>GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 242 FVRSLR*KGSTLAIAVTVFSLLFWGHLSHREVIPVINLDLAPLA----WKIYSVLPSLLH 75
           F+R +  KGS     VT + +  W       ++PV+ + + PL     W +  V+ SLLH
Sbjct: 326 FIRLIMVKGSDYPEHVTEYGV-HWNFFFTLALVPVLAVGIRPLTQWLRWSVLGVIISLLH 384

Query: 74  ESYV 63
           + ++
Sbjct: 385 QLWL 388

>GRIPE_MOUSE (Q6GYP7) GTPase-activating RapGAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2035

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 170 GHLSHREVIPVINLDLAPLAWKIYSVLPSLLHESYVWHCAGLFLKSL 30
           GH S RE +  I      +  KI  +LP  +H+ + +H  GL LK L
Sbjct: 73  GHKSQREELDAILF----IFEKILQLLPERIHQRWQFHSIGLILKKL 115

>GRIPE_HUMAN (Q6GYQ0) GTPase-activating Rap/Ran-GAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2036

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 170 GHLSHREVIPVINLDLAPLAWKIYSVLPSLLHESYVWHCAGLFLKSL 30
           GH S RE +  I      +  KI  +LP  +H+ + +H  GL LK L
Sbjct: 73  GHKSQREELDAILF----IFEKILQLLPERIHQRWQFHSIGLILKKL 115

>GWT1_CRYNE (Q5KBA2) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -2

Query: 242 FVRSLR*KGSTLAIAVTVFSLLFWGHLSHREVIPVINLDLAPLA----WKIYSVLPSLLH 75
           F+R +  KGS     VT + +  W       ++PV+ + + PL     W +  V+ SLLH
Sbjct: 326 FIRLIMVKGSDYPEHVTEYGV-HWNFFFTLALVPVLAVGVRPLTQWLRWSVLGVIISLLH 384

Query: 74  E 72
           +
Sbjct: 385 Q 385

>CACB2_HUMAN (Q08289) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit) (Lambert-Eaton myasthenic syndrome antigen B)
           (MYSB)
          Length = 660

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 174 KQQAKHSNCNRERASFSSQGPDKLSDLPMGEWQCKSAC 287
           K QAKH N     A   +Q P +L D+ + E Q + AC
Sbjct: 413 KSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDAC 450

>CACB2_RABIT (P54288) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 632

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 174 KQQAKHSNCNRERASFSSQGPDKLSDLPMGEWQCKSAC 287
           K QAKH N     A   +Q P +L D+ + E Q + AC
Sbjct: 385 KSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDAC 422

>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 603

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 174 KQQAKHSNCNRERASFSSQGPDKLSDLPMGEWQCKSAC 287
           K QAKH N     A   +Q P +L D+ + E Q + AC
Sbjct: 358 KSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDAC 395

>PRP2_BOVIN (P12401) Placental prolactin-related protein 2 precursor (PRC-II)|
           (bPRCII)
          Length = 267

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -3

Query: 226 DEKEARSRLQLLCLAC--CFGVTCP 158
           D +EAR++ +LL L C  C G++CP
Sbjct: 45  DRREARAQPRLLVLGCLLCQGISCP 69

>HD_RAT (P51111) Huntingtin (Huntington disease protein homolog) (HD protein)|
          Length = 3110

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 12/80 (15%)
 Frame = -2

Query: 221  KGSTLAIAVTVFSLLFWGHLSHREVIPVINLDL------------APLAWKIYSVLPSLL 78
            +G T+   V     L W HL H ++   ++LDL             P  W + S    + 
Sbjct: 2216 EGHTVKFVVMTLEALSW-HLIHEQI--PLSLDLQAGLDCCCLALQVPGLWGVLSSPEYVT 2272

Query: 77   HESYVWHCAGLFLKSLPVSP 18
            H   + HC    L+++ V P
Sbjct: 2273 HTCSLIHCVRFILEAIAVQP 2292

>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD protein)|
          Length = 3119

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 12/80 (15%)
 Frame = -2

Query: 221  KGSTLAIAVTVFSLLFWGHLSHREVIPVINLDL------------APLAWKIYSVLPSLL 78
            +G T+   V     L W HL H ++   ++LDL             P  W + S    + 
Sbjct: 2225 EGDTVKFVVMTVEALSW-HLIHEQI--PLSLDLQAGLDCCCLALQVPGLWGVLSSPEYVT 2281

Query: 77   HESYVWHCAGLFLKSLPVSP 18
            H   + HC    L+++ V P
Sbjct: 2282 HACSLIHCVRFILEAIAVQP 2301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,762,329
Number of Sequences: 219361
Number of extensions: 801048
Number of successful extensions: 1857
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)