>PURL_AQUAE (O67691) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 745

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -3

Query: 228 EPI*ISPTISY*EQDRPPV*FQFVSCLSMSGERAEVVGLPVV 103
           +P+ I+  +++   +RP + +QFV  +    E  E +G+PVV
Sbjct: 488 KPLAITDCLNFGNPERPEIMWQFVKAVEGMAEACEELGIPVV 529

>PURL_BRAJA (Q89IC0) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 736

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 228 EPI*ISPTISY*EQDRPPV*FQFVSCLSMSGERAEVVGLPVV 103
           +P+ I+  +++   +RP +  QFV CL    E    +  PVV
Sbjct: 486 KPLAITDNLNFGNPERPEIMGQFVGCLKGISEACRTLDFPVV 527

>SYH_PSEU2 (Q4ZX22) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 429

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 211 RNLDRFLCTYGERMADGIFIFSTKTARMLALLRLRCNSHLSSF 339
           R +D +LC +GE         + K    L  LRL+ N+   SF
Sbjct: 329 RQVDVYLCAFGEAAELAALALTEKVRDQLPTLRLQVNAGAGSF 371

>SYN_BACTN (Q8A0Z8) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 467

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 66  FRVEHQRTISMQLFFHEKNF 7
           FR+ H   I++  FFHEK F
Sbjct: 136 FRIRHNMAIAIHKFFHEKGF 155

>SYN_BACFR (Q64P24) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 467

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 66  FRVEHQRTISMQLFFHEKNF 7
           FR+ H   I++  FFHEK F
Sbjct: 136 FRIRHNMAIAIHKFFHEKGF 155

>YCX6_PORPU (P51216) Hypothetical 14.2 kDa protein in apcF-rps4 intergenic|
           region (ORF121)
          Length = 121

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +1

Query: 103 NNRQANNFSPLTAHRQTAYKLELDGRPILFLV*N---GWRNLDRFLCTYGERMADGIFIF 273
           NN+Q      ++   Q +YKL LD +    +  N      N+++F C   +     IF F
Sbjct: 14  NNKQKQYLKDISILNQISYKLSLDSKSYFVITINILDQVINVEQF-CFNSKGQLYSIF-F 71

Query: 274 STKTARMLALLRLRCNSHLSSFLYN 348
             KTA++L    L  N H++  L N
Sbjct: 72  KGKTAKLLCHTILNSN-HINILLSN 95

>ZN189_HUMAN (O75820) Zinc finger protein 189|
          Length = 626

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 8   KFFSWKNNCIEIVR*CSTRKPNHKNKC 88
           K FSWK++ IE  R  +  KP H  KC
Sbjct: 267 KAFSWKSHLIEHQRTHTGEKPYHCTKC 293

>SYH_PSE14 (Q48LZ3) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 429

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 211 RNLDRFLCTYGERMADGIFIFSTKTARMLALLRLRCNSHLSSF 339
           R +D +LC +GE         + K    L  LRL+ N+   SF
Sbjct: 329 RQVDVYLCAFGEAAELAALALTEKVRDQLPSLRLQVNAGAGSF 371

>SYH_PSEF5 (Q4K6V0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 429

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 211 RNLDRFLCTYGERMADGIFIFSTKTARMLALLRLRCNSHLSSF 339
           R +D +LC +GE         S +    L  LRL+ N+   SF
Sbjct: 329 RQVDVYLCAFGEAAELAALALSERVRDQLPNLRLQINAGAGSF 371

>PURL_METAC (Q8TIT6) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 715

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -3

Query: 255 SHSFAVRT*EPI*ISPTISY*EQDRPPV*FQFVSCLSMSGERAEVVGLPVV 103
           S + AV+  EP+ I   +++   +RP   +QF + +   G+ A  + +PVV
Sbjct: 460 SMNLAVKGAEPLAIVNCLNFGNPERPETYWQFENAVLGLGDEARKLSIPVV 510


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,156,566
Number of Sequences: 219361
Number of extensions: 937107
Number of successful extensions: 2205
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2204
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)