>ZDH20_MOUSE (Q5Y5T1) Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 20) (DHHC-20)
          Length = 380

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -3

Query: 144 CCVRCVTWSALPFPTFIFASYSTLHYHLGLCVSLFVRVG 28
           CC R V W  + F TF+   +S   Y + LCVS   R G
Sbjct: 9   CCQRVVGWVPVLFITFVVV-WSYYAYVVELCVSTISRTG 46

>AGL11_ARATH (Q38836) Agamous-like MADS-box protein AGL11|
          Length = 230

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 401 TKAKLFRRFHQHHHAHDSENEVDEVEELARK 309
           TK     R+ QHHH   S +E++ +E LA +
Sbjct: 169 TKVAEVERYQQHHHQMVSGSEINAIEALASR 199

>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.3)
           (Calcium channel, L type, alpha-1 polypeptide, isoform
           2) (RAT brain class D) (RBD)
          Length = 2203

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 364 WCWWKRRNSFAFVPS 408
           WCWWKRR +    PS
Sbjct: 493 WCWWKRRGAAKTGPS 507

>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9|
          Length = 728

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
 Frame = -2

Query: 178 PAAG*FTLVINLLCAMRDVERSAIS--YLYFCFVFHITLPLGFMC*FICE---------- 35
           P A  FTL++ +L  +  ++  A S  YL FC VF +   L  +  F+ +          
Sbjct: 93  PIATGFTLILTVLAMLAHIQGPASSSRYLLFCLVFSLPTFLLVLLSFLVDILLFVPHLDW 152

Query: 34  -GWEIIRAAV 8
            GW ++ A +
Sbjct: 153 GGWIVLAATI 162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,154,378
Number of Sequences: 219361
Number of extensions: 786678
Number of successful extensions: 2767
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)