>ref|XM_469515.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 972

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 303 ctcacacgaagccgacctcggcgaactg 330
           ||||||||||||||||||||||||||||
Sbjct: 496 ctcacacgaagccgacctcggcgaactg 469



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 203 gaattaaaacaacacgaacggagaaa 228
           |||||| |||||||||||||||||||
Sbjct: 613 gaattagaacaacacgaacggagaaa 588

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 303      ctcacacgaagccgacctcggcgaactg 330
                ||||||||||||||||||||||||||||
Sbjct: 28446665 ctcacacgaagccgacctcggcgaactg 28446692



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 203      gaattaaaacaacacgaacggagaaa 228
                |||||| |||||||||||||||||||
Sbjct: 28446548 gaattagaacaacacgaacggagaaa 28446573

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 303      ctcacacgaagccgacctcggcgaactg 330
                ||||||||||||||||||||||||||||
Sbjct: 28537989 ctcacacgaagccgacctcggcgaactg 28538016



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 203      gaattaaaacaacacgaacggagaaa 228
                |||||| |||||||||||||||||||
Sbjct: 28537872 gaattagaacaacacgaacggagaaa 28537897

>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 303   ctcacacgaagccgacctcggcgaactg 330
             ||||||||||||||||||||||||||||
Sbjct: 40795 ctcacacgaagccgacctcggcgaactg 40822



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 203   gaattaaaacaacacgaacggagaaa 228
             |||||| |||||||||||||||||||
Sbjct: 40678 gaattagaacaacacgaacggagaaa 40703

>emb|X88799.1|OSRNAATH2 O.sativa mRNA for AT hook-containing protein (850 bp)
          Length = 850

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 303 ctcacacgaagccgacctcggcgaactg 330
           ||||||||||||||||||||||||||||
Sbjct: 342 ctcacacgaagccgacctcggcgaactg 315



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 203 gaattaaaacaacacgaacggagaaa 228
           |||||| |||||||||||||||||||
Sbjct: 459 gaattagaacaacacgaacggagaaa 434

>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 1/4
          Length = 347558

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 195    tccaccacgaattaaaacaacac 217
              |||||||||||||||||||||||
Sbjct: 181500 tccaccacgaattaaaacaacac 181478

>gb|AC134406.14| Mus musculus chromosome 9, clone RP24-349J23, complete sequence
          Length = 192663

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   gacacaccacccacactcact 153
             |||||||||||||||||||||
Sbjct: 25644 gacacaccacccacactcact 25664

>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   ccaccacgaattaaaacaaca 216
             |||||||||||||||||||||
Sbjct: 51125 ccaccacgaattaaaacaaca 51145

>gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete sequence
          Length = 237678

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   gacacaccacccacactcact 153
             |||||||||||||||||||||
Sbjct: 52501 gacacaccacccacactcact 52481

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 122      caccacggactgacacaccac 142
                |||||||||||||||||||||
Sbjct: 42724423 caccacggactgacacaccac 42724443

>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   caccacggactgacacaccac 142
             |||||||||||||||||||||
Sbjct: 57188 caccacggactgacacaccac 57208

>emb|BX247899.17| Zebrafish DNA sequence from clone CH211-229B6 in linkage group 19,
             complete sequence
          Length = 150160

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    gaaatacagagggatacacc 72
             ||||||||||||||||||||
Sbjct: 18009 gaaatacagagggatacacc 17990

>gb|AC125270.7| Mus musculus chromosome 5, clone RP24-150L20, complete sequence
          Length = 174834

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   ccacccacactcactcaccg 158
             ||||||||||||||||||||
Sbjct: 90409 ccacccacactcactcaccg 90390

>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    ccaccacgaattaaaacaac 215
              ||||||||||||||||||||
Sbjct: 379345 ccaccacgaattaaaacaac 379326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,164,354
Number of Sequences: 3902068
Number of extensions: 2164354
Number of successful extensions: 35806
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35749
Number of HSP's gapped (non-prelim): 57
length of query: 330
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 308
effective length of database: 17,147,199,772
effective search space: 5281337529776
effective search space used: 5281337529776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)