Clone Name | rbart22c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SSPN_MOUSE (Q62147) Sarcospan (K-ras oncogene-associated protein... | 30 | 2.3 | 2 | LEU1_SALTY (P15875) 2-isopropylmalate synthase (EC 2.3.3.13) (Al... | 29 | 5.1 | 3 | LEU1_SALTI (Q8Z9I0) 2-isopropylmalate synthase (EC 2.3.3.13) (Al... | 29 | 5.1 | 4 | ASSY_BUCAP (Q8KA60) Argininosuccinate synthase (EC 6.3.4.5) (Cit... | 28 | 6.7 |
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>SSPN_MOUSE (Q62147) Sarcospan (K-ras oncogene-associated protein)| (Kirsten-Ras-associated protein) Length = 216 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -1 Query: 214 LLLVCMICLMGPQQIVVFDVRNYVLLSSAIRPVICMRTVKFAC---TLTCQFWCSRS 53 L ++C+ + + V F ++ + L SA+ ++CM V FA +L QF C S Sbjct: 75 LFMLCVSYQVDERTCVQFSMKVFYFLLSALGLMVCMLAVAFAAHHYSLLAQFTCETS 131
>LEU1_SALTY (P15875) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 28.9 bits (63), Expect = 5.1 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 146 VVTYIEHHNLLRTHQADHTYEQQLITARTSVVGTGVDRHQHGL 274 V T I HH + RT Q I A ++VG+G H G+ Sbjct: 256 VHTNINHHEIWRTSQTVSQICNMPIPANKAIVGSGAFAHSSGI 298
>LEU1_SALTI (Q8Z9I0) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 28.9 bits (63), Expect = 5.1 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 146 VVTYIEHHNLLRTHQADHTYEQQLITARTSVVGTGVDRHQHGL 274 V T I HH + RT Q I A ++VG+G H G+ Sbjct: 256 VHTNINHHEIWRTSQTVSQICNMPIPANKAIVGSGAFAHSSGI 298
>ASSY_BUCAP (Q8KA60) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 401 Score = 28.5 bits (62), Expect = 6.7 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -1 Query: 151 NYVLLSSAIRPVICMRTVKFACTLTCQFWC 62 NY+L ++ RP+I + V+FA ++ +F C Sbjct: 88 NYLLGTAIARPIIAKKQVEFASSIGAKFLC 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,024,585 Number of Sequences: 219361 Number of extensions: 752826 Number of successful extensions: 1710 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1692 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1710 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)