Clone Name | rbart22e09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093C11, full insert sequence Length = 1425 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 294 ctccaactggagatcttatatgccgatcttcttctggtacttctggatttgattcaagaa 353 ||||||||| ||| ||||||| || |||| ||||| | |||||||||||||||||||||| Sbjct: 1143 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 1084 Query: 354 gagccacgtcatcatgacatgcggggcgatcctgacacaatatactggaaagccggagta 413 | ||| |||||||| ||||| || || ||||||||||| || || || ||||| | ||| Sbjct: 1083 tatccatgtcatcatcacatggggagcaatcctgacacagtacacagggaagccagtgta 1024 Query: 414 gaacttaaatgggccaccagtcttcatggtttgcatggcacagt 457 |||||| ||||||||||| |||| | ||| | ||||||||||| Sbjct: 1023 gaacttgaatgggccaccgctcttgaaggtcttcatggcacagt 980
>dbj|AK059612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F09, full insert sequence Length = 1359 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 294 ctccaactggagatcttatatgccgatcttcttctggtacttctggatttgattcaagaa 353 ||||||||| ||| ||||||| || |||| ||||| | |||||||||||||||||||||| Sbjct: 1069 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 1010 Query: 354 gagccacgtcatcatgacatgcggggcgatcctgacacaatatactggaaagccggagta 413 | ||| |||||||| ||||| || || ||||||||||| || || || ||||| | ||| Sbjct: 1009 tatccatgtcatcatcacatggggagcaatcctgacacagtacacagggaagccagtgta 950 Query: 414 gaacttaaatgggccaccagtcttcatggtttgcatggcacagt 457 |||||| ||||||||||| |||| | ||| | ||||||||||| Sbjct: 949 gaacttgaatgggccaccgctcttgaaggtcttcatggcacagt 906
>dbj|AK103990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B11, full insert sequence Length = 871 Score = 103 bits (52), Expect = 5e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 294 ctccaactggagatcttatatgccgatcttcttctggtacttctggatttgattcaagaa 353 ||||||||| ||| ||||||| || |||| ||||| | |||||||||||||||||||||| Sbjct: 590 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 531 Query: 354 gagccacgtcatcatgacatgcggggcgatcctgacacaatatactggaaagccggagta 413 | ||| |||||||| ||||| || || |||||| |||| || || || ||||| | ||| Sbjct: 530 tatccatgtcatcatcacatggggagcaatcctggcacagtacacagggaagccagtgta 471 Query: 414 gaacttaaatgggccaccagtcttcatggtttgcatggcacagt 457 |||||| ||||||||||| |||| | ||| | ||||||||||| Sbjct: 470 gaacttgaatgggccaccgctcttgaaggtcttcatggcacagt 427
>gb|BT016874.1| Zea mays clone Contig707 mRNA sequence Length = 1051 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 310 tatatgccgatcttcttctggtacttctggatttgattcaagaagagccacgtcatcatg 369 ||||||||||||||||||| |||||||||| ||||||||||| | ||| ||||||||| Sbjct: 350 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 409 Query: 370 acatgcggggcgatcctgacacaatatactggaaagccggagtagaacttaaatgggcca 429 ||||| || || |||||||| || || || || || || | ||||||||| ||||||||| Sbjct: 410 acatggggtgcaatcctgacgcagtacaccgggaaaccagtgtagaacttgaatgggcca 469 Query: 430 cc 431 || Sbjct: 470 cc 471
>gb|BT016861.1| Zea mays clone Contig694 mRNA sequence Length = 1412 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 310 tatatgccgatcttcttctggtacttctggatttgattcaagaagagccacgtcatcatg 369 ||||||||||||||||||| |||||||||| ||||||||||| | ||| ||||||||| Sbjct: 354 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 413 Query: 370 acatgcggggcgatcctgacacaatatactggaaagccggagtagaacttaaatgggcca 429 ||||| || || |||||||| || || || || || || | ||||||||| ||||||||| Sbjct: 414 acatggggtgcaatcctgacgcagtacaccgggaaaccagtgtagaacttgaatgggcca 473 Query: 430 cc 431 || Sbjct: 474 cc 475
>gb|AY103946.1| Zea mays PCO074099 mRNA sequence Length = 1530 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 310 tatatgccgatcttcttctggtacttctggatttgattcaagaagagccacgtcatcatg 369 ||||||||||||||||||| |||||||||| ||||||||||| | ||| ||||||||| Sbjct: 1089 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 1030 Query: 370 acatgcggggcgatcctgacacaatatactggaaagccggagtagaacttaaatgggcca 429 ||||| || || |||||||| || || || || || || | ||||||||| ||||||||| Sbjct: 1029 acatggggtgcaatcctgacgcagtacaccgggaaaccagtgtagaacttgaatgggcca 970 Query: 430 cc 431 || Sbjct: 969 cc 968
>dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 2371 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 332 acttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacac 391 |||||||||| ||||||||||| | ||| |||| |||||||||||| || ||||| |||| Sbjct: 2041 acttctggatctgattcaagaatatccaggtcaacatgacatgcggagcaatcctcacac 1982 Query: 392 aatatactggaaagccggagtagaacttaaatgggccaccagtctt 437 | || || ||||| |||| |||||||||||| ||||| ||| |||| Sbjct: 1981 agtagacaggaaacccggtgtagaacttaaacgggcctccactctt 1936
>emb|AJ311779.1|NTA311779 Nicotiana tabacum partial mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc4 gene) Length = 908 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 333 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacaca 392 |||||||||||| || | ||| | |||||||||||||||||| ||||| ||||| ||||| Sbjct: 658 cttctggatttggttaaggaatatccacgtcatcatgacatgaggggcaatcctaacaca 599 Query: 393 atatactggaaa 404 |||||||||||| Sbjct: 598 atatactggaaa 587
>dbj|AK068090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N13, full insert sequence Length = 1354 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 361 gtcatcatgacatgcggggcgatcctgacacaatatactggaaagccggagtagaactta 420 ||||||||| |||| || || ||||||||||| || || |||||||| | |||||||||| Sbjct: 1035 gtcatcatggcatgtggtgcaatcctgacacagtacacaggaaagccagtgtagaactta 976 Query: 421 aatgggccaccagtcttcatggtttgcatggcaca 455 |||||||| ||| |||||| ||| | ||||||||| Sbjct: 975 aatgggcctccactcttcaaggtcttcatggcaca 941
>dbj|AK058511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G08, full insert sequence Length = 1246 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 361 gtcatcatgacatgcggggcgatcctgacacaatatactggaaagccggagtagaactta 420 ||||||||| |||| || || ||||||||||| || || |||||||| | |||||||||| Sbjct: 918 gtcatcatggcatgtggtgcaatcctgacacagtacacaggaaagccagtgtagaactta 859 Query: 421 aatgggccaccagtcttcatggtttgcatggcaca 455 |||||||| ||| |||||| ||| | ||||||||| Sbjct: 858 aatgggcctccactcttcaaggtcttcatggcaca 824
>gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarate/malate translocator mRNA, complete cds; nuclear gene for mitochondrial product Length = 1416 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 310 tatatgccgatcttcttctggtacttctggatttgattcaagaagagccacgtcatcatg 369 |||||||| |||||||||| ||||||||| ||||||||||| | ||| ||||||||| Sbjct: 1091 tatatgccaatcttcttctcaatcttctggatctgattcaagaatatccaggtcatcatg 1032 Query: 370 acatgcggggcgatcctgacacaatatactggaaagccggagtagaacttaaatgggcca 429 ||||| || || ||||||||||| || || || || || | ||||||||| ||||| ||| Sbjct: 1031 acatggggtgcaatcctgacacagtacacggggaaaccagtgtagaacttgaatggacca 972 Query: 430 cc 431 || Sbjct: 971 cc 970
>emb|AJ311778.1|NTA311778 Nicotiana tabacum mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc3 gene) Length = 1144 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 333 cttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacaca 392 |||||||||||| || | ||| | |||||||||||||||||| || || ||||| ||||| Sbjct: 903 cttctggatttggttaaggaatatccacgtcatcatgacatgaggcgcaatcctaacaca 844 Query: 393 atatactggaaa 404 |||||||||||| Sbjct: 843 atatactggaaa 832
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03 map S20262S, complete sequence Length = 149553 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 382 atcctgacacaatatactggaaagccggagtagaacttaaatgggccaccagtcttcatg 441 ||||||||||| || || |||||||| | |||||||||||||||||| ||| |||||| | Sbjct: 82479 atcctgacacagtacacaggaaagccagtgtagaacttaaatgggcctccactcttcaag 82420 Query: 442 gtttgcatggcaca 455 || | ||||||||| Sbjct: 82419 gtcttcatggcaca 82406
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 382 atcctgacacaatatactggaaagccggagtagaacttaaatgggccaccagtcttcatg 441 ||||||||||| || || |||||||| | |||||||||||||||||| ||| |||||| | Sbjct: 13366126 atcctgacacagtacacaggaaagccagtgtagaacttaaatgggcctccactcttcaag 13366067 Query: 442 gtttgcatggcaca 455 || | ||||||||| Sbjct: 13366066 gtcttcatggcaca 13366053 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 7314838 ttacaacaaataatgtgatt 7314819
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 382 atcctgacacaatatactggaaagccggagtagaacttaaatgggccaccagtcttcatg 441 ||||||||||| || || |||||||| | |||||||||||||||||| ||| |||||| | Sbjct: 13446305 atcctgacacagtacacaggaaagccagtgtagaacttaaatgggcctccactcttcaag 13446246 Query: 442 gtttgcatggcaca 455 || | ||||||||| Sbjct: 13446245 gtcttcatggcaca 13446232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 7384924 ttacaacaaataatgtgatt 7384905
>dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1783 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 332 acttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacac 391 |||||||||| ||||||||||| | ||| |||| ||||||||| || | ||||| |||| Sbjct: 1494 acttctggatctgattcaagaatatccaagtcaacatgacatgtggaccaatcctcacac 1435 Query: 392 aatatactggaaagccggagtagaacttaaatgggccaccagtctt 437 | || || ||||| |||| |||||||||||| ||||| ||| |||| Sbjct: 1434 agtagacaggaaacccggtgtagaacttaaacgggcctccactctt 1389
>dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator, complete cds Length = 1446 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 332 acttctggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacac 391 |||||||||| ||||||||||| | ||| |||| ||||||||| || | ||||| |||| Sbjct: 1021 acttctggatctgattcaagaatatccaagtcaacatgacatgtggaccaatcctcacac 962 Query: 392 aatatactggaaagccggagtagaacttaaatgggccaccagtctt 437 | || || ||||| |||| |||||||||||| ||||| ||| |||| Sbjct: 961 agtagacaggaaacccggtgtagaacttaaacgggcctccactctt 916
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 294 ctccaactggagatcttatatgccgatcttcttctggtacttctggatttgattcaagaa 353 ||||||||| ||| ||||||| || |||| ||||| | |||||||||||||||||||||| Sbjct: 53309 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 53250 Query: 354 gagccacgtcatc 366 | ||| |||||| Sbjct: 53249 tatccatgtcatc 53237 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Minus Query: 382 atcctgacacaatatactggaaagccggagtagaacttaaatgggccaccagtcttcatg 441 ||||||||||| || || || ||||| | ||||||||| ||||||||||| |||| | | Sbjct: 53130 atcctgacacagtacacagggaagccagtgtagaacttgaatgggccaccgctcttgaag 53071 Query: 442 gtttgcatggcacagt 457 || | ||||||||||| Sbjct: 53070 gtcttcatggcacagt 53055
>gb|AY700673.1| Helianthus tuberosus putative dicarboxylate/tricarboxylate carrier mRNA, partial cds Length = 669 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 363 catcatgacatgcggggcgatcctgacacaatatactggaaagccggagtagaacttaaa 422 ||||||||| || || |||||||| ||||||||||||||||| || | |||||||| || Sbjct: 669 catcatgacgtggggagcgatcctaacacaatatactggaaatcctgtatagaacttgaa 610 Query: 423 tgggccaccagtcttcatggtttgcatggcaca 455 || ||||||| ||| | ||||| ||||||||| Sbjct: 609 gggcccaccagacttgagggttttcatggcaca 577
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 294 ctccaactggagatcttatatgccgatcttcttctggtacttctggatttgattcaagaa 353 ||||||||| ||| ||||||| || |||| ||||| | |||||||||||||||||||||| Sbjct: 6615255 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 6615196 Query: 354 gagccacgtcatc 366 | ||| |||||| Sbjct: 6615195 tatccatgtcatc 6615183 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Minus Query: 382 atcctgacacaatatactggaaagccggagtagaacttaaatgggccaccagtcttcatg 441 ||||||||||| || || || ||||| | ||||||||| ||||||||||| |||| | | Sbjct: 6615076 atcctgacacagtacacagggaagccagtgtagaacttgaatgggccaccgctcttgaag 6615017 Query: 442 gtttgcatggcacagt 457 || | ||||||||||| Sbjct: 6615016 gtcttcatggcacagt 6615001
>gb|BT013008.1| Lycopersicon esculentum clone 114243R, mRNA sequence Length = 1356 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactggaaa 404 ||||| ||| |||||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct: 975 gaagatccaagtcatcataacatgaggggcaatcctaacacaatatactggaaa 922
>gb|DQ056436.1| Lycopersicon esculentum oxoglutarate/malate translocator (ACI36) mRNA, complete cds Length = 1339 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactggaaa 404 ||||| ||| |||||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct: 879 gaagatccaagtcatcataacatgaggggcaatcctaacacaatatactggaaa 826
>gb|AF010583.1|AF010583 Oryza sativa 2-oxoglutarate/malate translocator mRNA, partial cds Length = 949 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 362 tcatcatgacatgcggggcgatcctgacacaatatactggaaagccggagtagaacttaa 421 |||||||| |||| || || ||||||||||| || || ||||| || | || ||||||| Sbjct: 604 tcatcatggcatgtggtgcaatcctgacacagtacacaggaaacccagtgttaaacttaa 545 Query: 422 atgggccaccagtcttcatggtttgcatggcaca 455 |||||| ||| |||||| ||||| ||||||||| Sbjct: 544 atgggcgtccactcttcaaggttttcatggcaca 511
>emb|AJ299250.1|NTA299250 Nicotiana tabacum mRNA for mitochondrial 2-oxoglutarate/malate carrier (momc1 gene) Length = 1297 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 361 gtcatcatgacatgcggggcgatcctgacacaatatactggaaagccgg 409 |||||||| ||||| || || ||||| ||||||||||||||||| |||| Sbjct: 915 gtcatcataacatgaggagcaatcctaacacaatatactggaaatccgg 867
>emb|AJ311777.1|NTA311777 Nicotiana tabacum partial mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc2 gene) Length = 1193 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 361 gtcatcatgacatgcggggcgatcctgacacaatatactggaaagccgg 409 |||||||| ||||| || || ||||| ||||||||||||||||| |||| Sbjct: 836 gtcatcataacatgaggagcaatcctaacacaatatactggaaatccgg 788
>emb|X99853.1|STOXMATR S.tuberosum mRNA for oxoglutarate malate translocator Length = 1398 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 gtcatcatgacatgcggggcgatcctgacacaatatactggaaa 404 |||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 879 gtcatcataacatgaggggcaatcctaatacaatatactggaaa 836
>emb|AJ311776.1|NTA311776 Nicotiana tabacum mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc1 gene) Length = 1230 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 gtcatcatgacatgcggggcgatcctgacacaatatactggaaa 404 |||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 899 gtcatcataacatgaggagcaatcctaacacaatatactggaaa 856
>ref|NM_121981.3| Arabidopsis thaliana binding / oxidative phosphorylation uncoupler AT5G19760 mRNA, complete cds Length = 1521 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 1001 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 951
>gb|AY056307.1| Arabidopsis thaliana putative oxoglutarate/malate translocator protein (At5g19760) mRNA, complete cds Length = 928 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 855 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 805
>gb|AF360153.1| Arabidopsis thaliana putative oxoglutarate/malate translocator protein (At5g19760) mRNA, complete cds Length = 1219 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 964 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 914
>emb|BX830426.1|CNS0A1DP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB7ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1157 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 949 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 899
>emb|BX831268.1|CNS0A0UC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS73ZB11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1270 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 950 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 900
>emb|BX831238.1|CNS0A0TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1160 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 949 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 899
>gb|AY085901.1| Arabidopsis thaliana clone 19510 mRNA, complete sequence Length = 1166 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 964 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 914
>emb|AJ311780.1|ATH311780 Arabidopsis thaliana mRNA for mitochondrial dicarboxylate/tricarboxylate carrier (dtc gene) Length = 1192 Score = 46.1 bits (23), Expect = 0.100 Identities = 44/51 (86%) Strand = Plus / Minus Query: 351 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactgg 401 ||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 948 gaagatccatgtcatcatgacgtgaggggcaatcctgacacagtaaactgg 898
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tagtgtctcatggctgtgccc 91 ||||||||||||||||||||| Sbjct: 171941 tagtgtctcatggctgtgccc 171961
>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence Length = 312488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gtgattatgtgattattgtaa 161 ||||||||||||||||||||| Sbjct: 23828 gtgattatgtgattattgtaa 23848
>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence Length = 236838 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gtgattatgtgattattgtaa 161 ||||||||||||||||||||| Sbjct: 121233 gtgattatgtgattattgtaa 121213
>gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, complete sequence Length = 149301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctgtgcccagccaacagaagt 104 ||||||||||||||||||||| Sbjct: 93799 ctgtgcccagccaacagaagt 93779
>emb|BX510646.5| Zebrafish DNA sequence from clone CH211-221B16 in linkage group 9, complete sequence Length = 200321 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 atgtgattatgtgattattgt 159 ||||||||||||||||||||| Sbjct: 79993 atgtgattatgtgattattgt 80013
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatta 147 ||||||||||||||||||||| Sbjct: 41482719 ttacaacaaataatgtgatta 41482699
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatta 147 ||||||||||||||||||||| Sbjct: 39012 ttacaacaaataatgtgatta 38992
>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence Length = 206482 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 taaaactctgtctaccaaaaa 229 ||||||||||||||||||||| Sbjct: 161118 taaaactctgtctaccaaaaa 161098
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatta 147 ||||||||||||||||||||| Sbjct: 50918 ttacaacaaataatgtgatta 50898
>dbj|AK120633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I18, full insert sequence Length = 5246 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ttacaacaaataatgtgatta 147 ||||||||||||||||||||| Sbjct: 2125 ttacaacaaataatgtgatta 2145
>gb|AC132383.5| Mus musculus BAC clone RP23-434M19 from 10, complete sequence Length = 212242 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tagtgtctcatggctgtgccc 91 ||||||||||||||||||||| Sbjct: 12421 tagtgtctcatggctgtgccc 12441
>gb|AC127565.5| Mus musculus BAC clone RP24-292K9 from chromosome 7, complete sequence Length = 188650 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 taatgtgattatgtgattat 156 |||||||||||||||||||| Sbjct: 26877 taatgtgattatgtgattat 26858
>gb|AC120406.27| Mus musculus chromosome 12, clone RP24-418L10, complete sequence Length = 198624 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctctgtctaccaaaaacaac 233 |||||||||||||||||||| Sbjct: 67519 ctctgtctaccaaaaacaac 67500
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 48331 ttacaacaaataatgtgatt 48350
>gb|AC147358.2| Xenopus tropicalis clone CH216-71J8, complete sequence Length = 170238 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 taatgtgattatgtgattattgta 160 ||||||||| |||||||||||||| Sbjct: 116396 taatgtgatgatgtgattattgta 116419
>gb|AC147893.2| Xenopus tropicalis clone CH216-36J13, complete sequence Length = 159658 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 taatgtgattatgtgattattgta 160 ||||||||| |||||||||||||| Sbjct: 134591 taatgtgatgatgtgattattgta 134568
>gb|BC074291.1| Xenopus laevis MGC84082 protein, mRNA (cDNA clone MGC:84082 IMAGE:6949291), complete cds Length = 2245 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 ataatgtgattatgtgattattgtaaca 163 |||||||||| ||||||||||| ||||| Sbjct: 1661 ataatgtgataatgtgattattataaca 1688
>gb|BC075192.1| Xenopus laevis cDNA clone IMAGE:7007980, partial cds Length = 863 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cttctggtacttctggattt 343 |||||||||||||||||||| Sbjct: 390 cttctggtacttctggattt 409
>ref|XM_867954.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B, transcript variant 1 (LOC534005), mRNA Length = 6330 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gagatgcaaagctgctgaaa 258 |||||||||||||||||||| Sbjct: 1656 gagatgcaaagctgctgaaa 1637
>ref|XM_881052.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B, transcript variant 3 (LOC534005), mRNA Length = 5013 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gagatgcaaagctgctgaaa 258 |||||||||||||||||||| Sbjct: 388 gagatgcaaagctgctgaaa 369
>ref|XM_881032.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B, transcript variant 2 (LOC534005), mRNA Length = 4872 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gagatgcaaagctgctgaaa 258 |||||||||||||||||||| Sbjct: 388 gagatgcaaagctgctgaaa 369
>gb|AC146278.3| Pan troglodytes BAC clone CH251-26J9 from X, complete sequence Length = 199900 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ttacaacaaataatgtgattatgt 150 |||||||||| ||||||||||||| Sbjct: 45274 ttacaacaaaaaatgtgattatgt 45297
>ref|XM_711207.1| Candida albicans SC5314 hypothetical protein (CaO19_5231), mRNA Length = 1236 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccccaattacaacaaataat 140 |||||||||||||||||||| Sbjct: 170 ccccaattacaacaaataat 189
>gb|AC104880.13| Mus musculus chromosome 12, clone RP23-141H24, complete sequence Length = 206848 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctctgtctaccaaaaacaac 233 |||||||||||||||||||| Sbjct: 28075 ctctgtctaccaaaaacaac 28094
>emb|CT009521.5| M.truncatula DNA sequence from clone MTH2-81E13 on chromosome 3, complete sequence Length = 56728 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 134 aaataatgtgattatgtgattattgtaa 161 |||||||||||||||| || |||||||| Sbjct: 25246 aaataatgtgattatgagagtattgtaa 25219
>ref|XM_531921.2| PREDICTED: Canis familiaris similar to jumonji domain containing 1B (LOC474695), mRNA Length = 6117 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gagatgcaaagctgctgaaa 258 |||||||||||||||||||| Sbjct: 1732 gagatgcaaagctgctgaaa 1713
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acaagaccagatggcacaag 55 |||||||||||||||||||| Sbjct: 1135059 acaagaccagatggcacaag 1135040
>emb|AL356464.15| Human DNA sequence from clone RP11-38O23 on chromosome Xp11.23-11.4 Contains the 3'end of the SSX6 gene for synovial sarcoma X breakpoint 6, a novel gene similar to lysozyme C (1,4-beta-N-acetylmuramidase), a zinc finger protein 21 (ZNF21) pseudogene, an ornithine aminotransferase (gyrate atrophy) (OAT) pseudogene, a SSX2 pseudogene (psiSSX2), a S100 calcium binding protein A11 (calgizzarin)(S100A11) pseudogene, the 5'end of the SSX5 gene for synovial sarcoma X breakpoint 5 and one CpG island, complete sequence Length = 73851 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgattatgt 150 |||||||||| ||||||||||||| Sbjct: 26572 ttacaacaaaaaatgtgattatgt 26549
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 124464 ttacaacaaataatgtgatt 124483
>emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 in linkage group 14, complete sequence Length = 164868 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aataatgtgattatgtgatt 154 |||||||||||||||||||| Sbjct: 12151 aataatgtgattatgtgatt 12170
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 9307157 ttacaacaaataatgtgatt 9307138
>ref|XM_393176.2| PREDICTED: Apis mellifera similar to GA19712-PA (LOC409678), mRNA Length = 4497 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 atcttcttctggtacttctg 338 |||||||||||||||||||| Sbjct: 2020 atcttcttctggtacttctg 2001
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 9307042 ttacaacaaataatgtgatt 9307023
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ttacaacaaataatgtgatt 146 |||||||||||||||||||| Sbjct: 131898 ttacaacaaataatgtgatt 131917
>emb|Z98304.1|HS54B20 Human DNA sequence from clone RP1-54B20 on chromosome Xp11.1-11.3 Contains the 5' end of the SSX6 gene for synovial sarcoma X breakpoint 6, two novel genes similar to a C2H2 type zinc finger protein, a novel gene, a novel gene similar to lysozyme C (1,4-beta-N-acetylmuramidase), the ZNF81 gene for zinc finger protein 81 (HFZ20) and three CpG islands, complete sequence Length = 209618 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ttacaacaaataatgtgattatgt 150 |||||||||| ||||||||||||| Sbjct: 12309 ttacaacaaaaaatgtgattatgt 12286
>dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09E08, TM0265, complete sequence Length = 100864 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgatcctgacacaatatact 399 |||||||||||||||||||| Sbjct: 91519 cgatcctgacacaatatact 91500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,159,872 Number of Sequences: 3902068 Number of extensions: 4159872 Number of successful extensions: 79358 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79078 Number of HSP's gapped (non-prelim): 280 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)