcgaagggcgcggcggaccagt 749



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 196 atcagtagcggttgcactcggcgggaagcccctgcgggaacctgtacccatcctcgcagt 255
           |||||| ||||  |||||||||||| |  ||||||||||| |   | || || |||||||
Sbjct: 991 atcagttgcgggagcactcggcggggaagccctgcgggaagcgccagccgtcgtcgcagt 932

                           
Query: 256 agttgtagcgcatgta 271
           |||||||| |||||||
Sbjct: 931 agttgtagtgcatgta 916
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>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 364 tgacgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgc 412
           |||||||||||| ||||| | |||||||| ||||| ||||||| |||||
Sbjct: 770 tgacgcaggcgtcggcgttgaagttgcggaaggaggcgacgaacggcgc 722
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>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 364 tgacgcaggcgttggcgtagtagttgcggtaggagacgacgaatggcgc 412
           |||||||||||| ||||| | |||||||| ||||| ||||||| |||||
Sbjct: 664 tgacgcaggcgtcggcgttgaagttgcggaaggaggcgacgaacggcgc 616
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>ref|XM_629286.1| Dictyostelium discoideum putative cation-transporting ATPase
            (DDB0215381), partial mRNA
          Length = 3897

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 98   cacaaaagaagaacaagaatcat 120
            |||||||||||||||||||||||
Sbjct: 1881 cacaaaagaagaacaagaatcat 1903
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>gb|AF238314.1|AF238314 Dictyostelium discoideum putative cation-transporting ATPase CtaA
            (ctaA) gene, partial cds
          Length = 4711

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 98   cacaaaagaagaacaagaatcat 120
            |||||||||||||||||||||||
Sbjct: 1699 cacaaaagaagaacaagaatcat 1721
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>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA,
           complete cds
          Length = 1107

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 194 ggatcagtagcggttgcactcggcggg 220
           |||||||| ||||||||||||||||||
Sbjct: 905 ggatcagttgcggttgcactcggcggg 879
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>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA,
           complete cds
          Length = 958

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 194 ggatcagtagcggttgcactcggcggg 220
           |||||||| ||||||||||||||||||
Sbjct: 905 ggatcagttgcggttgcactcggcggg 879
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>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of
              3 of the complete sequence
          Length = 209806

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 78     ctgctttgtaatcacaaattca 99
              ||||||||||||||||||||||
Sbjct: 158501 ctgctttgtaatcacaaattca 158480
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>emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chromosome 13 Contains
            the 5' end of the FGF14 gene for fibroblast growth factor
            14, a lipoyltransferase (LOC51601) pseudogene and a CpG
            island, complete sequence
          Length = 188696

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 78   ctgctttgtaatcacaaattca 99
            ||||||||||||||||||||||
Sbjct: 9401 ctgctttgtaatcacaaattca 9380
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>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein
          Length = 1189

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 366 acgcaggcgttggcgtagtagttgcggtaggagacgacgaa 406
           |||||| ||||||||| ||||  |||||||||||| |||||
Sbjct: 728 acgcagccgttggcgtggtaggcgcggtaggagaccacgaa 688
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>ref|XM_729123.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403990.00.0)
           partial mRNA
          Length = 423

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 91  acaaattcacaaaagaagaacaaga 115
           |||||||||||||| ||||||||||
Sbjct: 191 acaaattcacaaaaaaagaacaaga 215
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>ref|XM_737252.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000365.05.0)
           partial mRNA
          Length = 2067

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 91  acaaattcacaaaagaagaacaaga 115
           |||||||||||||| ||||||||||
Sbjct: 521 acaaattcacaaaaaaagaacaaga 545
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>gb|AC154188.2| Mus musculus BAC clone RP24-455C11 from chromosome 16, complete
             sequence
          Length = 177978

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   aaaggtagtatcaatgtcaac 157
             |||||||||||||||||||||
Sbjct: 45329 aaaggtagtatcaatgtcaac 45309
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 356     gccgccgctgacgcaggcgttggcg 380
               |||| ||||||||||||||||||||
Sbjct: 2168996 gccgtcgctgacgcaggcgttggcg 2168972
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>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16, complete
              sequence
          Length = 170444

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 137    aaaggtagtatcaatgtcaac 157
              |||||||||||||||||||||
Sbjct: 132980 aaaggtagtatcaatgtcaac 132960
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     ttcacaaaagaagaacaagaa 116
              |||||||||||||||||||||
Sbjct: 268442 ttcacaaaagaagaacaagaa 268422



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     ttcacaaaagaagaacaagaa 116
              |||||||||||||||||||||
Sbjct: 262505 ttcacaaaagaagaacaagaa 262485
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>ref|XM_656241.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3729.2), mRNA
          Length = 5718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   caaattcacaaaagaagaac 111
            ||||||||||||||||||||
Sbjct: 3117 caaattcacaaaagaagaac 3136
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>ref|XM_389169.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein
          (FG08993.1) partial mRNA
          Length = 2784

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 71 tgtagggctgctttgtaatcacaa 94
          |||| |||||||||||||||||||
Sbjct: 77 tgtatggctgctttgtaatcacaa 54
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>gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence
          Length = 197860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     aaaatttacatgcttctttcttta 28
             ||||||| ||||||||||||||||
Sbjct: 10181 aaaattttcatgcttctttcttta 10204
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>emb|Z70232.1|HSU139A4 Human DNA sequence from clone LL0XNC01-139A4 on chromosome X,
            complete sequence
          Length = 34162

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  tgcttcctcatccacctgtc 337
            ||||||||||||||||||||
Sbjct: 6163 tgcttcctcatccacctgtc 6144
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 428    cgggatcttgcccttctcgg 447
              ||||||||||||||||||||
Sbjct: 789546 cgggatcttgcccttctcgg 789527
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>gb|AF229281.1| Amblyolepis setigera internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 645

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  gctgctttgtaatcacaaat 96
           ||||||||||||||||||||
Sbjct: 243 gctgctttgtaatcacaaat 262
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>gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 180388

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     cacacattgctgtagggctg 80
              ||||||||||||||||||||
Sbjct: 114782 cacacattgctgtagggctg 114801
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>gb|AC106798.3| Homo sapiens chromosome 5 clone RP11-434D9, complete sequence
          Length = 172966

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     cacaaattcacaaaagaaga 109
              ||||||||||||||||||||
Sbjct: 147441 cacaaattcacaaaagaaga 147460
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>gb|AC112206.3| Homo sapiens chromosome 5 clone RP11-83M16, complete sequence
          Length = 185290

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    cacaaattcacaaaagaaga 109
             ||||||||||||||||||||
Sbjct: 46887 cacaaattcacaaaagaaga 46906
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>ref|XM_631572.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0188014),
           partial mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 93  aaattcacaaaagaagaacaagaa 116
           |||||||||||||||||| |||||
Sbjct: 61  aaattcacaaaagaagaaaaagaa 84
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       tgtaatcacaaattcacaaa 103
                ||||||||||||||||||||
Sbjct: 40715849 tgtaatcacaaattcacaaa 40715868
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>gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, complete sequence
          Length = 171477

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 316   gctgcttcctcatccacctgtcgctgcc 343
             |||||||||||||||| ||||| |||||
Sbjct: 67493 gctgcttcctcatccatctgtctctgcc 67520
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     tgtaatcacaaattcacaaa 103
              ||||||||||||||||||||
Sbjct: 157827 tgtaatcacaaattcacaaa 157846
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>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0052O12
          Length = 167881

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tgtaatcacaaattcacaaa 103
             ||||||||||||||||||||
Sbjct: 18495 tgtaatcacaaattcacaaa 18514
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>dbj|AK120714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A11, full
            insert sequence
          Length = 2214

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   tgtaatcacaaattcacaaa 103
            ||||||||||||||||||||
Sbjct: 2109 tgtaatcacaaattcacaaa 2090
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>gb|AC131231.10| Mus musculus chromosome 19, clone RP24-395L19, complete sequence
          Length = 181700

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     aaaatttacatgcttctttcttta 28
             ||||||| ||||||||||||||||
Sbjct: 21002 aaaattttcatgcttctttcttta 20979
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>gb|U51272.1|ENU51272 Emericella nidulans putative 1,3-beta-D-glucan synthase catalytic
            subunit (fksA) gene, complete cds
          Length = 6706

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   caaattcacaaaagaagaac 111
            ||||||||||||||||||||
Sbjct: 3843 caaattcacaaaagaagaac 3862


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,787,562
Number of Sequences: 3902068
Number of extensions: 3787562
Number of successful extensions: 77933
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77756
Number of HSP's gapped (non-prelim): 173
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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