Clone Information

BLAST Search Result

Clone Name	rbart22g02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AF174004.1\|AF174004 Triticum aestivum alternative oxidase mRN...	426	e-116
2	dbj\|AB078882.1\| Triticum aestivum mRNA for alternative oxidase, ...	268	1e-68
3	dbj\|AK064040.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	139	8e-30
4	dbj\|AB007452.1\| Oryza sativa mRNA for alternative oxidase, compl...	139	8e-30
5	dbj\|AB004864.1\| Oryza sativa (japonica cultivar-group) AOX1a mRN...	139	8e-30
6	ref\|XM_473757.1\| Oryza sativa (japonica cultivar-group), predic...	135	1e-28
7	gb\|AY644465.1\| Saccharum officinarum mitochondrial alternative o...	127	3e-26
8	dbj\|AB189673.1\| Dracunculus vulgaris DvAOX mRNA for alternative ...	125	1e-25
9	gb\|AY059647.1\| Zea mays alternative oxidase AOX2 precursor (Aox2...	115	1e-22
10	gb\|AY108791.1\| Zea mays PCO108471 mRNA sequence	115	1e-22
11	gb\|AY644466.1\| Saccharum officinarum mitochondrial alternative o...	100	7e-18
12	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	98	3e-17
13	dbj\|AB004813.1\| Oryza sativa (japonica cultivar-group) AOX1b and...	98	3e-17
14	emb\|AL606683.3\|OSJN00089 Oryza sativa genomic DNA, chromosome 4,...	98	3e-17
15	gb\|M60330.1\|SURAOX1A S.guttatum aox1 mRNA encoding an alternativ...	96	1e-16
16	gb\|AY644468.1\| Saccharum officinarum mitochondrial alternative o...	94	5e-16
17	gb\|AY059648.1\| Zea mays alternative oxidase AOX3 precursor (Aox3...	94	5e-16
18	gb\|AY485264.1\| Zea mays alternative oxidase 1a (Aox1a) gene, com...	90	7e-15
19	emb\|Z15117.1\|SGAOX1G S.guttatum aox1 gene for salicylic acid-ind...	80	7e-12
20	dbj\|AB078883.1\| Triticum aestivum mRNA for alternative oxidase, ...	80	7e-12
21	ref\|XM_467319.1\| Oryza sativa (japonica cultivar-group), mRNA	78	3e-11
22	dbj\|AB074005.1\| Oryza sativa (japonica cultivar-group) mitochond...	78	3e-11
23	dbj\|AB097429.1\| Oryza sativa (japonica cultivar-group) transposo...	76	1e-10
24	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
25	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
26	dbj\|AP004778.3\| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
27	dbj\|AP003994.3\| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
28	dbj\|AP002854.2\| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
29	dbj\|AB074004.1\| Oryza sativa (japonica cultivar-group) mitochond...	76	1e-10
30	ref\|XM_473758.1\| Oryza sativa (japonica cultivar-group), predic...	72	2e-09
31	ref\|XM_473445.1\| Oryza sativa (japonica cultivar-group), predic...	72	2e-09
32	gb\|AY644467.1\| Saccharum officinarum mitochondrial alternative o...	72	2e-09
33	dbj\|AB183695.1\| Symplocarpus foetidus SfAOX mRNA for skunk cabba...	72	2e-09
34	dbj\|AB190213.1\| Philodendron bipinnatifidum PsAOX mRNA for alter...	72	2e-09
35	dbj\|AK107376.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	72	2e-09
36	dbj\|AB004865.1\| Oryza sativa (japonica cultivar-group) AOX1b mRN...	72	2e-09
37	ref\|NM_194839.1\| Oryza sativa (japonica cultivar-group) putative...	70	7e-09
38	emb\|AL606633.3\|OSJN00060 Oryza sativa genomic DNA, chromosome 4,...	70	7e-09
39	dbj\|AB097431.1\| Oryza sativa (japonica cultivar-group) transposo...	70	7e-09
40	gb\|AY059646.1\| Zea mays alternative oxidase AOX1 precursor (Aox1...	70	7e-09
41	gb\|AC135423.2\| Oryza sativa (japonica cultivar-group) chromosome...	68	3e-08
42	gb\|AC121364.2\| Oryza sativa (japonica cultivar-group) chromosome...	68	3e-08
43	dbj\|AB097428.1\| Oryza sativa (japonica cultivar-group) transposo...	68	3e-08
44	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	68	3e-08
45	dbj\|AB097430.1\| Oryza sativa (japonica cultivar-group) transposo...	66	1e-07
46	gb\|AC074105.3\| Oryza sativa chromosome 10 clone OSJNBa0030B02, c...	66	1e-07
47	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	66	1e-07
48	dbj\|AP004024.3\| Oryza sativa (japonica cultivar-group) genomic D...	66	1e-07
49	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	66	1e-07
50	gb\|AY422689.1\| Nicotiana attenuata tissue-type shoot mitochondri...	52	0.002
51	gb\|AY422688.1\| Nicotiana attenuata tissue-type shoot mitochondri...	46	0.095
52	gb\|DQ100441.1\| Vigna unguiculata mitochondrial alternative oxida...	44	0.37
53	gb\|CP000248.1\| Novosphingobium aromaticivorans DSM 12444, comple...	44	0.37
54	gb\|S71335.1\| Aox1=alternative oxidase {alternative pathway} [Nic...	44	0.37
55	emb\|AJ538951.1\|NTA538951 Nicotiana tabacum cDNA-AFLP-fragment BT...	44	0.37
56	emb\|AJ718098.1\| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-24-60...	44	0.37
57	emb\|AJ489270.1\|CSA489270 Crocus sativus partial mRNA for alterna...	42	1.5
58	gb\|AC122451.3\| Mus musculus BAC clone RP24-252G15 from 16, compl...	40	5.8
59	ref\|XM_644660.1\| Entamoeba histolytica HM-1:IMSS hypothetical pr...	40	5.8
60	emb\|CR407594.22\| Zebrafish DNA sequence from clone DKEY-122C11 i...	40	5.8
61	gb\|AC161457.5\| Mus musculus BAC clone RP23-156A3 from chromosome...	40	5.8
62	gb\|DQ100440.1\| Vigna unguiculata mitochondrial alternative oxida...	40	5.8
63	gb\|AC093151.2\| Homo sapiens chromosome 1 clone RP11-399E6, compl...	40	5.8
64	gb\|AC013799.6\| Homo sapiens, clone RP11-20J1, complete sequence	40	5.8
65	gb\|CP000232.1\| Moorella thermoacetica ATCC 39073, complete genome	40	5.8
66	emb\|X79768.1\|NTSR1AOX N.tabacum (SR1) aox mRNA	40	5.8
67	dbj\|AB055060.1\| Catharanthus roseus gene for alternative oxidase...	40	5.8

>gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRNA, partial cds; nuclear gene
            for mitochondrial product
          Length = 1100

 Score =  426 bits (215), Expect = e-116
 Identities = 330/362 (91%), Gaps = 16/362 (4%)
 Strand = Plus / Minus

                                                                        
Query: 86   tggcgtaagccaaataggttcatctttga--gcgaaatggtggttcaacaatatcctag- 142
            ||||||| |||||||||||||||||| ||  |||||| ||||||||||||||||||||  
Sbjct: 1069 tggcgtacgccaaataggttcatcttagatagcgaaacggtggttcaacaatatcctaat 1010

                                                                        
Query: 143  atacgtaactgacaagcacactgcttatttctcagtactcgatagttaccaaaggagcaa 202
            ||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||||
Sbjct: 1009 atacgcaactgacaagcacactgattatttctcagtactgaatagttaccaaaggagcaa 950

                                                                        
Query: 203  caattgcgacatcctatacagctaaaga--gccctcatttcctcggaagccttc-aaaac 259
            ||||||| ||||||||||||||||||||  || ||||||||||| |   ||||| |||||
Sbjct: 949  caattgcaacatcctatacagctaaagatagctctcatttcctctg---ccttccaaaac 893

                                                                        
Query: 260  gaaacactcatttgcttggtagtagtag------cgatgcaaaattcagcagaagacggc 313
            |||||||||||||||||||| |||||||      |||||||||| ||||||||| |||||
Sbjct: 892  gaaacactcatttgcttggtggtagtagtagcagcgatgcaaaactcagcagaacacggc 833

                                                                        
Query: 314  caagcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagta 373
            || |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 832  ca-gcctcagtggtatccgatcggcgctggggtggccttcagctgcataccctggtagta 774

                                                                        
Query: 374  cacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggt 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  cacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggt 714

              
Query: 434  ga 435
            ||
Sbjct: 713  ga 712

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>dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1119

 Score =  268 bits (135), Expect = 1e-68
 Identities = 177/191 (92%), Gaps = 10/191 (5%)
 Strand = Plus / Minus

                                                                        
Query: 254  caaaacgaaacactcatttgcttggt---------agtagtagcgatgcaaaattcagca 304
            ||||||||||||||||||||||||||         |||||||||| ||||||||||||||
Sbjct: 1096 caaaacgaaacactcatttgcttggtggtagtagcagtagtagcgttgcaaaattcagca 1037

                                                                        
Query: 305  gaagacggccaagcctcagtggtatccgatcggcgccggggtggccttcagctccatacc 364
            ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1036 gaacacggcca-gcctcagtggtatccgatcggcgccggggtggccttcagctgcatacc 978

                                                                        
Query: 365  ctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  ctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 918

                       
Query: 425  caccacggtga 435
             ||||||||||
Sbjct: 917  gaccacggtga 907

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>dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C12, full
            insert sequence
          Length = 1471

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1104 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1045

                                                                      
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1044 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 987



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 1207 atccgatacagctaaagagctctcattt 1180

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>dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, complete cds
          Length = 1256

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1085 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1026

                                                                      
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1025 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 968



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 1188 atccgatacagctaaagagctctcattt 1161

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>dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRNA for alternative
            oxidase, complete cds
          Length = 1459

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1092 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1033

                                                                      
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1032 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 975



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 1195 atccgatacagctaaagagctctcattt 1168

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>ref|XM_473757.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 999

 Score =  135 bits (68), Expect = 1e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 320 tcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtc 379
           |||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |||
Sbjct: 999 tcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatgtc 940

                                                                   
Query: 380 cgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
           |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 939 cgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 884

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>gb|AY644465.1| Saccharum officinarum mitochondrial alternative oxidase 1 mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1316

 Score =  127 bits (64), Expect = 3e-26
 Identities = 106/120 (88%)
 Strand = Plus / Minus

                                                                        
Query: 316  agcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtaca 375
            ||||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  |
Sbjct: 1096 agcctcagtggtatccgatcggcgcaggggactgcttcagctgcatgccctggcaatgga 1037

                                                                        
Query: 376  cgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
             ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1036 tgtccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 977

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>dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative oxidase, complete cds
          Length = 1372

 Score =  125 bits (63), Expect = 1e-25
 Identities = 105/119 (88%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacac 376
            |||||||||||| |||| ||||||||| || | ||||||||| | |||||||||||  ||
Sbjct: 1153 gcctcagtggtacccgagcggcgccggcgtcgtcttcagctcaagaccctggtagtggac 1094

                                                                       
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            ||| || |||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 1093 gtcggaggcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacggtga 1035

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>gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds~~
          Length = 1456

 Score =  115 bits (58), Expect = 1e-22
 Identities = 103/118 (87%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            ||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  | |
Sbjct: 1099 cctcagtggtatccgatcggcgcaggggactgcttcagctgcattccctggcaatggatg 1040

                                                                      
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 1039 tccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtga 982

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>gb|AY108791.1| Zea mays PCO108471 mRNA sequence
          Length = 1415

 Score =  115 bits (58), Expect = 1e-22
 Identities = 103/118 (87%)
 Strand = Plus / Minus

                                                                        
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 377
            ||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  | |
Sbjct: 1113 cctcagtggtatccgatcggcgcaggggactgcttcagctgcattccctggcaatggatg 1054

                                                                      
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 1053 tccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtga 996

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>gb|AY644466.1| Saccharum officinarum mitochondrial alternative oxidase 1b mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 989

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 92/106 (86%)
 Strand = Plus / Minus

                                                                       
Query: 322 agtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtccg 381
           ||||||| ||||  ||||| || ||| ||||||||| ||| |||||||| |  | |||||
Sbjct: 875 agtggtacccgagaggcgcaggcgtgtccttcagcttcatcccctggtaatgaatgtccg 816

                                                         
Query: 382 atgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcac 427
           |||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 815 atgcgaagtggttgacatcgcggtggtgcgcctcgtcggcgcgcac 770

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
                ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 30321728 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 30321784



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                           
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 421
                |||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 27704187 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggc 27704145



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
                |||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 30325836 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcg 30325881



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 318      cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 370
                |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 30321565 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 30321617



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 213      atcctatacagctaaagagccctcattt 240
                |||| ||||||||||||||| |||||||
Sbjct: 30321462 atccgatacagctaaagagctctcattt 30321489

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>dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and AOX1a genes,
            complete cds
          Length = 7421

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                     
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6561 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 6505



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 2453 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcg 2408



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 318  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 370
            |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 6724 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 6672



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  atcctatacagctaaagagccctcattt 240
            |||| ||||||||||||||| |||||||
Sbjct: 6827 atccgatacagctaaagagctctcattt 6800

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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
             complete sequence
          Length = 160989

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                      
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
             ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 71624 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 71680



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
             |||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 75732 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcg 75777



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 318   cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 370
             |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 71461 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 71513



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 213   atcctatacagctaaagagccctcattt 240
             |||| ||||||||||||||| |||||||
Sbjct: 71358 atccgatacagctaaagagctctcattt 71385

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>gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternative oxidase protein
          Length = 1404

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 320  tcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtc 379
            ||||||||| |||| ||||||||| || | ||||||||| | | ||||||| |  |||||
Sbjct: 1123 tcagtggtacccgagcggcgccggcgtcgtcttcagctcaagatcctggtaatggacgtc 1064

                                                                    
Query: 380  cgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
             || |||||||||||||||||||||||||| |||||||| ||||| || |||||||
Sbjct: 1063 ggaggcgaagtggttgacgtcgcggtggtgtgcctcgtctgcgcggacgacggtga 1008

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>gb|AY644468.1| Saccharum officinarum mitochondrial alternative oxidase 1d mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1108

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
           |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 823 gtccgacgcgaagtggttgacgtcgcggtggtgcgcctcgtcggcgcgcacgacggtga 765

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>gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds~~
          Length = 1397

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                       
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1101 gtccgacgcgaagtggttgacgtcgcggtggtgcgcctcgtcggcgcgcacgacggtga 1043

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>gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, complete cds
          Length = 3361

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 2887 ccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtga 2831



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 318  cctcagtggtatccgatcggcgccgggg 345
            ||||||||||||||||||||||| ||||
Sbjct: 3050 cctcagtggtatccgatcggcgcagggg 3023

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>emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-inducible alternative oxidase
          Length = 3584

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                
Query: 384  gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 2806 gcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacggtga 2755

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>dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1136

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                
Query: 384  gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 435
            |||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 1048 gcgaagtggttgacatcgcggtggtgcgcctcgtcggcgcgcacgacggtga 997

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>ref|XM_467319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 378 tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
           ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 980 tccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcg 934

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>dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c mRNA for
            alternative oxidase 1c, complete cds
          Length = 1088

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                           
Query: 378  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1013 tccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcg 967

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>dbj|AB097429.1| Oryza sativa (japonica cultivar-group) transposon AnacA2(AOX) DNA,
            complete sequence
          Length = 2164

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                          
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1186 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg 1141

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                             
Query: 379     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
               |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 3654211 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg 3654256

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
                |||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 28831344 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcg 28831389



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                     
Query: 388      agtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
                |||||||||||||||||||||| ||||||||||||||
Sbjct: 12646581 agtggttgacgtcgcggtggtgggcctcgtcggcgcg 12646545

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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0459B01
          Length = 163087

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                            
Query: 379    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
              |||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 147917 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcg 147962

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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_E07
          Length = 123613

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
             |||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 24036 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcg 24081

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>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
             |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 48439 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg 48484

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>dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c gene for
            alternative oxidase 1c, complete cds
          Length = 2674

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                          
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1753 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcg 1708

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>ref|XM_473758.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
           |||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 951 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcg 904

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>ref|XM_473445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 378 tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 421
           ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 320 tccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggc 277

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>gb|AY644467.1| Saccharum officinarum mitochondrial alternative oxidase 1c mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1189

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                       
Query: 324 tggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtccgat 383
           |||||||| | |||||| || ||  |||| |||| |||||||||| | |  | |||||| 
Sbjct: 951 tggtatccaagcggcgcaggtgtctccttgagctgcataccctggaaatgaatgtccgac 892

                                                           
Query: 384 gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacg 431
           || ||||| ||||||||||||||||| |||||||||| ||||||||||
Sbjct: 891 gcaaagtgattgacgtcgcggtggtgcgcctcgtcggagcgcaccacg 844

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>dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabbage alternative
            oxidase, complete cds
          Length = 1233

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1095 gtccgaggcaaagtggttgacgtcgcggtggtgggcctcgtcggcgcg 1048

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>dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alternative oxidase,
            complete cds
          Length = 1283

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacac 376
            |||||||||||| || | |||||| || |  |||||||||||   ||| |||||||  | 
Sbjct: 1107 gcctcagtggtacccaagcggcgctggcgccgccttcagctcatgaccttggtagtggat 1048

                                                            
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            ||| || |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1047 gtcggaagcgaagtggttgacgtcgcggtggtgggcctcgtctgcgcg 1000

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>dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B09, full
            insert sequence
          Length = 1360

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 1098 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcg 1051

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>dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRNA for alternative
            oxidase, complete cds
          Length = 1343

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 1083 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcg 1036

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>ref|NM_194839.1| Oryza sativa (japonica cultivar-group) putative alternative oxidase
           (OSJNBa0030B02.13), mRNA
          Length = 732

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 357 tccataccctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcg 416
           ||||| |||||| | | ||| ||||||||||| |||||||||||||||||||| ||||| 
Sbjct: 695 tccatcccctggaaatgcacatccgatgcgaaatggttgacgtcgcggtggtgcgcctca 636

                  
Query: 417 tcggcgc 423
           |||||||
Sbjct: 635 tcggcgc 629

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>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
              complete sequence
          Length = 173522

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                         
Query: 379    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 421
              |||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 134813 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggc 134771

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>dbj|AB097431.1| Oryza sativa (japonica cultivar-group) transposon AnacA4(AOX) DNA,
            complete sequence
          Length = 2115

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 421
            |||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1144 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggc 1102

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>gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds
          Length = 1519

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 377  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacg 431
            |||||| || ||||| ||||||||||||||||| |||||||||| ||||||||||
Sbjct: 1110 gtccgacgcaaagtgattgacgtcgcggtggtgcgcctcgtcggagcgcaccacg 1056

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>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02,
            complete sequence
          Length = 147407

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 5229 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcg 5184

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>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0052E20, complete sequence
          Length = 162434

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 379   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
             |||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 46762 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcg 46717

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>dbj|AB097428.1| Oryza sativa (japonica cultivar-group) transposon AnacA1(AOX) DNA,
            complete sequence
          Length = 2105

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
            |||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 1129 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcg 1084

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 379      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
                |||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 22942749 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcg 22942704

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>dbj|AB097430.1| Oryza sativa (japonica cultivar-group) transposon AnacA3(AOX) DNA,
            complete sequence
          Length = 3051

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 379  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgc 423
            |||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 2068 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgc 2024

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>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence
          Length = 146836

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                           
Query: 379    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgc 423
              |||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 110474 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgc 110518

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                            
Query: 379     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgc 423
               |||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 2783698 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgc 2783742

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>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_B09
          Length = 105247

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                  
Query: 388   agtggttgacgtcgcggtggtgagcctcgtcggcgcg 424
             |||||||||||||||||||||| ||||||||||||||
Sbjct: 43640 agtggttgacgtcgcggtggtgggcctcgtcggcgcg 43604

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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                            
Query: 379     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgc 423
               |||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 2783649 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgc 2783693

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>gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
            oxidase (AOX2) mRNA, complete cds
          Length = 1278

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 381  gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
            ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1102 gatgcaaagtggttgacatcgcggtgatgagcctcgtc 1065

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>gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
            oxidase (AOX1) mRNA, complete cds
          Length = 1420

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 381  gatgcgaagtggttgacgtcgcggtggtgagcctc 415
            ||||| ||||||||||| |||||||| ||||||||
Sbjct: 1090 gatgcaaagtggttgacatcgcggtgatgagcctc 1056

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>gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxidase 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 951

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
           |||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 894 gtccgaagcaaagtggttgacatcacggtggtgtgcctcgtc 853

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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 389     gtggttgacgtcgcggtggtgagcctcgtc 418
               ||||||||||||||||||||| || |||||
Sbjct: 1631710 gtggttgacgtcgcggtggtgcgcttcgtc 1631739

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>gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nicotiana
            tabacum=tobacco, cv Bright Yellow, suspension cells,
            mRNA, 1408 nt]
          Length = 1408

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 381  gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
            ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 1071 gatgcaaagtggttgacatcacggtgatgagcctcgtc 1034

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>emb|AJ538951.1|NTA538951 Nicotiana tabacum cDNA-AFLP-fragment BT3-M24-001
          Length = 649

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 381 gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 555 gatgcaaagtggttgacatcacggtgatgagcctcgtc 518

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>emb|AJ718098.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-24-600, cultivar Bright
           Yellow 2
          Length = 637

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 381 gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 418
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 547 gatgcaaagtggttgacatcacggtgatgagcctcgtc 510

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>emb|AJ489270.1|CSA489270 Crocus sativus partial mRNA for alternative oxidase
          Length = 681

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 377 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 421
           |||||| || ||||| ||||||||||| || |||||||| |||||
Sbjct: 414 gtccgaagcaaagtgattgacgtcgcgatgatgagcctcatcggc 370

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>gb|AC122451.3| Mus musculus BAC clone RP24-252G15 from 16, complete sequence
          Length = 160256

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aaagaaaaggaacagtaata 23
             ||||||||||||||||||||
Sbjct: 39750 aaagaaaaggaacagtaata 39769

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>ref|XM_644660.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (274.t00013)
           partial mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 tcaaaacgaaacactcattt 272
           ||||||||||||||||||||
Sbjct: 204 tcaaaacgaaacactcattt 223

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>emb|CR407594.22| Zebrafish DNA sequence from clone DKEY-122C11 in linkage group 4,
             complete sequence
          Length = 160262

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   tagcgatgcaaaattcagca 304
             ||||||||||||||||||||
Sbjct: 20972 tagcgatgcaaaattcagca 20953

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>gb|AC161457.5| Mus musculus BAC clone RP23-156A3 from chromosome 16, complete sequence
          Length = 208176

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aaagaaaaggaacagtaata 23
              ||||||||||||||||||||
Sbjct: 169883 aaagaaaaggaacagtaata 169902

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>gb|DQ100440.1| Vigna unguiculata mitochondrial alternative oxidase 1 gene, complete
            cds; nuclear gene for mitochondrial product
          Length = 1543

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 387  aagtggttgacgtcgcggtggtgagcctcgtc 418
            ||||||||||| || |||||||| ||||||||
Sbjct: 1387 aagtggttgacatcacggtggtgtgcctcgtc 1356

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>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence
          Length = 188276

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    cgtaactgacaagcacactg 165
              ||||||||||||||||||||
Sbjct: 119899 cgtaactgacaagcacactg 119918

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>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence
          Length = 186076

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    tgtacatagtgaggtagatcaatg 62
             ||||||||||||||||||| ||||
Sbjct: 59591 tgtacatagtgaggtagatgaatg 59568

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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     cggcgccggggtggccttca 354
               ||||||||||||||||||||
Sbjct: 1721041 cggcgccggggtggccttca 1721022

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>emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 387 aagtggttgacgtcgcggtggtgagcctcgtc 418
           ||||||||||| || ||||| |||||||||||
Sbjct: 862 aagtggttgacatcacggtgatgagcctcgtc 831

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>dbj|AB055060.1| Catharanthus roseus gene for alternative oxidase, complete cds
          Length = 11471

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 388  agtggttgacgtcgcggtggtgagcctc 415
            ||||||| || |||||||||||||||||
Sbjct: 5510 agtggttaacatcgcggtggtgagcctc 5483


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,514,530
Number of Sequences: 3902068
Number of extensions: 3514530
Number of successful extensions: 170948
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 170624
Number of HSP's gapped (non-prelim): 316
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result