>ref|XM_475176.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1011

 Score =  133 bits (67), Expect = 5e-28
 Identities = 133/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 242  gccgacgatgagcgagacgagcgcgtccttgaagtggccgtgcgcgctgccggcgacggc 301
            |||| ||| |||||||| |||||||||  || ||| |||||||||  | |||||||||||
Sbjct: 1002 gccggcgacgagcgagaggagcgcgtctctgtagtagccgtgcgccttcccggcgacggc 943

                                                                        
Query: 302  gtcctcgagcttggccccgaactgctcctggtaggccgccctgatgccgtccatgtccac 361
            |||||| ||| |  | ||||||||||| ||||||||||| | |||| |||||||||||||
Sbjct: 942  gtcctccagcctcccgccgaactgctcgtggtaggccgcgcggatggcgtccatgtccac 883

                                               
Query: 362  gtccgaccgcgtcaccgccacccgcgacagggcct 396
            ||||| |||||||||||||||||||| ||| ||||
Sbjct: 882  gtccgcccgcgtcaccgccacccgcgtcagcgcct 848

>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score =  133 bits (67), Expect = 5e-28
 Identities = 133/155 (85%)
 Strand = Plus / Plus

                                                                          
Query: 242    gccgacgatgagcgagacgagcgcgtccttgaagtggccgtgcgcgctgccggcgacggc 301
              |||| ||| |||||||| |||||||||  || ||| |||||||||  | |||||||||||
Sbjct: 143519 gccggcgacgagcgagaggagcgcgtctctgtagtagccgtgcgccttcccggcgacggc 143578

                                                                          
Query: 302    gtcctcgagcttggccccgaactgctcctggtaggccgccctgatgccgtccatgtccac 361
              |||||| ||| |  | ||||||||||| ||||||||||| | |||| |||||||||||||
Sbjct: 143579 gtcctccagcctcccgccgaactgctcgtggtaggccgcgcggatggcgtccatgtccac 143638

                                                 
Query: 362    gtccgaccgcgtcaccgccacccgcgacagggcct 396
              ||||| |||||||||||||||||||| ||| ||||
Sbjct: 143639 gtccgcccgcgtcaccgccacccgcgtcagcgcct 143673

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  133 bits (67), Expect = 5e-28
 Identities = 133/155 (85%)
 Strand = Plus / Plus

                                                                            
Query: 242      gccgacgatgagcgagacgagcgcgtccttgaagtggccgtgcgcgctgccggcgacggc 301
                |||| ||| |||||||| |||||||||  || ||| |||||||||  | |||||||||||
Sbjct: 18350307 gccggcgacgagcgagaggagcgcgtctctgtagtagccgtgcgccttcccggcgacggc 18350366

                                                                            
Query: 302      gtcctcgagcttggccccgaactgctcctggtaggccgccctgatgccgtccatgtccac 361
                |||||| ||| |  | ||||||||||| ||||||||||| | |||| |||||||||||||
Sbjct: 18350367 gtcctccagcctcccgccgaactgctcgtggtaggccgcgcggatggcgtccatgtccac 18350426

                                                   
Query: 362      gtccgaccgcgtcaccgccacccgcgacagggcct 396
                ||||| |||||||||||||||||||| ||| ||||
Sbjct: 18350427 gtccgcccgcgtcaccgccacccgcgtcagcgcct 18350461



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 199      gagaagacgaagacgaaccc 218
                ||||||||||||||||||||
Sbjct: 26915273 gagaagacgaagacgaaccc 26915254

>dbj|AK104639.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E05, full
            insert sequence
          Length = 1254

 Score =  133 bits (67), Expect = 5e-28
 Identities = 133/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 242  gccgacgatgagcgagacgagcgcgtccttgaagtggccgtgcgcgctgccggcgacggc 301
            |||| ||| |||||||| |||||||||  || ||| |||||||||  | |||||||||||
Sbjct: 1058 gccggcgacgagcgagaggagcgcgtctctgtagtagccgtgcgccttcccggcgacggc 999

                                                                        
Query: 302  gtcctcgagcttggccccgaactgctcctggtaggccgccctgatgccgtccatgtccac 361
            |||||| ||| |  | ||||||||||| ||||||||||| | |||| |||||||||||||
Sbjct: 998  gtcctccagcctcccgccgaactgctcgtggtaggccgcgcggatggcgtccatgtccac 939

                                               
Query: 362  gtccgaccgcgtcaccgccacccgcgacagggcct 396
            ||||| |||||||||||||||||||| ||| ||||
Sbjct: 938  gtccgcccgcgtcaccgccacccgcgtcagcgcct 904

>dbj|AK098879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F11, full
            insert sequence
          Length = 1254

 Score =  133 bits (67), Expect = 5e-28
 Identities = 133/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 242  gccgacgatgagcgagacgagcgcgtccttgaagtggccgtgcgcgctgccggcgacggc 301
            |||| ||| |||||||| |||||||||  || ||| |||||||||  | |||||||||||
Sbjct: 1059 gccggcgacgagcgagaggagcgcgtctctgtagtagccgtgcgccttcccggcgacggc 1000

                                                                        
Query: 302  gtcctcgagcttggccccgaactgctcctggtaggccgccctgatgccgtccatgtccac 361
            |||||| ||| |  | ||||||||||| ||||||||||| | |||| |||||||||||||
Sbjct: 999  gtcctccagcctcccgccgaactgctcgtggtaggccgcgcggatggcgtccatgtccac 940

                                               
Query: 362  gtccgaccgcgtcaccgccacccgcgacagggcct 396
            ||||| |||||||||||||||||||| ||| ||||
Sbjct: 939  gtccgcccgcgtcaccgccacccgcgtcagcgcct 905

>dbj|AK060054.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B07, full
            insert sequence
          Length = 1284

 Score =  133 bits (67), Expect = 5e-28
 Identities = 133/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 242  gccgacgatgagcgagacgagcgcgtccttgaagtggccgtgcgcgctgccggcgacggc 301
            |||| ||| |||||||| |||||||||  || ||| |||||||||  | |||||||||||
Sbjct: 1058 gccggcgacgagcgagaggagcgcgtctctgtagtagccgtgcgccttcccggcgacggc 999

                                                                        
Query: 302  gtcctcgagcttggccccgaactgctcctggtaggccgccctgatgccgtccatgtccac 361
            |||||| ||| |  | ||||||||||| ||||||||||| | |||| |||||||||||||
Sbjct: 998  gtcctccagcctcccgccgaactgctcgtggtaggccgcgcggatggcgtccatgtccac 939

                                               
Query: 362  gtccgaccgcgtcaccgccacccgcgacagggcct 396
            ||||| |||||||||||||||||||| ||| ||||
Sbjct: 938  gtccgcccgcgtcaccgccacccgcgtcagcgcct 904

>gb|AY107653.1| Zea mays PCO119349 mRNA sequence
          Length = 587

 Score =  111 bits (56), Expect = 2e-21
 Identities = 116/136 (85%)
 Strand = Plus / Plus

                                                                       
Query: 261 agcgcgtccttgaagtggccgtgcgcgctgccggcgacggcgtcctcgagcttggccccg 320
           ||||||||| || |||| ||||||||  || | |||| | ||||||| ||||||||||||
Sbjct: 267 agcgcgtccctgtagtgtccgtgcgccttggccgcgatgacgtcctccagcttggccccg 326

                                                                       
Query: 321 aactgctcctggtaggccgccctgatgccgtccatgtccacgtccgaccgcgtcaccgcc 380
           |||||||  |||||||| || |||||| ||||||||||   |||||||||||||||||||
Sbjct: 327 aactgctggtggtaggcggctctgatgtcgtccatgtcgtggtccgaccgcgtcaccgcc 386

                           
Query: 381 acccgcgacagggcct 396
           |||| || ||||||||
Sbjct: 387 accctcgtcagggcct 402

>dbj|AB190187.1| Arthrobacter globiformis cmmA, cmmB genes for
            6-alpha-maltosyltransferase, hypothetical protein,
            complete and partial cds
          Length = 4467

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 264  gcgtccttgaagtggccgtgcgcg 287
            ||||||||||||||||||||||||
Sbjct: 3512 gcgtccttgaagtggccgtgcgcg 3489

>emb|AL606470.15| Mouse DNA sequence from clone RP23-293J11 on chromosome 11 Contains a
              Friedreich ataxia protein (Frda) pseudogene, complete
              sequence
          Length = 203970

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 62     cctcagctgcaaatgttacatt 83
              ||||||||||||||||||||||
Sbjct: 122286 cctcagctgcaaatgttacatt 122307

>gb|AC129807.4| Homo sapiens 3 BAC RP11-359D24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 67091

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 13    tccaaatggttaattttatttg 34
             ||||||||||||||||||||||
Sbjct: 56822 tccaaatggttaattttatttg 56801

>gb|AC130255.5| Homo sapiens 3 BAC RP11-473M6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 67201

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 13    tccaaatggttaattttatttg 34
             ||||||||||||||||||||||
Sbjct: 10389 tccaaatggttaattttatttg 10410

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 364    ccgaccgcgtcaccgccacccgcgac 389
              |||||||||||||| |||||||||||
Sbjct: 651605 ccgaccgcgtcacccccacccgcgac 651580

>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 364    ccgaccgcgtcaccgccaccc 384
              |||||||||||||||||||||
Sbjct: 126036 ccgaccgcgtcaccgccaccc 126016

>dbj|AK076574.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4921518K07 product:unclassifiable, full
            insert sequence
          Length = 4711

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 138  atgaagcaggaaaaaagaaaa 158
            |||||||||||||||||||||
Sbjct: 4656 atgaagcaggaaaaaagaaaa 4676

>gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195726

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    atgaagcaggaaaaaagaaaa 158
              |||||||||||||||||||||
Sbjct: 157931 atgaagcaggaaaaaagaaaa 157911

>ref|XM_475829.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 gagaagacgaagacgaaccc 218
           ||||||||||||||||||||
Sbjct: 25  gagaagacgaagacgaaccc 6

>gb|AC102143.10| Mus musculus chromosome 7, clone RP23-292M1, complete sequence
          Length = 169980

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 134    ctagatgaagcaggaaaaaagaaa 157
              ||||||||||||| ||||||||||
Sbjct: 139438 ctagatgaagcagaaaaaaagaaa 139415

>gb|AC123071.3| Mus musculus BAC clone RP23-70P8 from chromosome 13, complete sequence
          Length = 252384

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   aagcaggaaaaaagaaaaca 160
             ||||||||||||||||||||
Sbjct: 96445 aagcaggaaaaaagaaaaca 96426

>ref|XM_322490.1| Neurospora crassa OR74A hypothetical protein (NCU00405.1) partial
           mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 cgacggcgtcctcgagcttg 314
           ||||||||||||||||||||
Sbjct: 472 cgacggcgtcctcgagcttg 453

>ref|XM_952198.1| Neurospora crassa OR74A hypothetical protein (NCU00405.1) partial
           mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 cgacggcgtcctcgagcttg 314
           ||||||||||||||||||||
Sbjct: 472 cgacggcgtcctcgagcttg 453

>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12,
             complete sequence
          Length = 119909

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   gagaagacgaagacgaaccc 218
             ||||||||||||||||||||
Sbjct: 67705 gagaagacgaagacgaaccc 67686

>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence
          Length = 228750

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   agcaggaaaaaagaaaacac 161
             ||||||||||||||||||||
Sbjct: 89700 agcaggaaaaaagaaaacac 89681

>gb|AF545435.1| Homo sapiens thymine-DNA glycosylase (TDG) gene, complete cds
          Length = 25621

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   aagcaggaaaaaagaaaaca 160
             ||||||||||||||||||||
Sbjct: 20788 aagcaggaaaaaagaaaaca 20807

>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the
              Actr2 gene for ARP2 actin-related protein 2 homolog
              (yeast), a small nuclear ribonucleoprotein polypeptide G
              (Snrpg) pseudogene, two novel genes, the Rab1 gene for
              RAB1, member RAS oncogene family and three CpG islands,
              complete sequence
          Length = 203071

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    aagcaggaaaaaagaaaaca 160
              ||||||||||||||||||||
Sbjct: 196883 aagcaggaaaaaagaaaaca 196902

>gb|AY394844.4| Pseudomonas sp. M18 pyoluteorin biosynthetic and ABC transporter gene
             cluster, partial sequence
          Length = 32800

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 301   cgtcctcgagcttggccccgaactgctc 328
             |||||||||||||||||| || ||||||
Sbjct: 16538 cgtcctcgagcttggcccggacctgctc 16511

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 196      gacgagaagacgaagacgaa 215
                ||||||||||||||||||||
Sbjct: 22959886 gacgagaagacgaagacgaa 22959867

>gb|AC156635.2| Mus musculus BAC clone RP24-364K10 from chromosome 9, complete sequence
          Length = 187038

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tccaaatggttaattttatt 32
             ||||||||||||||||||||
Sbjct: 24690 tccaaatggttaattttatt 24709

>gb|AC114763.6| Homo sapiens BAC clone RP11-369K2 from 2, complete sequence
          Length = 87248

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   gatgaagcaggaaaaaagaaaaca 160
             ||||||||||||||||| ||||||
Sbjct: 21861 gatgaagcaggaaaaaacaaaaca 21838

>gb|AC078819.24| Homo sapiens 12q BAC RP11-490H24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172319

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   aagcaggaaaaaagaaaaca 160
             ||||||||||||||||||||
Sbjct: 61808 aagcaggaaaaaagaaaaca 61827

>ref|XM_343442.2| PREDICTED: Rattus norvegicus phosphoglucomutase 3 (predicted)
            (Pgm3_predicted), mRNA
          Length = 2711

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  aagcaggaaaaaagaaaaca 160
            ||||||||||||||||||||
Sbjct: 2467 aagcaggaaaaaagaaaaca 2486

>gb|AC127302.3| Mus musculus BAC clone RP23-269P7 from chromosome 9, complete sequence
          Length = 200073

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     tccaaatggttaattttatt 32
              ||||||||||||||||||||
Sbjct: 114651 tccaaatggttaattttatt 114670

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   gacgagaagacgaagacgaa 215
             ||||||||||||||||||||
Sbjct: 35100 gacgagaagacgaagacgaa 35081

>dbj|BS000219.2| Pan troglodytes chromosome 22 clone:RP43-010L20, map 22, complete
             sequences
          Length = 62227

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   aagcaggaaaaaagaaaaca 160
             ||||||||||||||||||||
Sbjct: 42524 aagcaggaaaaaagaaaaca 42543

>emb|Y10575.1|HSY10575 H.sapiens TDG gene, exon 6 & 7
          Length = 1169

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 aagcaggaaaaaagaaaaca 160
           ||||||||||||||||||||
Sbjct: 583 aagcaggaaaaaagaaaaca 602

>dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, section 44/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  aagcaggaaaaaagaaaaca 160
            ||||||||||||||||||||
Sbjct: 7985 aagcaggaaaaaagaaaaca 8004

>gb|AC151054.2| Mus musculus BAC clone RP23-147K16 from 13, complete sequence
          Length = 220038

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    aagcaggaaaaaagaaaaca 160
              ||||||||||||||||||||
Sbjct: 213737 aagcaggaaaaaagaaaaca 213756

>dbj|AP006675.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04L10, TM0370,
             complete sequence
          Length = 97544

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     caaagatccaaatggttaatttta 30
             ||||||||||||| ||||||||||
Sbjct: 42587 caaagatccaaatagttaatttta 42564

>dbj|AP001607.1| Homo sapiens genomic DNA, chromosome 21, clone:KB851D4, APP-D21S292
             region, complete sequence
          Length = 137676

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   aagcaggaaaaaagaaaaca 160
             ||||||||||||||||||||
Sbjct: 41305 aagcaggaaaaaagaaaaca 41324


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,053,135
Number of Sequences: 3902068
Number of extensions: 4053135
Number of successful extensions: 86429
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86169
Number of HSP's gapped (non-prelim): 260
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)