Clone Name | rbart22e04 |
---|---|
Clone Library Name | barley_pub |
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 280 bits (141), Expect = 3e-72 Identities = 181/194 (93%), Gaps = 9/194 (4%) Strand = Plus / Minus Query: 216 gataccaaatctagccaatgtatgcatatgattccaaatgatga-------tgagttcag 268 ||||||||||| |||||||| |||||| ||||||||||||||| | ||||||| Sbjct: 895 gataccaaatcaagccaatgcatgcat--gattccaaatgatgagttcggttcagttcag 838 Query: 269 cagcttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccggg 328 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 837 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 778 Query: 329 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggc 718 Query: 389 gcctggaggcggtg 402 |||||||||||||| Sbjct: 717 gcctggaggcggtg 704
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 258 bits (130), Expect = 1e-65 Identities = 133/134 (99%) Strand = Plus / Minus Query: 269 cagcttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccggg 328 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 810 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 751 Query: 329 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggc 691 Query: 389 gcctggaggcggtg 402 |||||||||||||| Sbjct: 690 gcctggaggcggtg 677
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 256 bits (129), Expect = 5e-65 Identities = 138/141 (97%) Strand = Plus / Minus Query: 262 agttcagcagcttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagtt 321 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 823 agttcagcagcttcagctgtactggacgatggaacggtagaaggtgctgggcgcccagtt 764 Query: 322 ggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatgga 381 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 763 ggccgggatgaccttgtcggccaccagcgacttgccggactcgttggtgatgcgcatgga 704 Query: 382 gaagggcgcctggaggcggtg 402 ||||||||||||||||||||| Sbjct: 703 gaagggcgcctggaggcggtg 683
>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene) Length = 1219 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 269 cagcttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccggg 328 |||| ||||||| ||||||||||||||||||| ||| |||||| ||||| ||||||||| Sbjct: 911 cagcctcagctgaactggacgatggagcggtaggaggcgctgggggcccaattggccggg 852 Query: 329 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggc 388 |||| ||||||||| || ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 851 atgatcttgtcggcgacgagctgcttgccggactcgttggtgatgcgcatggagaagggc 792 Query: 389 gcctggaggcggtg 402 |||||||||||||| Sbjct: 791 gcctggaggcggtg 778 Score = 54.0 bits (27), Expect = 4e-04 Identities = 43/48 (89%), Gaps = 4/48 (8%) Strand = Plus / Minus Query: 109 tattcaagacacacatgca----cgacgacgcctacatgacacccgac 152 |||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1072 tattgaagacacacatgcaggatcgacgacgcctacatgacacccgac 1025 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 acacacaaacagtaataacttatgat 30 |||||||||| ||||||||||||||| Sbjct: 1186 acacacaaactgtaataacttatgat 1161
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds Length = 948 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 882 ttcagctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatga 823 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||| ||| || ||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 822 ccttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcgcct 763 Query: 393 ggaggcggtg 402 |||||||||| Sbjct: 762 ggaggcggtg 753
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 145 bits (73), Expect = 1e-31 Identities = 115/129 (89%) Strand = Plus / Minus Query: 274 tcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgac 333 ||||||| ||||||||| ||||||||| |||| ||||| |||||||||||||||||| Sbjct: 859 tcagctgaactggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgac 800 Query: 334 cttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 |||| |||||||||| |||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 799 attgttggccaccagcttcttgccggagtcgctggtgatgcgcatggagaagggcccctg 740 Query: 394 gaggcggtg 402 ||||||||| Sbjct: 739 gaggcggtg 731
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 145 bits (73), Expect = 1e-31 Identities = 115/129 (89%) Strand = Plus / Minus Query: 274 tcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgac 333 ||||||| ||||||||| ||||||||| |||| ||||| |||||||||||||||||| Sbjct: 891 tcagctgaactggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgac 832 Query: 334 cttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 |||| |||||||||| |||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 831 attgttggccaccagcttcttgccggagtcgctggtgatgcgcatggagaagggcccctg 772 Query: 394 gaggcggtg 402 ||||||||| Sbjct: 771 gaggcggtg 763
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4 (OSJNBa0010C11.2), mRNA Length = 1340 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 969 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 910 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 909 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 850 Query: 393 ggag 396 |||| Sbjct: 849 ggag 846
>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds Length = 1249 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 925 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 866 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 865 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 806 Query: 393 ggag 396 |||| Sbjct: 805 ggag 802
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 16771 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 16712 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 16711 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 16652 Query: 393 ggag 396 |||| Sbjct: 16651 ggag 16648 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 4068 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 4127 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 4128 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 4187 Query: 397 gcggtg 402 |||||| Sbjct: 4188 gcggtg 4193
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 21341758 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 21341699 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 21341698 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 21341639 Query: 393 ggag 396 |||| Sbjct: 21341638 ggag 21341635 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 21311303 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 21311362 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 21311363 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 21311422 Query: 396 ggcggtg 402 ||||||| Sbjct: 21311423 ggcggtg 21311429 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 21329054 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 21329113 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 21329114 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 21329173 Query: 397 gcggtg 402 |||||| Sbjct: 21329174 gcggtg 21329179 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 20947292 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 20947251 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Plus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 21317205 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 21317264 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 21317265 gagggagaaggggccctggaggcggtg 21317291
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full insert sequence Length = 1290 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 982 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 923 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 922 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 863 Query: 393 ggag 396 |||| Sbjct: 862 ggag 859
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full insert sequence Length = 1266 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 975 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 916 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 915 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 856 Query: 393 ggag 396 |||| Sbjct: 855 ggag 852
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full insert sequence Length = 1883 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 1559 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 1500 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 1499 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 1440 Query: 393 ggag 396 |||| Sbjct: 1439 ggag 1436
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full insert sequence Length = 1475 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 1163 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 1104 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 1103 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 1044 Query: 393 ggag 396 |||| Sbjct: 1043 ggag 1040
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full insert sequence Length = 1293 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 981 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 922 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 921 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 862 Query: 393 ggag 396 |||| Sbjct: 861 ggag 858
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 21353021 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 21352962 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 | |||| ||| || ||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 21352961 cgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcct 21352902 Query: 393 ggag 396 |||| Sbjct: 21352901 ggag 21352898 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 21322567 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 21322626 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 21322627 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 21322686 Query: 396 ggcggtg 402 ||||||| Sbjct: 21322687 ggcggtg 21322693 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 21340318 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 21340377 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 21340378 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 21340437 Query: 397 gcggtg 402 |||||| Sbjct: 21340438 gcggtg 21340443 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 20958556 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 20958515 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Plus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 21328469 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 21328528 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 21328529 gagggagaaggggccctggaggcggtg 21328555
>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence Length = 832 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||| | Sbjct: 303 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 244 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || ||||||||||||||||||||| |||||| ||||||||||||| ||| | Sbjct: 243 tgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgca 184 Query: 396 ggcggtg 402 |||||| Sbjct: 183 tgcggtg 177
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||| | Sbjct: 939 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 880 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || ||||||||||||||||||||| |||||| ||||||||||||| ||| | Sbjct: 879 tgttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgca 820 Query: 396 ggcggtg 402 |||||| Sbjct: 819 tgcggtg 813
>gb|AY111405.1| Zea mays CL5426_1 mRNA sequence Length = 528 Score = 119 bits (60), Expect = 7e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 |||||||| |||||| ||||| ||||| |||| ||||||||||||||||||||| || Sbjct: 263 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 322 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||||||||||||||||||| Sbjct: 323 ggccaccagcgtcttgccggactcgttggtgatgcg 358
>gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence Length = 1044 Score = 117 bits (59), Expect = 3e-23 Identities = 110/127 (86%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||| | Sbjct: 564 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 505 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || ||||||||| ||||||||||| |||||| ||||||||||||| ||| | Sbjct: 504 tgttggcgacgagcgtcttggcggactcgttgcggatgcggatggagaagggcggctgca 445 Query: 396 ggcggtg 402 |||||| Sbjct: 444 tgcggtg 438
>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds Length = 907 Score = 117 bits (59), Expect = 3e-23 Identities = 110/127 (86%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||| | Sbjct: 526 agctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgt 467 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 | ||| || ||||||||||||||||||||| |||||| ||||||||||||| ||| | Sbjct: 466 tcctggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgca 407 Query: 396 ggcggtg 402 |||||| Sbjct: 406 tgcggtg 400
>gb|AF332180.1|AF332180 Zea mays beta-expansin 7 (expB7) mRNA, complete cds Length = 1173 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 281 tactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcg 340 ||||||||||| || ||||| ||||| ||||| |||||||||| |||||||| | ||| Sbjct: 867 tactggacgatagaacggtagtaggtgttgggcacccagttggcggggatgacatggtca 808 Query: 341 gccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgc 390 |||||||||||||||||||||||||| || ||||||| |||||| ||||| Sbjct: 807 gccaccagcgtcttgccggactcgttcgtaatgcgcagggagaatggcgc 758
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6 (OSJNBb0014I11.3), mRNA Length = 1240 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 922 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 863 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 862 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 803 Query: 396 ggcggtg 402 ||||||| Sbjct: 802 ggcggtg 796
>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds Length = 1250 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 915 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 856 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 855 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 796 Query: 396 ggcggtg 402 ||||||| Sbjct: 795 ggcggtg 789
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 23056 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 22997 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 22996 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 22937 Query: 396 ggcggtg 402 ||||||| Sbjct: 22936 ggcggtg 22930 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 5305 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 5246 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 5245 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 5186 Query: 397 gcggtg 402 |||||| Sbjct: 5185 gcggtg 5180 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 17154 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 17095 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 17094 gagggagaaggggccctggaggcggtg 17068
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full insert sequence Length = 1257 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 816 Query: 396 ggcggtg 402 ||||||| Sbjct: 815 ggcggtg 809
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full insert sequence Length = 1257 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 816 Query: 396 ggcggtg 402 ||||||| Sbjct: 815 ggcggtg 809
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full insert sequence Length = 1263 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 941 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 882 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 881 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 822 Query: 396 ggcggtg 402 ||||||| Sbjct: 821 ggcggtg 815
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full insert sequence Length = 1259 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacct 335 ||||| ||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 336 tgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctgga 395 ||| ||| || |||||||||||||| ||| || |||||| | ||||||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctgga 816 Query: 396 ggcggtg 402 ||||||| Sbjct: 815 ggcggtg 809
>gb|AF332178.1|AF332178 Zea mays beta-expansin 5 (expB5) mRNA, partial cds Length = 650 Score = 99.6 bits (50), Expect = 7e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 |||||| | |||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 529 gtactgaatgatggagcggtagtaggtgttgggcgcccagttggcagggatgacccgagt 470 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 |||||||||| || |||||||||||||||||| ||||| |||||||||||||| Sbjct: 469 ggccaccagcttcctgccggactcgttggtgacgcgcagcgagaagggcgcctg 416
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||| ||||||||| |||| ||||| ||||||||||||||||| |||| || Sbjct: 884 actggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgatgttgttgg 825 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcggt 401 | || ||| ||||||||| ||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 824 cgacgagctgcttgccggagtcgctggtgatgcgcatggagaatggcgcctggagacggt 765 Query: 402 g 402 | Sbjct: 764 g 764
>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds Length = 1210 Score = 91.7 bits (46), Expect = 2e-15 Identities = 95/112 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 1026 actggacgatggagctgtaracggtgttgggctgccagtcggcggggatgacctgatcgg 967 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 966 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 915
>gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, complete cds Length = 1142 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 318 agttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgca 377 |||||||||||||||| || | |||||||||| | |||||||||||||||||||||||| Sbjct: 873 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 814 Query: 378 tggagaaggg 387 |||||||||| Sbjct: 813 tggagaaggg 804
>gb|AY104151.1| Zea mays PCO112411 mRNA sequence Length = 1171 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 318 agttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgca 377 |||||||||||||||| || | |||||||||| | |||||||||||||||||||||||| Sbjct: 882 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgca 823 Query: 378 tggagaaggg 387 |||||||||| Sbjct: 822 tggagaaggg 813
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full insert sequence Length = 1794 Score = 89.7 bits (45), Expect = 6e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 ||||| |||||||||||| |||| ||| || ||||||||||||||||||||| |||||| Sbjct: 938 ccagtaggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 879 Query: 376 catggagaagggcgcctggag 396 ||||||||||| |||||||| Sbjct: 878 gatggagaagggggcctggag 858
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 169311 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 157725 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcg 399 ||||||| |||||||||||| ||| | |||||| |||||||| |||||| | ||||| Sbjct: 157726 tgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggcg 157785 Query: 400 gtg 402 ||| Sbjct: 157786 gtg 157788
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 6489 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 6430 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 6429 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 6378
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 103422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 103363 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 103362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 103311 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 91666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 91725 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcg 399 ||||||| |||||||||||| ||| | |||||| |||||||| |||||| | ||||| Sbjct: 91726 tgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggcg 91785 Query: 400 gtg 402 ||| Sbjct: 91786 gtg 91788
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 169311 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 157725 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcg 399 ||||||| |||||||||||| ||| | |||||| |||||||| |||||| | ||||| Sbjct: 157726 tgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggcg 157785 Query: 400 gtg 402 ||| Sbjct: 157786 gtg 157788
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 93244 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 93303 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 93304 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 93355 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 105000 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 104941 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcg 399 ||||||| |||||||||||| ||| | |||||| |||||||| |||||| | ||||| Sbjct: 104940 tgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggcg 104881 Query: 400 gtg 402 ||| Sbjct: 104880 gtg 104878
>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full insert sequence Length = 1027 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 834 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 775 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctg 393 | | || |||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 774 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctg 723
>gb|AF332176.1|AF332176 Zea mays beta-expansin 3 (expB3) mRNA, partial cds Length = 788 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 282 actggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | | || |||| ||||| ||||| ||||||| ||| | Sbjct: 644 actggacgatggagctgtagacgttgtcgggctgccagtctgccggaatgacctggtccg 585 Query: 342 ccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggc 388 |||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 584 ccaccagcgtcttgccggactcgttggtgacgcgcagcgagaagggc 538
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3 (OSJNBb0014I11.1), mRNA Length = 904 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 898 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 839 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 838 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 779 Query: 397 gcggtg 402 |||||| Sbjct: 778 gcggtg 773
>gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete cds Length = 1319 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 897 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 838 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 837 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 778 Query: 397 gcggtg 402 |||||| Sbjct: 777 gcggtg 772
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full insert sequence Length = 1031 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 653 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 594 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 593 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 534 Query: 397 gcggtg 402 |||||| Sbjct: 533 gcggtg 528
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full insert sequence Length = 1313 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||| | || |||| |||||||||||||||||||||| Sbjct: 909 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 850 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggag 396 | ||| || ||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct: 849 gctggcgacgagctgcttgccggactcgttggtgatgcggagcgagaagggcgccgtgag 790 Query: 397 gcggtg 402 |||||| Sbjct: 789 gcggtg 784
>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds Length = 1078 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggag 382 ||||||||||| |||| |||||| |||||||| ||||| ||| ||||||| ||||||||| Sbjct: 794 gccgggatgacattgttggccacaagcgtcttcccggagtcgctggtgatacgcatggag 735 Query: 383 aagggcgcctg 393 |||||| |||| Sbjct: 734 aagggcccctg 724
>gb|AF261276.2| Oryza sativa beta-expansin (EXPB8) mRNA, partial cds Length = 933 Score = 69.9 bits (35), Expect = 6e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 807 gtactggacgaaggaacggtaaaaggtgttgggcgtccagttgagggggatgacgtcggg 748 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcg 399 ||||||| |||||||||||| ||| | |||||| |||||||| |||||| | ||||| Sbjct: 747 tgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggcg 688 Query: 400 gtg 402 ||| Sbjct: 687 gtg 685
>emb|AJ890019.1| Triticum aestivum mRNA for expansin EXPB11 protein precursor (expb11 gene), cultivar Wyuna, from endosperm tissue Length = 1032 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 326 gggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggagaag 385 |||||||||| ||||| || || |||||||||||||||||||||||||||| ||||| Sbjct: 773 gggatgacctgttcggcgacaagtgtcttgccggactcgttggtgatgcgcaacgagaat 714 Query: 386 ggcgcct 392 ||||||| Sbjct: 713 ggcgcct 707
>gb|DQ428284.1| Sorghum propinquum locus PRC0324 genomic sequence Length = 477 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428283.1| Sorghum bicolor voucher PI585454 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428282.1| Sorghum bicolor voucher PI267539 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428281.1| Sorghum bicolor voucher PI267408 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428280.1| Sorghum bicolor voucher PI221607 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428279.1| Sorghum bicolor voucher PI152702 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428278.1| Sorghum bicolor voucher NSL92371 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428277.1| Sorghum bicolor voucher NSL87902 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428276.1| Sorghum bicolor voucher NSL87666 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428275.1| Sorghum bicolor voucher NSL77217 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428274.1| Sorghum bicolor voucher NSL77034 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428273.1| Sorghum bicolor voucher NSL56174 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428272.1| Sorghum bicolor voucher NSL56003 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428271.1| Sorghum bicolor voucher NSL55243 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428270.1| Sorghum bicolor voucher NSL51365 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428269.1| Sorghum bicolor voucher NSL51030 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428268.1| Sorghum bicolor voucher NSL50875 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428267.1| Sorghum bicolor voucher BTx623 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|AY692478.1| Triticum aestivum beta-expansin EXPB6 mRNA, partial cds Length = 671 Score = 65.9 bits (33), Expect = 9e-08 Identities = 62/73 (84%) Strand = Plus / Minus Query: 315 cccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||| ||| |||||||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 327 cccagtcggcggggatgacctgttcggcggcgagcgtcttgccggactcgttggtkatgc 268 Query: 375 gcatggagaaggg 387 || |||||||| Sbjct: 267 scagcgagaaggg 255
>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds Length = 1034 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatgga 381 |||||||||||||| |||||| || |||| | |||||||||||| ||||| ||||| || Sbjct: 904 ggccgggatgacctggtcggcgacgagcgacctgccggactcgtcggtgacgcgcagcga 845 Query: 382 gaagggcgcctg 393 ||||||| |||| Sbjct: 844 gaagggcccctg 833
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full insert sequence Length = 1019 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtaaaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 889 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 830 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcg 399 ||||||| |||||||||||| ||| | |||||| |||||||| |||||| | ||||| Sbjct: 829 tgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggcg 770 Query: 400 gtg 402 ||| Sbjct: 769 gtg 767
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds Length = 898 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 810 ccagttggccgggatgacttgtttggccaccagcgtcttgccgga 766
>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds Length = 939 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggag 382 ||||||||| | |||| ||||||||||||||| |||| ||| |||||||||| |||| | Sbjct: 811 gccgggatggcattgttggccaccagcgtctttccggtatcgctggtgatgcggatggcg 752 Query: 383 aagggcgcctg 393 || ||| |||| Sbjct: 751 aatggcccctg 741
>gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog mRNA, complete cds Length = 1232 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggag 382 ||||||||| | |||| ||| ||||||||||| |||| ||| |||||||||| |||||| Sbjct: 816 gccgggatggcattgttggcgaccagcgtctttccggtatcgctggtgatgcggatggag 757 Query: 383 aagggcgcctg 393 || ||| |||| Sbjct: 756 aatggcccctg 746
>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds Length = 1132 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcgcatggag 382 ||||||||| | |||| ||||||||||||||| |||| ||| |||||||||| |||| | Sbjct: 786 gccgggatggcattgttggccaccagcgtctttccggtatcgctggtgatgcggatggcg 727 Query: 383 aagggcgcctg 393 || ||| |||| Sbjct: 726 aatggcccctg 716
>gb|AF220610.1| Oryza sativa pollen allergen mRNA, complete cds Length = 1106 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 769 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 728
>ref|NM_197637.1| Oryza sativa (japonica cultivar-group) beta-expansin (OSJNBa0082M15.4), mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 784 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 743
>gb|AF261277.1| Oryza sativa beta-expansin (EXPB9) mRNA, complete cds Length = 1117 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 784 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 743
>gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, complete cds Length = 1216 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 982 tcttgccggactcgctggtgacgcggatggagaagggggcct 941
>gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, complete cds Length = 1068 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 747 tcttgccggactcgctggtgacgcggatggagaagggggcct 706
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 117099 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 117140
>dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033P05, full insert sequence Length = 1071 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 800 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 759
>dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G12, full insert sequence Length = 1121 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaagggcgcct 392 |||||||||||||| |||||| ||| ||||||||||| |||| Sbjct: 800 tcttgccggactcggtggtgacgcgaatggagaagggtgcct 759
>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds Length = 1149 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| ||||||||||| Sbjct: 1061 tcttgccggactcgctggtgacgcggatggagaaggg 1025
>gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, complete cds Length = 1111 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| ||||||||||| Sbjct: 777 tcttgccggactcgctggtgacgcggatggagaaggg 741
>gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, partial cds Length = 496 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| ||||||||||| Sbjct: 237 tcttgccggactcgctggtgacgcggatggagaaggg 201
>gb|AY197353.1| Zea mays clone pJR9 beta-expansin 1 protein (EXPB1) mRNA, complete cds Length = 1066 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| ||||||||||| Sbjct: 764 tcttgccggactcgctggtgaggcggatggagaaggg 728
>gb|AF332174.1|AF332174 Zea mays beta-expansin 1 (expB1) mRNA, complete cds Length = 1080 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| ||||||||||| Sbjct: 764 tcttgccggactcgctggtgaggcggatggagaaggg 728
>gb|AY103636.1| Zea mays PCO124530 mRNA sequence Length = 1085 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| ||||||||||| Sbjct: 776 tcttgccggactcgctggtgaggcggatggagaaggg 740
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2 (OSJNBb0014I11.2), mRNA Length = 1262 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 813 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 754 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 753 gagggagaaggggccctggaggcggtg 727
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full insert sequence Length = 1043 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 812 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 753 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 752 gagggagaaggggccctggaggcggtg 726
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full insert sequence Length = 1259 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 810 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 751 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 750 gagggagaaggggccctggaggcggtg 724
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full insert sequence Length = 1026 Score = 46.1 bits (23), Expect = 0.087 Identities = 71/87 (81%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 803 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 744 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||||||||| ||||||||||||| Sbjct: 743 gagggagaaggggccctggaggcggtg 717
>dbj|AB041625.1| Brassica rapa BcSL10 gene for SLG-like 10, partial cds Length = 3511 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 catatgattccaaatgatgatg 261 |||||||||||||||||||||| Sbjct: 108 catatgattccaaatgatgatg 129
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccaccagcgtcttgccgg 359 ||||||||||||||||||||| Sbjct: 1260020 cggccaccagcgtcttgccgg 1260040
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 atgatgatgagttcagcagcttcag 277 ||||||||||||| ||||||||||| Sbjct: 345505 atgatgatgagttaagcagcttcag 345481
>gb|AY197352.1| Zea mays clone pJR11 beta-expansin 9 protein (EXPB9) mRNA, complete cds Length = 1088 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| || |||||||| Sbjct: 738 tcttgccggactcgctggtgaggcggatagagaaggg 702
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccaccagcgtcttgccgg 359 ||||||||||||||||||||| Sbjct: 226686 cggccaccagcgtcttgccgg 226706
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccaccagcgtcttgccgg 359 ||||||||||||||||||||| Sbjct: 274844 cggccaccagcgtcttgccgg 274864
>gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complete sequence Length = 194374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 tgattccaaatgatgatgagt 264 ||||||||||||||||||||| Sbjct: 177950 tgattccaaatgatgatgagt 177930
>gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, complete cds Length = 999 Score = 42.1 bits (21), Expect = 1.4 Identities = 70/87 (80%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgcg 375 |||||||||||||||||||| || ||| | | |||| |||||||||| || ||||| Sbjct: 813 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 754 Query: 376 catggagaagggcgcctggaggcggtg 402 | ||| ||||| ||||||||||||| Sbjct: 753 gagggakaaggggccctggaggcggtg 727
>gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, complete cds Length = 960 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 ||||||||| |||| |||||| ||| ||||||||||| Sbjct: 730 tcttgccgggctcgctggtgacgcggatggagaaggg 694
>gb|L14271.1|MZEPOLPI Zea mays Zea mI gene, complete cds Length = 827 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 351 tcttgccggactcgttggtgatgcgcatggagaaggg 387 |||||||||||||| |||||| ||| || |||||||| Sbjct: 499 tcttgccggactcgctggtgaggcggatagagaaggg 463
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ggccaccagcgtcttgccgg 359 |||||||||||||||||||| Sbjct: 2016483 ggccaccagcgtcttgccgg 2016464
>gb|AY172516.1| Rhizobium etli transcription repair coupling factor (mfd) gene, partial cds; recombination and repair protein (recG) gene, complete cds; and unknown gene Length = 6176 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gccaccagcgtcttgccgga 360 |||||||||||||||||||| Sbjct: 4669 gccaccagcgtcttgccgga 4650
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gccaccagcgtcttgccgga 360 |||||||||||||||||||| Sbjct: 2190610 gccaccagcgtcttgccgga 2190629
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 aaggtgctgggcgcccagttggcc 325 |||||||||| ||||||||||||| Sbjct: 2061004 aaggtgctggtcgcccagttggcc 2060981
>gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, complete sequence Length = 177317 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 gcacacacaaacagtaataa 22 |||||||||||||||||||| Sbjct: 120092 gcacacacaaacagtaataa 120073
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gtcggccaccagcgtcttgc 356 |||||||||||||||||||| Sbjct: 4141074 gtcggccaccagcgtcttgc 4141055
>emb|BX649380.7| Zebrafish DNA sequence from clone CH211-87P6 in linkage group 4, complete sequence Length = 172167 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 catatgattccaaatgatgatgagttca 267 |||||||||| ||||| ||||||||||| Sbjct: 166340 catatgattctaaatggtgatgagttca 166367
>gb|AY112069.1| Zea mays CL35761_1 mRNA sequence Length = 631 Score = 40.1 bits (20), Expect = 5.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 347 agcgtcttgccggactcgttggtgatgcgcatggagaagggcgcctggaggcggtg 402 |||||||||||||| ||| || | |||| ||||||||||| | ||| |||||||| Sbjct: 167 agcgtcttgccggagtcggtgcgggtgcggatggagaagggtggctgcaggcggtg 222
>gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, complete sequence Length = 182865 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gcacacacaaacagtaataa 22 |||||||||||||||||||| Sbjct: 7061 gcacacacaaacagtaataa 7080
>gb|AF107020.1|AF107020 Actinomyces naeslundii strain LY7 type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AF107019.1|AF107019 Actinomyces naeslundii strain P-1-K type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AF106035.1|AF106035 Actinomyces naeslundii strain B-1-K type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgggcgcccagttggccgggat 330 ||||||||||||||| |||||||| Sbjct: 594398 gctgggcgcccagtttgccgggat 594375
>gb|M32067.1|ACYFIMBA A.viscosus fimbrial structural protein type 1 subunit gene, complete cds Length = 1850 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 588 ggccgggatgaccttgtcgg 569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,325,864 Number of Sequences: 3902068 Number of extensions: 3325864 Number of successful extensions: 61867 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61320 Number of HSP's gapped (non-prelim): 505 length of query: 402 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 380 effective length of database: 17,147,199,772 effective search space: 6515935913360 effective search space used: 6515935913360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)