ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PI4K_DICDI (P54677) Phosphatidylinositol 4-kinase (EC 2.7.1.67) ... 28 8.6
2D250_ASFB7 (P32092) Protein D250R 28 8.6

>PI4K_DICDI (P54677) Phosphatidylinositol 4-kinase (EC 2.7.1.67) (PI4-kinase)|
            (PtdIns-4-kinase) (PI4K-alpha)
          Length = 1093

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 73   TASFHNLKK*KGRSNTTLNHFVITWKTPREIPWSSTKKNKI 195
            T S HNLKK      T LN+F  T+  P  + + + + N I
Sbjct: 889  TMSLHNLKKSTPGFTTLLNYFKSTYGDPSGLRFRTAQSNFI 929



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>D250_ASFB7 (P32092) Protein D250R|
          Length = 250

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
 Frame = +3

Query: 69  YYSILPQLKKVKGSFQ--------HYLEPFCNNMENPKGNSLVFYKKK 188
           YY ILP+ KK    F         ++L   C ++E P  N  + Y+ +
Sbjct: 158 YYQILPEFKKSMSYFDGKTEYKHIYFLAMLCKSLEEPNMNLSLQYENR 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,563,915
Number of Sequences: 219361
Number of extensions: 618621
Number of successful extensions: 1584
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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