Clone Name | rbart22d12 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_777505.1| PREDICTED: Strongylocentrotus purpuratus similar to BAP28 protein (LOC577264), mRNA Length = 2553 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agcagcatccatgaactgaacgatg 262 ||||||| ||||||||||||||||| Sbjct: 2286 agcagcaaccatgaactgaacgatg 2262
>gb|AC146039.2| Pan troglodytes BAC clone RP43-97H7 from 7, complete sequence Length = 144149 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aactatgaatgtaccatata 99 |||||||||||||||||||| Sbjct: 34844 aactatgaatgtaccatata 34825
>gb|AC004981.2| Homo sapiens PAC clone RP5-1159C10 from 7, complete sequence Length = 149687 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aactatgaatgtaccatata 99 |||||||||||||||||||| Sbjct: 124426 aactatgaatgtaccatata 124445
>gb|AC093230.2| Homo sapiens chromosome 19 clone LLNLF-130H12, complete sequence Length = 46127 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccatataccctccaacaatt 112 |||||||||||||||||||| Sbjct: 9381 ccatataccctccaacaatt 9400
>gb|AC008500.7| Homo sapiens chromosome 5 clone CTC-439D5, complete sequence Length = 264095 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 caaagaaaacaatgggtcca 42 |||||||||||||||||||| Sbjct: 110806 caaagaaaacaatgggtcca 110787
>gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete sequence Length = 114637 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 gccaaagtacatatactgca 24 |||||||||||||||||||| Sbjct: 109436 gccaaagtacatatactgca 109417
>gb|AC026029.8| Homo sapiens BAC clone RP11-16G16 from 4, complete sequence Length = 173067 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 caccaacacaaatctgaattctga 223 ||||||||||||||||||| |||| Sbjct: 76831 caccaacacaaatctgaatactga 76854
>gb|AC092311.3| Homo sapiens chromosome 19 clone LLNLR-278C11, complete sequence Length = 27896 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccatataccctccaacaatt 112 |||||||||||||||||||| Sbjct: 15406 ccatataccctccaacaatt 15387
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 agtacatatactgcaaagaa 29 |||||||||||||||||||| Sbjct: 416464 agtacatatactgcaaagaa 416483
>gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, complete sequence Length = 163565 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctgcaaagaaaacaatgggt 39 |||||||||||||||||||| Sbjct: 57458 ctgcaaagaaaacaatgggt 57439
>gb|AC138365.16| Mus musculus chromosome 5, clone RP23-262B5, complete sequence Length = 172631 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctgcaaagaaaacaatgggt 39 |||||||||||||||||||| Sbjct: 70984 ctgcaaagaaaacaatgggt 71003
>emb|AL824705.5| Mouse DNA sequence from clone RP23-102G9 on chromosome 4, complete sequence Length = 144458 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 acacaaatctgaattctgaa 224 |||||||||||||||||||| Sbjct: 8463 acacaaatctgaattctgaa 8444 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,600,246 Number of Sequences: 3902068 Number of extensions: 2600246 Number of successful extensions: 51243 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51223 Number of HSP's gapped (non-prelim): 20 length of query: 297 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 275 effective length of database: 17,147,199,772 effective search space: 4715479937300 effective search space used: 4715479937300 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)