>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = -1

Query: 396 LQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQY 280
           L+ PFS+R+T+ESGK ++A  VIPANW P   Y S VQ+
Sbjct: 230 LKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQF 268

>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)|
           (Fragment)
          Length = 191

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = -1

Query: 396 LQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQY 280
           L+ PFS+R+T+ESGK ++A  +IPANW P   Y S VQ+
Sbjct: 152 LKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 190

>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1|
          Length = 246

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = -1

Query: 396 LQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQY 280
           L+ PFS+R+T+E G  LV D VIPANW P T Y S +Q+
Sbjct: 206 LKGPFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSKLQF 244

>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = -1

Query: 396 LQAPFSMRITN-ESGKTLVADKVIPANWAPSTFYRSIVQY 280
           L+AP S+R+T+ ESGKT+VA  VIPANW P   Y+S V +
Sbjct: 234 LRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -1

Query: 396 LQAPFSMRITN-ESGKTLVADKVIPANWAPSTFYRSIVQY 280
           L+ PF++R+T+ ES K +VA  VIPANW P   YRSIV +
Sbjct: 220 LRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 396 LQAPFSMRITNES-GKTLVADKVIPANWAPSTFYRSIVQYS 277
           L+ PFS+++T  S GKTL A  V+P NWAP   Y S + +S
Sbjct: 221 LKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNFS 261

>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -1

Query: 396 LQAPFSMRITNE-SGKTLVADKVIPANWAPSTFYRSIVQY 280
           L+ PF++R+T+  SGK ++A  VIP  W+P   Y S V +
Sbjct: 218 LKGPFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVNF 257

>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 396 LQAPFSMRITNESG-KTLVADKVIPANWAPSTFYRSIVQYS 277
           L+ PFS+++T  S  KTL A  VIP+NW P   Y S + +S
Sbjct: 228 LKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNFS 268

>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)|
          Length = 263

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 399 RLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRS 292
           +L  PF++R T E G    A+ VIP  W   T Y S
Sbjct: 227 KLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYES 262

>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l|
           1.0101 and 1.0102)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 399 RLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRS 292
           +L  PF++R T E G    A+ VIP  W   T Y +
Sbjct: 229 KLTGPFTVRYTTEGGTKGEAEDVIPEGWKADTAYEA 264

>MPAL2_LOLPR (P14947) Pollen allergen Lol p 2-A (Lol p II-A)|
          Length = 97

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 396 LQAPFSMRITNESGKTLVADKVIPANWAPSTFYR 295
           L+ PF+ R  +E G   V D V+PA++   T Y+
Sbjct: 62  LKGPFNFRFVSEKGMRNVFDDVVPADFKVGTTYK 95

>GHRHR_RAT (Q02644) Growth hormone-releasing hormone receptor precursor (GHRH|
           receptor) (GRF receptor) (GRFR)
          Length = 464

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 4/28 (14%)
 Frame = +3

Query: 267 SSFSCTGRWSGKRCWAPS----WPG*PC 338
           SS  C G W G  CW P+    W   PC
Sbjct: 51  SSMGCPGTWDGLLCWPPTGSGQWVSLPC 78

>DSG1_BOVIN (Q03763) Desmoglein-1 precursor (Desmosomal glycoprotein 1) (DG1)|
           (DGI) (Pemphigus foliaceus antigen)
          Length = 1043

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 143 DTRRPNTLIKNILGSTHAKRSVIVRYQI*PMYAYDSK***VQQLQLYWTMER*KVLGAQL 322
           D  RP+T ++ ++G                + A DSK   +  L+   TME+ K+LG + 
Sbjct: 413 DANRPSTTVRYVMGRNPTD-----------LLAIDSKTA-IITLRNKVTMEQYKILGGKY 460

Query: 323 AGMTLSATSVL----PDSLVMRMEKGAWR 397
            G  LS    L      ++V+ +E G W+
Sbjct: 461 QGTILSIDDALQRTCTGTIVINLENGGWK 489

>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)|
          Length = 263

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 399 RLQAPFSMRITNESGKTLVADKVIPANWAPSTFY 298
           +L  PF++R T E G     + VIP  W   T Y
Sbjct: 227 KLTGPFTVRYTTEGGTKSEFEDVIPEGWKADTSY 260

>RFIP5_MOUSE (Q8R361) Rab11 family-interacting protein 5 (Rab11-FIP5)|
           (Rab11-interacting protein Rip11)
          Length = 645

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 400 PPPGALLHAHHQRVRQDAGGRQGHPGQLGAQHL--LPLHRPVQLKLLNSSSFGI 245
           P  G   H HHQ + +   GR+G  G+ G+  L   P H     +   SS FG+
Sbjct: 451 PRMGLFHHHHHQGLSRSEQGRRGSVGEKGSPSLGASPHHSSTGEEKAKSSWFGL 504

>GHRHR_MOUSE (P32082) Growth hormone-releasing hormone receptor precursor (GHRH|
           receptor) (GRF receptor) (GRFR)
          Length = 423

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 4/28 (14%)
 Frame = +3

Query: 267 SSFSCTGRWSGKRCWAPS----WPG*PC 338
           +S  C G W G  CW P+    W   PC
Sbjct: 51  TSLGCPGTWDGLLCWPPTGSGQWVSLPC 78

>GRK_DROME (P42287) Protein gurken precursor|
          Length = 295

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 15/76 (19%)
 Frame = +3

Query: 147 PDDPTP*SKTSSVVPMQND--------P**YDTKSSQCM-------HMIPNDDEFSSFSC 281
           P DP+  S   S  P  ND        P      +S C+       H + N+  F S  C
Sbjct: 155 PPDPSSSSTPDSTTPSPNDKETEIQMLPCSEAYNTSFCLNGGHCFQHPMVNNTVFHSCLC 214

Query: 282 TGRWSGKRCWAPSWPG 329
              + G+RC   SW G
Sbjct: 215 VNDYDGERCAYKSWNG 230

>MURD_SHEVI (Q9F1N2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 449

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -3

Query: 325 GQLGAQHLLPLHRPVQLKLLNSSSFGIICIHWLDLVSYYHGSFCMGTTEDVFD 167
           G +G   L  L +PV L +L  SSF +   H L+ +S    + C+  +ED  D
Sbjct: 142 GNIGIPVLDLLQKPVDLYILELSSFQLETTHSLNCIS----ATCLNISEDHMD 190

>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 381 SMRITNESGKTLVADKVIPANW 316
           S ++T   G+TLV++ V P+NW
Sbjct: 221 SFQVTTSDGRTLVSNDVAPSNW 242

>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)|
          Length = 269

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 399 RLQAPFSMRITNESGKTLVADKVIPANWAPST 304
           +L  PF++R T E G     + VIP  W   T
Sbjct: 233 KLTGPFTVRYTTEGGTKAEFEDVIPEGWKADT 264

>RL4_PYRHO (O59420) 50S ribosomal protein L4P|
          Length = 255

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 313 RPVGRDDLVGHQRLAGLVGDAHGEGRLE 396
           +P GRD + G +R+   +G  HG  R+E
Sbjct: 44  QPQGRDPMAGKRRVTENIGKGHGMARVE 71

>RL4_PYRAB (Q9V1T6) 50S ribosomal protein L4P|
          Length = 255

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 313 RPVGRDDLVGHQRLAGLVGDAHGEGRLE 396
           +P GRD + G +R+   +G  HG  R+E
Sbjct: 44  QPQGRDPMAGKRRVTENIGKGHGMARVE 71

>DLL1_MOUSE (Q61483) Delta-like protein 1 precursor (Drosophila Delta homolog|
           1) (Delta1)
          Length = 722

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 249 PNDDEFSSFSCTGRWSGKRCWAPSWPG*PCRPP 347
           P DD F  F+C  R  G++   P W G  C  P
Sbjct: 193 PRDDAFGHFTCGDR--GEKMCDPGWKGQYCTDP 223

>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 381 SMRITN-ESGKTLVADKVIPANWAPSTFYRSIVQY 280
           S R+T+  +G+T+ A  V PANW+    Y+S   +
Sbjct: 227 SFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANF 261

>AMY_STRLI (Q05884) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 919

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 397 PPGALLHAHHQRVRQDAGGRQGHPGQLGAQHLL---PLHRPVQLK 272
           P G  L A  + +R+    R G P +  A HL    PLHRP +L+
Sbjct: 726 PRGRPLQARRRELRRLGPVRLGRPRRREAHHLARHPPLHRPGRLR 770

>RL4_PYRKO (Q5JDI0) 50S ribosomal protein L4P|
          Length = 255

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 313 RPVGRDDLVGHQRLAGLVGDAHGEGRLEAV 402
           +P GRD   G +R+   +G  HG  R+E +
Sbjct: 44  QPQGRDPQAGKRRVTENIGKGHGMARVERI 73

>YUXG_BACSU (P40747) Hypothetical oxidoreductase yuxG (EC 1.-.-.-) (ORF2)|
          Length = 689

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 295 AVKGAGRPVGRDDLVGHQRLAGLVGDAHGEGRLEAV 402
           A +G    V   ++ G Q++AG + DA+G+GR  AV
Sbjct: 448 AAEGGHVIVADLNIEGAQKIAGEINDAYGKGRAMAV 483

>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 87  SPP*PTDVFKTHMHDDAYMTPDDPTP*SKTSSVVPMQNDP 206
           SPP PT V+K         +P  PTP  K  S  P  + P
Sbjct: 242 SPPPPTPVYKYKSPPPPMHSPPPPTPVYKYKSPPPPMHSP 281

>HNFAB_XENLA (Q91739) Hepatocyte nuclear factor 1-alpha B (HNF-1A-B)|
           (HNF-1-alpha B) (LFB1) (XLFB1B)
          Length = 592

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = -3

Query: 394 PGALLHAHHQRVRQDAGGRQGHPGQLGAQHLLPLHRPVQLKLLNSSSFGIICIHWLDLVS 215
           P   + +HH     D+ G Q H       HL P HR   +  ++S+S     IH+ +  S
Sbjct: 509 PSKQVVSHHPTAHGDSPGSQLHNQDSSILHLHPSHRLSPIPTVSSASL----IHYHNSSS 564

Query: 214 YYHGSFCMGTTEDVFD 167
             + S  +  + +  D
Sbjct: 565 PENHSHLLSPSHNTID 580

>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)|
           (Ath-ExpAlpha-1.14)
          Length = 252

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 381 SMRITNESGKTLVADKVIPANWAPSTFYRSIVQY 280
           S  IT   G T V   V+P++W+    Y S VQ+
Sbjct: 219 SFSITTTDGATRVFLNVVPSSWSFGQIYSSNVQF 252

>LARG2_CHICK (Q66PG4) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)|
           (Glycosyltransferase-like 1B)
          Length = 739

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 116 LEYVGGLWRRGTFACA-FPRPPS 51
           LEY G L RR  F CA  P PPS
Sbjct: 388 LEYDGNLLRRELFGCASLPSPPS 410

>KLHL4_HUMAN (Q9C0H6) Kelch-like protein 4|
          Length = 718

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -3

Query: 400 PPPGALLHAHHQRVRQDAGGRQGHPGQLGAQHLLPLHRPVQLKLLNSSS 254
           P    + HA  Q V  D   RQG  G L +   LPL  P  L  L +SS
Sbjct: 340 PDEETIFHALMQWVGHDVQNRQGELGMLLSYIRLPLLPPQLLADLETSS 388

>CHIT_BRUMA (P29030) Endochitinase precursor (EC 3.2.1.14) (MF1 antigen)|
          Length = 504

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -2

Query: 236 TLARFGIVLSRI--VLHGYYRGCF 171
           TL  F I+LS    V+HGY RGC+
Sbjct: 5   TLILFFIILSNTITVIHGYVRGCY 28

>RM04_YEAST (P36517) 60S ribosomal protein L4, mitochondrial precursor (YmL4)|
           (MRP-L4)
          Length = 319

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = +2

Query: 86  LSSIAHRRIQDTHAR-----RRLHDTRRPNTLIKNILGSTH 193
           +  + H+   D H+      R  +   R N L+KNI+GSTH
Sbjct: 95  IPELRHKSFNDLHSLWYNCLREQNVLARENHLLKNIVGSTH 135

>PACR_HUMAN (P41586) Pituitary adenylate cyclase-activating polypeptide type I|
           receptor precursor (PACAP type I receptor) (PACAP-R-1)
          Length = 468

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
 Frame = +3

Query: 213 YDTKSSQCMHMIPNDDEFSSFS-----CTGRWSGKRCWAPSWPG 329
           +  + + C+  I   +E   F+     C G W    CW P+  G
Sbjct: 27  FKKEQAMCLEKIQRANELMGFNDSSPGCPGMWDNITCWKPAHVG 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,352,535
Number of Sequences: 219361
Number of extensions: 1170356
Number of successful extensions: 3422
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3418
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)