>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP)
          Length = 2492

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +1

Query: 70   RKTRPKTIELKR----KERKKNNHRCNTNKPPPQITTSVRNDIEQGLQRRLQEG 219
            +K + +T   K+    KE+K+N+ R +T +    IT+S  +DIE   Q  + EG
Sbjct: 1166 KKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEG 1219

>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP) (Znf-HX)
          Length = 2492

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +1

Query: 70   RKTRPKTIELKR----KERKKNNHRCNTNKPPPQITTSVRNDIEQGLQRRLQEG 219
            +K + +T   K+    KE+K+N+ R +T +    IT+S  +DIE   Q  + EG
Sbjct: 1166 KKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEG 1219

>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP)
          Length = 2492

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 70   RKTRPKTIELKRKERKKNNHRCNTNKPPPQITTSVRNDIEQGLQRRLQEG 219
            ++T  K   +  KE+K+N+ R +T +    IT+S  +DIE   Q  + EG
Sbjct: 1170 QRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEG 1219

>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B|
          Length = 160

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 7   HNRCSADFIKREKKYRMARFMRKTRPKTIELKRK 108
           H++C  DF+ R K     R   K + KT++L+R+
Sbjct: 98  HSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQ 131

>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A|
          Length = 160

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 7   HNRCSADFIKREKKYRMARFMRKTRPKTIELKRK 108
           H++C  DF+ R K     R   K + KT++L+R+
Sbjct: 98  HSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQ 131

>EEA1_MOUSE (Q8BL66) Early endosome antigen 1|
          Length = 1411

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = +1

Query: 31   IKREKKYRMARFMRKTRPKTIELKRKERKKNNHRCNTNKPPPQITTSVRN-----DIEQG 195
            +K+E++ R   F  K      E+K KE     H  N  K   Q+TT   N        Q 
Sbjct: 1200 VKKEEEKRKEEFSEKEAKLHSEIKEKEAGMKKHEENEAKLTMQVTTLNENLGTVKKEWQS 1259

Query: 196  LQRRLQE 216
             QRR+ E
Sbjct: 1260 SQRRVSE 1266

>LBR_MOUSE (Q3U9G9) Lamin-B receptor (Integral nuclear envelope inner membrane|
           protein)
          Length = 626

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +1

Query: 31  IKREKKYRMARFMRKTRPKTIELKRKERKKNNHRCNTNKPPP----QITTSVRNDIEQG 195
           +  E +Y + ++    RP+  E+K KE +       T  P P    Q+TT  R D+E G
Sbjct: 165 LSTEDRYIVTQY--SLRPRREEVKAKEIESEEQNLVTKGPAPLGTFQVTTPQRKDLEFG 221

>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 34  KREKKYRMARFMRKTRPKTIELKRKERKKNNHRCNTNKPPPQITTSVRNDIE 189
           K EK YR +R  +K + +  + K K RK+  H+ N+         S+ +D+E
Sbjct: 41  KNEKAYRKSR--KKHKKEREKKKSKRRKREKHKHNSPSSDDSSDYSLDSDVE 90

>RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24|
          Length = 131

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 19  SADFIKR-EKKYRMARFMRKTRPKTIELKRKERKKNNHRCNTNK 147
           S D+ K+ E KYR+AR     + KT   +RKERK    +    K
Sbjct: 78  SLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRGTK 121

>FPPS_SCHPO (O14230) Probable farnesyl pyrophosphate synthetase (FPP|
           synthetase) (FPS) (Farnesyl diphosphate synthetase)
           [Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 347

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 256 MPKTTTVSIDDAFLLEGVFEDLAQYHFGQRL*FVEVV 146
           MP    ++I+DAF++E     L + HF Q   +V+++
Sbjct: 113 MPGVGNIAINDAFMVESAIYFLLKKHFRQESCYVDLI 149

>ANN1_AREMA (Q5SC60) Arenicin-1 precursor|
          Length = 202

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 327 DHSQGLVEWSCTDLGESFVIDG 262
           DH++GL+ WS    GE ++I G
Sbjct: 84  DHAKGLISWSIPRAGECYLIGG 105


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,038,814
Number of Sequences: 219361
Number of extensions: 989531
Number of successful extensions: 3303
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3300
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)