Clone Name | rbart22f08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_481225.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1211 Score = 262 bits (132), Expect = 1e-66 Identities = 303/360 (84%) Strand = Plus / Minus Query: 150 ttacagatacttgatgaggagccagacaataaccacaagcatcactataccgacggtgga 209 ||||| ||||||||| || ||||| || ||||| |||| |||||||| ||||| || Sbjct: 973 ttacatatacttgataagaagccacacgataacagcaaggatcactattgcgacgacaga 914 Query: 210 cagcagcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcct 269 ||||||||| ||||||| |||||||| || |||| |||||||||||| | |||||||| Sbjct: 913 tagcagcaggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcct 854 Query: 270 cttttgcacacgctggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaat 329 ||||||||||||||| || |||||||||||| |||| ||||| || || | ||||||||| Sbjct: 853 cttttgcacacgctgaagacgcgagtttgtaacatcaacatgatcttccaagtcatcaat 794 Query: 330 cagtcttgcatgtaggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcag 389 || ||| | ||| ||| | | || ||||||||||| | |||| ||||||| ||||| Sbjct: 793 caatctcgtatgcagggtaagttcttcattgactgctaaagcgatatgttttgtactcag 734 Query: 390 cactgtctgctccagcttctcaaggccctcatcttgttctttcatgatttgcctctgaag 449 ||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 733 gactgtctcttccagcttctcaagaccttcatcttgttctttcataatttgcctctgaag 674 Query: 450 gccaacaatcccttggttatccaacccagccactctgctcatgtcatcagcagctttctt 509 |||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 673 gccaacaatcccttggttatccaaaccagcaactctgctcatatcatcagctgccttctt 614
>dbj|AK072643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F24, full insert sequence Length = 1212 Score = 262 bits (132), Expect = 1e-66 Identities = 303/360 (84%) Strand = Plus / Minus Query: 150 ttacagatacttgatgaggagccagacaataaccacaagcatcactataccgacggtgga 209 ||||| ||||||||| || ||||| || ||||| |||| |||||||| ||||| || Sbjct: 973 ttacatatacttgataagaagccacacgataacagcaaggatcactattgcgacgacaga 914 Query: 210 cagcagcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcct 269 ||||||||| ||||||| |||||||| || |||| |||||||||||| | |||||||| Sbjct: 913 tagcagcaggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcct 854 Query: 270 cttttgcacacgctggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaat 329 ||||||||||||||| || |||||||||||| |||| ||||| || || | ||||||||| Sbjct: 853 cttttgcacacgctgaagacgcgagtttgtaacatcaacatgatcttccaagtcatcaat 794 Query: 330 cagtcttgcatgtaggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcag 389 || ||| | ||| ||| | | || ||||||||||| | |||| ||||||| ||||| Sbjct: 793 caatctcgtatgcagggtaagttcttcattgactgctaaagcgatatgttttgtactcag 734 Query: 390 cactgtctgctccagcttctcaaggccctcatcttgttctttcatgatttgcctctgaag 449 ||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 733 gactgtctcttccagcttctcaagaccttcatcttgttctttcataatttgcctctgaag 674 Query: 450 gccaacaatcccttggttatccaacccagccactctgctcatgtcatcagcagctttctt 509 |||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 673 gccaacaatcccttggttatccaaaccagcaactctgctcatatcatcagctgccttctt 614
>ref|XM_463898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1049 Score = 222 bits (112), Expect = 9e-55 Identities = 337/412 (81%) Strand = Plus / Minus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 901 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 842 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 841 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 782 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 781 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 722 Query: 283 tggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatcagtcttgcatgt 342 || || || ||||||||| |||| |||| || || | |||||||||| ||||| ||| Sbjct: 721 tgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaatcaatcttgtatgc 662 Query: 343 aggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctcc 402 ||| | | || ||||||||||| || || | ||||||| |||||| ||||||| ||| Sbjct: 661 agggtaagttcttcattgactgctagagcaatatgttttgtgctcagtactgtctcttcc 602 Query: 403 agcttctcaaggccctcatcttgttctttcatgatttgcctctgaaggccaacaatccct 462 ||||||||||| |||||||||||||||||||| | |||||||||||| ||| || ||| Sbjct: 601 agcttctcaagaccctcatcttgttctttcataacttgcctctgaagtgaaacgattcct 542 Query: 463 tggttatccaacccagccactctgctcatgtcatcagcagctttcttactct 514 ||||||||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 541 tggttatccaaaccagctactctactcatatcatcagctgctttcttactct 490
>ref|XM_506688.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1217_F02.19 mRNA Length = 1130 Score = 222 bits (112), Expect = 9e-55 Identities = 337/412 (81%) Strand = Plus / Minus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 891 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 832 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 831 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 772 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 771 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 712 Query: 283 tggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatcagtcttgcatgt 342 || || || ||||||||| |||| |||| || || | |||||||||| ||||| ||| Sbjct: 711 tgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaatcaatcttgtatgc 652 Query: 343 aggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctcc 402 ||| | | || ||||||||||| || || | ||||||| |||||| ||||||| ||| Sbjct: 651 agggtaagttcttcattgactgctagagcaatatgttttgtgctcagtactgtctcttcc 592 Query: 403 agcttctcaaggccctcatcttgttctttcatgatttgcctctgaaggccaacaatccct 462 ||||||||||| |||||||||||||||||||| | |||||||||||| ||| || ||| Sbjct: 591 agcttctcaagaccctcatcttgttctttcataacttgcctctgaagtgaaacgattcct 532 Query: 463 tggttatccaacccagccactctgctcatgtcatcagcagctttcttactct 514 ||||||||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 531 tggttatccaaaccagctactctactcatatcatcagctgctttcttactct 480
>dbj|AK102774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107H09, full insert sequence Length = 1130 Score = 222 bits (112), Expect = 9e-55 Identities = 337/412 (81%) Strand = Plus / Minus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 891 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 832 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 831 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 772 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 771 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 712 Query: 283 tggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatcagtcttgcatgt 342 || || || ||||||||| |||| |||| || || | |||||||||| ||||| ||| Sbjct: 711 tgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaatcaatcttgtatgc 652 Query: 343 aggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctcc 402 ||| | | || ||||||||||| || || | ||||||| |||||| ||||||| ||| Sbjct: 651 agggtaagttcttcattgactgctagagcaatatgttttgtgctcagtactgtctcttcc 592 Query: 403 agcttctcaaggccctcatcttgttctttcatgatttgcctctgaaggccaacaatccct 462 ||||||||||| |||||||||||||||||||| | |||||||||||| ||| || ||| Sbjct: 591 agcttctcaagaccctcatcttgttctttcataacttgcctctgaagtgaaacgattcct 532 Query: 463 tggttatccaacccagccactctgctcatgtcatcagcagctttcttactct 514 ||||||||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 531 tggttatccaaaccagctactctactcatatcatcagctgctttcttactct 480
>dbj|AK060055.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D08, full insert sequence Length = 1049 Score = 222 bits (112), Expect = 9e-55 Identities = 337/412 (81%) Strand = Plus / Minus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 901 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 842 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 841 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 782 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 781 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 722 Query: 283 tggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatcagtcttgcatgt 342 || || || ||||||||| |||| |||| || || | |||||||||| ||||| ||| Sbjct: 721 tgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaatcaatcttgtatgc 662 Query: 343 aggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctcc 402 ||| | | || ||||||||||| || || | ||||||| |||||| ||||||| ||| Sbjct: 661 agggtaagttcttcattgactgctagagcaatatgttttgtgctcagtactgtctcttcc 602 Query: 403 agcttctcaaggccctcatcttgttctttcatgatttgcctctgaaggccaacaatccct 462 ||||||||||| |||||||||||||||||||| | |||||||||||| ||| || ||| Sbjct: 601 agcttctcaagaccctcatcttgttctttcataacttgcctctgaagtgaaacgattcct 542 Query: 463 tggttatccaacccagccactctgctcatgtcatcagcagctttcttactct 514 ||||||||||| ||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 541 tggttatccaaaccagctactctactcatatcatcagctgctttcttactct 490
>gb|AY110255.1| Zea mays CL3925_1 mRNA sequence Length = 993 Score = 190 bits (96), Expect = 3e-45 Identities = 237/284 (83%) Strand = Plus / Minus Query: 214 agcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttt 273 |||||| || |||| ||||| || || |||| |||||||||||| | |||||||||||| Sbjct: 662 agcaggcacgtgcatgagcaaccacctttggtgcgcttgttcagaattgcaagcctcttt 603 Query: 274 tgcacacgctggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatcagt 333 ||||||||||| || || || |||||| |||| ||||| || || |||||||| |||| | Sbjct: 602 tgcacacgctgaagacgtgaatttgtaacatcaacatgatcttcaaggtcatctatcaat 543 Query: 334 cttgcatgtaggtcaggctcctcattgactgccagcgcgacgtgttttgcgctcagcact 393 |||| || ||| | | || ||||||||||| | || | || || | |||||||||| Sbjct: 542 cttgtgtgcagggtaagttcttcattgactgctaatgcaatatgcttcgtgctcagcact 483 Query: 394 gtctgctccagcttctcaaggccctcatcttgttctttcatgatttgcctctgaaggcca 453 |||| ||||||||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 482 gtctcttccagcttctcgagaccctcatcttgctctttcataatttgcctctgaaggcca 423 Query: 454 acaatcccttggttatccaacccagccactctgctcatgtcatc 497 ||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 422 acaattccttggttatctaacccagcaactctgctcatgtcatc 379
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 428 ctttcatgatttgcctctgaaggccaacaatcccttggttatccaacccagccactctgc 487 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 10756133 ctttcataatttgcctctgaaggccaacaatcccttggttatccaaaccagcaactctgc 10756074 Query: 488 tcatgtcatcagcagctttctt 509 |||| |||||||| || ||||| Sbjct: 10756073 tcatatcatcagctgccttctt 10756052 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Minus Query: 150 ttacagatacttgatgaggagccagacaataaccacaagcatcactataccgacggtgga 209 ||||| ||||||||| || ||||| || ||||| |||| |||||||| ||||| || Sbjct: 10756855 ttacatatacttgataagaagccacacgataacagcaaggatcactattgcgacgacaga 10756796 Query: 210 cagcagcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcct 269 ||||||||| ||||||| |||||||| || |||| |||||||||||| | |||||||| Sbjct: 10756795 tagcagcaggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcct 10756736 Query: 270 cttttgcacacgctgga 286 ||||||||||||||||| Sbjct: 10756735 cttttgcacacgctgga 10756719 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 355 tcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctccagcttctcaagg 414 ||||||||||| | |||| ||||||| ||||| ||||||| |||||||||||||| Sbjct: 10756455 tcattgactgctaaagcgatatgttttgtactcaggactgtctcttccagcttctcaaga 10756396 Query: 415 ccctcatcttgttct 429 || |||||||||||| Sbjct: 10756395 ccttcatcttgttct 10756381
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 428 ctttcatgatttgcctctgaaggccaacaatcccttggttatccaacccagccactctgc 487 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 53265 ctttcataatttgcctctgaaggccaacaatcccttggttatccaaaccagcaactctgc 53206 Query: 488 tcatgtcatcagcagctttctt 509 |||| |||||||| || ||||| Sbjct: 53205 tcatatcatcagctgccttctt 53184 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Minus Query: 150 ttacagatacttgatgaggagccagacaataaccacaagcatcactataccgacggtgga 209 ||||| ||||||||| || ||||| || ||||| |||| |||||||| ||||| || Sbjct: 53987 ttacatatacttgataagaagccacacgataacagcaaggatcactattgcgacgacaga 53928 Query: 210 cagcagcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcct 269 ||||||||| ||||||| |||||||| || |||| |||||||||||| | |||||||| Sbjct: 53927 tagcagcaggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcct 53868 Query: 270 cttttgcacacgctgga 286 ||||||||||||||||| Sbjct: 53867 cttttgcacacgctgga 53851 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 355 tcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctccagcttctcaagg 414 ||||||||||| | |||| ||||||| ||||| ||||||| |||||||||||||| Sbjct: 53587 tcattgactgctaaagcgatatgttttgtactcaggactgtctcttccagcttctcaaga 53528 Query: 415 ccctcatcttgttct 429 || |||||||||||| Sbjct: 53527 ccttcatcttgttct 53513
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 1022340 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 1022399 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 1022400 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 1022459 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 1022460 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 1022519 Query: 283 tg 284 || Sbjct: 1022520 tg 1022521 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 428 ctttcatgatttgcctctgaaggccaacaatcccttggttatccaacccagccactctgc 487 ||||||| | |||||||||||| ||| || |||||||||||||| ||||| ||||| | Sbjct: 1023102 ctttcataacttgcctctgaagtgaaacgattccttggttatccaaaccagctactctac 1023161 Query: 488 tcatgtcatcagcagctttcttactct 514 |||| |||||||| ||||||||||||| Sbjct: 1023162 tcatatcatcagctgctttcttactct 1023188 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 355 tcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctccagcttctcaagg 414 ||||||||||| || || | ||||||| |||||| ||||||| |||||||||||||| Sbjct: 1022778 tcattgactgctagagcaatatgttttgtgctcagtactgtctcttccagcttctcaaga 1022837 Query: 415 ccctcatcttgttct 429 ||||||||||||||| Sbjct: 1022838 ccctcatcttgttct 1022852
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 11048 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 11107 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 11108 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 11167 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 11168 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 11227 Query: 283 tg 284 || Sbjct: 11228 tg 11229 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 428 ctttcatgatttgcctctgaaggccaacaatcccttggttatccaacccagccactctgc 487 ||||||| | |||||||||||| ||| || |||||||||||||| ||||| ||||| | Sbjct: 11810 ctttcataacttgcctctgaagtgaaacgattccttggttatccaaaccagctactctac 11869 Query: 488 tcatgtcatcagcagctttcttactct 514 |||| |||||||| ||||||||||||| Sbjct: 11870 tcatatcatcagctgctttcttactct 11896 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 355 tcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctccagcttctcaagg 414 ||||||||||| || || | ||||||| |||||| ||||||| |||||||||||||| Sbjct: 11486 tcattgactgctagagcaatatgttttgtgctcagtactgtctcttccagcttctcaaga 11545 Query: 415 ccctcatcttgttct 429 ||||||||||||||| Sbjct: 11546 ccctcatcttgttct 11560
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttacagatacttg 162 ||||||||||||||||||| |||||| |||||||| | || ||||||||| | |||| Sbjct: 93759 atctttgaaagactgcacatttcaaactgatttgagttagacacaggttacaggtgcttg 93818 Query: 163 atgaggagccagacaataaccacaagcatcactataccgacggtggacagcagcagggac 222 ||||| ||||| |||| ||| |||| | ||||||| | ||| || | |||||||| | Sbjct: 93819 atgagaagccaagcaatgaccgcaagaaacactatagcaacgacagatatcagcagggcc 93878 Query: 223 atgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctcttttgcacacgc 282 ||||| |||||||| || ||| ||||||| ||||| | ||||||||||||||||| ||| Sbjct: 93879 atgcacgagcagccacctttgacgcgcttattcagaatagcaagcctcttttgcacgcgc 93938 Query: 283 tg 284 || Sbjct: 93939 tg 93940 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 428 ctttcatgatttgcctctgaaggccaacaatcccttggttatccaacccagccactctgc 487 ||||||| | |||||||||||| ||| || |||||||||||||| ||||| ||||| | Sbjct: 94521 ctttcataacttgcctctgaagtgaaacgattccttggttatccaaaccagctactctac 94580 Query: 488 tcatgtcatcagcagctttcttactct 514 |||| |||||||| ||||||||||||| Sbjct: 94581 tcatatcatcagctgctttcttactct 94607 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 355 tcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctccagcttctcaagg 414 ||||||||||| || || | ||||||| |||||| ||||||| |||||||||||||| Sbjct: 94197 tcattgactgctagagcaatatgttttgtgctcagtactgtctcttccagcttctcaaga 94256 Query: 415 ccctcatcttgttct 429 ||||||||||||||| Sbjct: 94257 ccctcatcttgttct 94271
>gb|BT014149.1| Lycopersicon esculentum clone 133268F, mRNA sequence Length = 1070 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Minus Query: 292 gagtttgtaccatccacatggtcgtctaggtcatcaatcagtcttgcatgtaggtcaggc 351 |||| |||| |||| ||||| ||||| ||||||||||| ||||||| || | | || | Sbjct: 721 gagtctgtaacatcaacatgttcgtccaggtcatcaataagtcttgtttgcaagccaagt 662 Query: 352 tcctcattgactgccagcgcgacgtgttttgcgctcagcactgtctgctccagcttctca 411 || ||||| |||||||| || | ||||| | ||||| |||||||| |||||| ||||| Sbjct: 661 tcttcattaactgccagtgctatatgtttagtgctcatcactgtctcctccagactctca 602 Query: 412 aggccctcatcttgttctttcatgatttgcc 442 |||||||||||||| |||||||| ||||||| Sbjct: 601 aggccctcatcttgctctttcataatttgcc 571
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 376 tgttttgcgctcagcactgtctgctccagcttctcaaggccctcatcttgttctttcatg 435 ||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||| | Sbjct: 2394169 tgttttgtgctcagtactgtctcttccagcttctcaagaccctcatcttgttctttcgta 2394110 Query: 436 atttgcctctgaag 449 | ||| |||||||| Sbjct: 2394109 acttgactctgaag 2394096 Score = 58.0 bits (29), Expect = 3e-05 Identities = 105/129 (81%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 211 agcagcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctc 270 |||||||||| |||||| |||||||| || ||| ||||||| ||||| | ||||||||| Sbjct: 2394300 agcagcagggccatgcatgagcagccacctttgacgcgcttattcagaatggcaagcctc 2394241 Query: 271 ttttgcacacgctggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatc 330 ||||||| ||||| || || ||||| ||| |||| || || || |||| || |||||| Sbjct: 2394240 -tttgcacgcgctgaagacgtgagttcgtaacatcaacgtgatcatctaaatcgtcaatc 2394182 Query: 331 agtcttgca 339 | ||||||| Sbjct: 2394181 aatcttgca 2394173 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttaca 154 ||||||||||||||||||| |||||| |||||||||| ||||||||||| Sbjct: 2394445 atctttgaaagactgcacatttcaaactgatttgagttggacagaggttaca 2394394
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 376 tgttttgcgctcagcactgtctgctccagcttctcaaggccctcatcttgttctttcatg 435 ||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||| | Sbjct: 97177 tgttttgtgctcagtactgtctcttccagcttctcaagaccctcatcttgttctttcgta 97118 Query: 436 atttgcctctgaag 449 | ||| |||||||| Sbjct: 97117 acttgactctgaag 97104 Score = 58.0 bits (29), Expect = 3e-05 Identities = 105/129 (81%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 211 agcagcagggacatgcaggagcagccgcccttggcgcgcttgttcaggaccgcaagcctc 270 |||||||||| |||||| |||||||| || ||| ||||||| ||||| | ||||||||| Sbjct: 97308 agcagcagggccatgcatgagcagccacctttgacgcgcttattcagaatggcaagcctc 97249 Query: 271 ttttgcacacgctggaggcgcgagtttgtaccatccacatggtcgtctaggtcatcaatc 330 ||||||| ||||| || || ||||| ||| |||| || || || |||| || |||||| Sbjct: 97248 -tttgcacgcgctgaagacgtgagttcgtaacatcaacgtgatcatctaaatcgtcaatc 97190 Query: 331 agtcttgca 339 | ||||||| Sbjct: 97189 aatcttgca 97181 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 103 atctttgaaagactgcacagacgaaactgctttgagttgggcagaggttaca 154 ||||||||||||||||||| |||||| |||||||||| ||||||||||| Sbjct: 97453 atctttgaaagactgcacatttcaaactgatttgagttggacagaggttaca 97402
>ref|NM_186306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 376 tgttttgcgctcagcactgtctgctccagcttctcaaggccctcatcttgttctttc 432 ||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||| Sbjct: 980 tgttttgtgctcagtactgtctcttccagcttctcaagaccctcatcttgttctttc 924
>emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 on chromosome 3, complete sequence Length = 107004 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 406 ttctcaaggccctcatcttgttct 429 |||||||||||||||||||||||| Sbjct: 11912 ttctcaaggccctcatcttgttct 11935
>ref|NM_101490.2| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS 51) AT1G16240 (SYP51) transcript variant AT1G16240.1 mRNA, complete cds Length = 1077 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 611 ccaacaattccttggttatccatgccagtaactctgctcatg 570
>ref|NM_001035977.1| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS 51) AT1G16240 (SYP51) transcript variant AT1G16240.2 mRNA, complete cds Length = 1065 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 588 ccaacaattccttggttatccatgccagtaactctgctcatg 547
>ref|NM_101489.2| Arabidopsis thaliana unknown protein AT1G16230 mRNA, complete cds Length = 582 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| |||||||||||||| ||| |||||||||||| Sbjct: 392 ccaacaattccttggttatccaagccaataactctgctcatg 351
>gb|AY097382.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, complete cds Length = 699 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 398 ccaacaattccttggttatccatgccagtaactctgctcatg 357
>gb|AY074863.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, complete cds Length = 975 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 564 ccaacaattccttggttatccatgccagtaactctgctcatg 523
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 187 agcatcactataccgacggtggacagcagc 216 |||||||| |||||||||||| |||||||| Sbjct: 687832 agcatcacgataccgacggtgaacagcagc 687803
>gb|AF355755.1|AF355755 Arabidopsis thaliana syntaxin of plants 51 (SYP51) mRNA, complete cds Length = 941 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 524 ccaacaattccttggttatccatgccagtaactctgctcatg 483
>emb|BX818553.1|CNS0AEBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZB12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 502 ccaacaattccttggttatccatgccagtaactctgctcatg 461
>emb|BX816781.1|CNS0ADA0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1031 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 570 ccaacaattccttggttatccatgccagtaactctgctcatg 529
>emb|BX818248.1|CNS0ACLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 954 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 530 ccaacaattccttggttatccatgccagtaactctgctcatg 489
>gb|AY085320.1| Arabidopsis thaliana clone 145295 mRNA, complete sequence Length = 948 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 538 ccaacaattccttggttatccatgccagtaactctgctcatg 497
>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence Length = 114498 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Plus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| ||||||||||||| |||| |||||||||||| Sbjct: 10857 ccaacaattccttggttatccatgccagtaactctgctcatg 10898 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Plus Query: 451 ccaacaatcccttggttatccaacccagccactctgctcatg 492 |||||||| |||||||||||||| ||| |||||||||||| Sbjct: 8844 ccaacaattccttggttatccaagccaataactctgctcatg 8885
>gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, complete sequence Length = 192819 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 accataatatctttgaaagac 115 ||||||||||||||||||||| Sbjct: 127445 accataatatctttgaaagac 127425
>gb|AC005486.2| Homo sapiens PAC clone RP5-1070G24 from 7, complete sequence Length = 157075 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 ctccagcttctcaaggccctcatct 423 ||||||||||||| ||||||||||| Sbjct: 1541 ctccagcttctcagggccctcatct 1565
>gb|AC146169.2| Pan troglodytes BAC clone RP43-1A11 from 7, complete sequence Length = 190018 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 ctccagcttctcaaggccctcatct 423 ||||||||||||| ||||||||||| Sbjct: 97517 ctccagcttctcagggccctcatct 97541
>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the SOX21 gene for SRY (sex determining region Y)-box 21, a bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and 2 CpG islands, complete sequence Length = 180538 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 ttctttcatgatttgcctctg 446 ||||||||||||||||||||| Sbjct: 169747 ttctttcatgatttgcctctg 169727
>gb|AE014176.1| Mus musculus piebald deletion region section 4 of 11 of the complete sequence Length = 395229 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 accataatatctttgaaagac 115 ||||||||||||||||||||| Sbjct: 24913 accataatatctttgaaagac 24893
>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence Length = 145512 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 agcagggacatgcaggagcag 234 ||||||||||||||||||||| Sbjct: 75656 agcagggacatgcaggagcag 75636
>gb|BC039683.1| Homo sapiens, clone IMAGE:5225774, mRNA Length = 916 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 agcagggacatgcaggagcag 234 ||||||||||||||||||||| Sbjct: 46 agcagggacatgcaggagcag 26
>gb|AC163102.5| Mus musculus chromosome 18, clone RP23-270E10, complete sequence Length = 179127 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 accataatatctttgaaaga 114 |||||||||||||||||||| Sbjct: 145201 accataatatctttgaaaga 145182
>ref|NM_189140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 747 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 149 tcatcttgttctttcatgat 130
>ref|NM_189141.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 1277 tcatcttgttctttcatgat 1258
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gaaagactgcacagacgaaa 128 |||||||||||||||||||| Sbjct: 130455 gaaagactgcacagacgaaa 130474
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctcctcattgactgccagcgcgac 374 |||||| ||||||||||||||||| Sbjct: 76782 ctcctcgttgactgccagcgcgac 76805
>gb|AC145084.6| Mus musculus chromosome 18, clone RP24-175N20, complete sequence Length = 193640 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 accataatatctttgaaaga 114 |||||||||||||||||||| Sbjct: 83826 accataatatctttgaaaga 83807
>ref|XM_715701.1| Candida albicans SC5314 putative peroxisomal biogenesis AAA ATPase Pex1 (CaO19_13818), mRNA Length = 3276 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtggcatacatattttccatttct 67 ||||||| |||||||||||||||| Sbjct: 1733 gtggcatccatattttccatttct 1710
>gb|U19026.1|HSU19026 Human TR2 orphan receptor gene, 5' untranslated region Length = 2774 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 taaccacaagcatcactata 198 |||||||||||||||||||| Sbjct: 205 taaccacaagcatcactata 224
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 gccgcccttggcgcgcttgttcag 257 ||||||||||||||||||| |||| Sbjct: 2195136 gccgcccttggcgcgcttggtcag 2195113
>ref|XM_803920.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053510205.70) partial mRNA Length = 960 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ggtggacagcagcagggaca 223 |||||||||||||||||||| Sbjct: 100 ggtggacagcagcagggaca 81
>ref|XM_883773.1| Candida albicans SC5314 hypothetical protein (CaJ7.0291) partial mRNA Length = 3276 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtggcatacatattttccatttct 67 ||||||| |||||||||||||||| Sbjct: 1733 gtggcatccatattttccatttct 1710
>ref|XM_716210.1| Candida albicans SC5314 peroxisomal biogenesis AAA ATPase Pex1 (PEX1) partial mRNA Length = 3276 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtggcatacatattttccatttct 67 ||||||| |||||||||||||||| Sbjct: 1733 gtggcatccatattttccatttct 1710
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ctgctccagcttctcaaggccctc 419 ||||||||||||||| |||||||| Sbjct: 704862 ctgctccagcttctccaggccctc 704839
>gb|AC011598.33| Homo sapiens 12 BAC RP11-778N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171787 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 taaccacaagcatcactata 198 |||||||||||||||||||| Sbjct: 23991 taaccacaagcatcactata 24010
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctcctcattgactgccagcgcgac 374 |||||| ||||||||||||||||| Sbjct: 76801 ctcctcgttgactgccagcgcgac 76824
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctcctcattgactgccagcgcgac 374 |||||| ||||||||||||||||| Sbjct: 76828 ctcctcgttgactgccagcgcgac 76851
>emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete genome; segment 7/10 Length = 348950 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 ctcctcattgactgccagcgcgac 374 |||||| ||||||||||||||||| Sbjct: 131265 ctcctcgttgactgccagcgcgac 131288
>gb|U13692.1|OCALREDS5 Oryctolagus cuniculus aldose reductase gene, exon 4-8 Length = 3000 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 cagcagggacatgcaggagcagccgccc 240 |||| |||||||| |||||||||||||| Sbjct: 999 cagcggggacatgaaggagcagccgccc 972
>gb|AY458592.1| Bufo melanostictus mitochondrion, complete genome Length = 17374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 atgcaggagcagccgccctt 242 |||||||||||||||||||| Sbjct: 12389 atgcaggagcagccgccctt 12408
>dbj|AB226466.1| Aspergillus oryzae cDNA, contig sequence: AoEST3328 Length = 432 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 cttggttatccaacccagcc 480 |||||||||||||||||||| Sbjct: 405 cttggttatccaacccagcc 386
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 cttggttatccaacccagcc 480 |||||||||||||||||||| Sbjct: 36573 cttggttatccaacccagcc 36554
>gb|AF204275.2| Desulfitobacterium chlororespirans clone 1256 putative membrane docking protein, o-chlorophenol reductive dehalogenase (cprA), putative membrane docking protein, and putative o-chlorophenol reductive dehalogenase genes, complete cds; and unknown gene Length = 5353 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tctcgccaaaacgacggcga 84 |||||||||||||||||||| Sbjct: 2772 tctcgccaaaacgacggcga 2753
>gb|AC093783.2| Homo sapiens BAC clone RP11-209D20 from 4, complete sequence Length = 121709 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 catacatattttccatttct 67 |||||||||||||||||||| Sbjct: 95256 catacatattttccatttct 95275
>gb|AC161421.3| Mus musculus BAC clone RP24-424A8 from chromosome 9, complete sequence Length = 167449 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gctcatgtcatcagcagctt 505 |||||||||||||||||||| Sbjct: 11147 gctcatgtcatcagcagctt 11128
>emb|CR390685.1| Gallus gallus finished cDNA, clone ChEST619i22 Length = 1481 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 catacatattttccatttct 67 |||||||||||||||||||| Sbjct: 1304 catacatattttccatttct 1323
>dbj|AK044542.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930021D14 product:unclassifiable, full insert sequence Length = 1864 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 accataatatctttgaaaga 114 |||||||||||||||||||| Sbjct: 1705 accataatatctttgaaaga 1724
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 17082436 tcatcttgttctttcatgat 17082417 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 17071151 tcatcttgttctttcatgat 17071132
>gb|AC007883.3| Homo sapiens BAC clone RP11-508L23 from 2, complete sequence Length = 113189 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ctcttttgcacacgctggag 287 |||||||||||||||||||| Sbjct: 109421 ctcttttgcacacgctggag 109440
>gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome 9, complete sequence Length = 178684 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gctcatgtcatcagcagctt 505 |||||||||||||||||||| Sbjct: 72175 gctcatgtcatcagcagctt 72194
>dbj|AP004723.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1126_G08 Length = 157455 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 79385 tcatcttgttctttcatgat 79366 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 68100 tcatcttgttctttcatgat 68081
>gb|AY827987.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_solo_LTR_CH1-9 noaCRR1 retrotransposon, partial sequence Length = 731 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 60 tcatcttgttctttcatgat 41
>gb|AY827972.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH1-11 noaCRR1 retrotransposon, partial sequence Length = 4323 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 3666 tcatcttgttctttcatgat 3647
>ref|XM_553377.1| Anopheles gambiae str. PEST ENSANGP00000028381 (ENSANGG00000021982), partial mRNA Length = 297 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgcccttggcgcgcttgttc 255 |||||||||||||||||||| Sbjct: 289 cgcccttggcgcgcttgttc 270
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtggcatacatattttccatttct 67 ||||||| |||||||||||||||| Sbjct: 536704 gtggcatccatattttccatttct 536681
>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete sequence Length = 225002 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gaacttcacatttcaaccca 30 |||||||||||||||||||| Sbjct: 117382 gaacttcacatttcaaccca 117401
>emb|AL713861.10| Mouse DNA sequence from clone RP23-367H15 on chromosome X, complete sequence Length = 169838 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 tcatcttgttctttcatgat 437 |||||||||||||||||||| Sbjct: 25749 tcatcttgttctttcatgat 25768 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,513,408 Number of Sequences: 3902068 Number of extensions: 4513408 Number of successful extensions: 97427 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97059 Number of HSP's gapped (non-prelim): 352 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)