ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN655_HUMAN (Q8N720) Zinc finger protein 655 (Vav-interacting Kr... 30 2.4
2ZN287_HUMAN (Q9HBT7) Zinc finger protein 287 30 3.2
3ZFP62_MOUSE (Q8C827) Zinc finger protein 62 homolog (Zfp-62) (ZT3) 28 7.1
4CU090_HUMAN (P59090) Protein C21orf90 28 7.1
5FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.7... 28 9.2
6ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc fin... 28 9.2
7TR10B_HUMAN (O14763) Tumor necrosis factor receptor superfamily ... 28 9.2

>ZN655_HUMAN (Q8N720) Zinc finger protein 655 (Vav-interacting Kruppel-like|
           protein)
          Length = 491

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 31  QCDVVGVKSHKWSALVPHRSQHSREKKMK 117
           +CDV G   H+ SAL  H+  H+REK  K
Sbjct: 213 KCDVCGKIFHQSSALTRHQRIHTREKPYK 241



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>ZN287_HUMAN (Q9HBT7) Zinc finger protein 287|
          Length = 754

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 31  QCDVVGVKSHKWSALVPHRSQHSREK 108
           +C+V G K  K+ +L+ H+S H++EK
Sbjct: 362 KCNVCGKKFRKYPSLLKHQSTHAKEK 387



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>ZFP62_MOUSE (Q8C827) Zinc finger protein 62 homolog (Zfp-62) (ZT3)|
          Length = 914

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
 Frame = +1

Query: 31  QCDVVGVKSHKWSALVPHRSQHSREKKMK-----NLFHIDVQCEGRRKFVHGTNSCSCKV 195
           +CD  G     +S+L+ H+S HS EK  K       F+     +  ++   G     C  
Sbjct: 188 KCDECGKAYMSYSSLINHKSTHSGEKNCKCDECGKSFNYSSVLDQHKRIHTGEKPYECGE 247

Query: 196 TEKFARNNA--RAEKEPDESNRP 258
             K  RN++  R  K      +P
Sbjct: 248 CGKAFRNSSGLRVHKRIHTGEKP 270



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>CU090_HUMAN (P59090) Protein C21orf90|
          Length = 65

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 315 RQSTSKPPWSPAPCP 359
           R S  K PW PAPCP
Sbjct: 41  RDSALKTPWRPAPCP 55



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>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)|
          Length = 1679

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 276  SFHTSIGPGKHQCRQSTSKPPWSPAPCPCRSGCPSG 383
            S HT  GP ++QC Q  +   W  A   C   CP G
Sbjct: 1310 SCHTCSGPRRNQCVQCPA--GWQLAAGECHPECPEG 1343



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>ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc finger protein|
           SKAT-2)
          Length = 759

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 34  CDVVGVKSHKWSALVPHRSQHSREK 108
           C+V G +  K+ +L+ HR  H++EK
Sbjct: 368 CNVCGKQFRKYPSLLAHRENHAKEK 392



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>TR10B_HUMAN (O14763) Tumor necrosis factor receptor superfamily member 10B|
           precursor (Death receptor 5) (TNF-related
           apoptosis-inducing ligand receptor 2) (TRAIL receptor 2)
           (TRAIL-R2) (CD262 antigen)
          Length = 440

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 309 QCRQSTSKPPWSPAPC-PCRSGCPSG 383
           QC + T +   SP  C  CR+GCP G
Sbjct: 138 QCEEGTFREEDSPEMCRKCRTGCPRG 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,654,158
Number of Sequences: 219361
Number of extensions: 938632
Number of successful extensions: 3050
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3037
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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