ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart22c06 |
|---|---|
| Clone Library Name | barley_pub |
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 108 bits (269), Expect = 1e-23 Identities = 50/76 (65%), Positives = 64/76 (84%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W + SRL Q+FSEHG+VV+A +V DRETGRSRGFGFVTM+S+ +++ AI+ALDGQ +DG Sbjct: 158 WDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDG 217 Query: 337 RPLRVNVAAERPQRGF 290 R +RVNVA ERP+R F Sbjct: 218 RAVRVNVAEERPRRAF 233 Score = 69.7 bits (169), Expect = 4e-12 Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + +L +F G V A ++Y+RET RSRGFGFVTM++ E+ + A+ L+G +MDG Sbjct: 64 YDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDG 123 Query: 337 RPLRVNVAAER--PQR 296 R L VN AA R P+R Sbjct: 124 RQLTVNKAAPRGSPER 139
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 107 bits (266), Expect = 3e-23 Identities = 49/74 (66%), Positives = 61/74 (82%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W ++ RL Q+FSEHG+VV A +VYDRETGRSRGFGFVTM+ ++L+ AISALDGQ ++G Sbjct: 253 WDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEG 312 Query: 337 RPLRVNVAAERPQR 296 R +RVNVA ERP R Sbjct: 313 RAIRVNVAEERPPR 326 Score = 61.6 bits (148), Expect = 1e-09 Identities = 29/74 (39%), Positives = 46/74 (62%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + L +F + G V A ++Y+RET +SRGFGFVTM+S ++ ++A+ + +++G Sbjct: 159 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 218 Query: 337 RPLRVNVAAERPQR 296 R L VN AA R R Sbjct: 219 RLLTVNKAAPRGSR 232
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 104 bits (260), Expect = 1e-22 Identities = 48/74 (64%), Positives = 62/74 (83%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D+RL Q+FSEHG+VV+A +VYDRETGRSRGFGFVTMAS+ ++ AI+ LDGQ +DG Sbjct: 239 WGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDG 298 Query: 337 RPLRVNVAAERPQR 296 R +RVNVA +R +R Sbjct: 299 RTIRVNVAEDRSRR 312 Score = 60.8 bits (146), Expect = 2e-09 Identities = 28/74 (37%), Positives = 48/74 (64%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L ++F + G V A ++Y+R+T +SRGFGFVTM++ E+ + A+ + +++G Sbjct: 145 YDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNG 204 Query: 337 RPLRVNVAAERPQR 296 R L VN AA R +R Sbjct: 205 RLLTVNKAARRGER 218
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 103 bits (256), Expect = 4e-22 Identities = 46/74 (62%), Positives = 62/74 (83%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D+RL Q+FSEHG+VV+A +V+DRE+GRSRGFGFVTM+S+ ++ AI+ LDGQ +DG Sbjct: 200 WDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDG 259 Query: 337 RPLRVNVAAERPQR 296 R +RVN A ERP+R Sbjct: 260 RTIRVNAAEERPRR 273 Score = 65.1 bits (157), Expect = 1e-10 Identities = 32/74 (43%), Positives = 46/74 (62%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L Q+F + G V A ++Y+RET RSRGFGFVTM++ E+ D A+ +++G Sbjct: 106 YDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNG 165 Query: 337 RPLRVNVAAERPQR 296 R L VN AA R R Sbjct: 166 RLLTVNKAAPRGSR 179
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 90.5 bits (223), Expect = 2e-18 Identities = 40/76 (52%), Positives = 59/76 (77%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L ++FSE G VV+A +VYDR++GRSRGFGFVT +S ++++ AI +L+G ++DG Sbjct: 216 WGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDG 275 Query: 337 RPLRVNVAAERPQRGF 290 R +RV+ A ERP+R F Sbjct: 276 RSIRVSAAEERPRRQF 291 Score = 67.0 bits (162), Expect = 3e-11 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + + L +F G V ++YD+ TGRSRGFGFVTM++KE++++A +G E+DG Sbjct: 96 FSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDG 155 Query: 337 RPLRVNVA---AERPQRGF*CGAAAES 266 R +RVN A+R F G S Sbjct: 156 RAIRVNAGPAPAKRENSSFGGGRGGNS 182
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 89.7 bits (221), Expect = 4e-18 Identities = 40/76 (52%), Positives = 59/76 (77%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L ++FSE G VV+A +VYDR++GRSRGFGFVT +S ++++ AI +L+G ++DG Sbjct: 217 WGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDG 276 Query: 337 RPLRVNVAAERPQRGF 290 R +RV+ A ERP+R F Sbjct: 277 RSIRVSAAEERPRRQF 292 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 3/87 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + + L +F G V ++YD+ +GRSRGFGFVTM++KE++++A +G E+DG Sbjct: 97 FSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDG 156 Query: 337 RPLRVNVA---AERPQRGF*CGAAAES 266 R +RVN A+R F G S Sbjct: 157 RAIRVNAGPAPAKRENSSFGGGRGGNS 183
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 86.3 bits (212), Expect = 5e-17 Identities = 36/75 (48%), Positives = 57/75 (76%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L +F+E G+VV A ++YDR++GRS+GFGFVT++S +++ AI++L+G ++DG Sbjct: 266 WGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDG 325 Query: 337 RPLRVNVAAERPQRG 293 R +RV+ A RP RG Sbjct: 326 RQIRVSEAEARPPRG 340 Score = 71.6 bits (174), Expect = 1e-12 Identities = 31/74 (41%), Positives = 48/74 (64%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + ++L Q+F G V ++YD+ TGRSRGFGFVTM++ ++++A +G E +G Sbjct: 108 FNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEG 167 Query: 337 RPLRVNVAAERPQR 296 RPLRVN P+R Sbjct: 168 RPLRVNAGPPPPKR 181
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 84.7 bits (208), Expect = 1e-16 Identities = 37/74 (50%), Positives = 54/74 (72%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L +FSE G+VV A ++YDR++GRS+GFGFVT S +++ +AI +LDG ++DG Sbjct: 213 WGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDG 272 Query: 337 RPLRVNVAAERPQR 296 R +RV+ A RP R Sbjct: 273 RQIRVSEAEARPPR 286 Score = 74.7 bits (182), Expect = 1e-13 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + ++L Q+F G V ++YD+ TGRSRGFGFVTM+S ++++A +G E+DG Sbjct: 100 FNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDG 159 Query: 337 RPLRVNVAAERPQR 296 RPLRVN P+R Sbjct: 160 RPLRVNAGPPPPKR 173
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 84.3 bits (207), Expect = 2e-16 Identities = 38/74 (51%), Positives = 56/74 (75%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W + L +FSE G+VV+A +VYDR++GRSRGFGFVT +S E++++AI +LDG +++G Sbjct: 197 WGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNG 256 Query: 337 RPLRVNVAAERPQR 296 R +RV+ A RP R Sbjct: 257 RAIRVSPAEARPPR 270 Score = 72.4 bits (176), Expect = 7e-13 Identities = 32/66 (48%), Positives = 47/66 (71%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A+ + L ++F G V ++YD+ TGRSRGFGFVTM+SKE++++A +G E+DG Sbjct: 96 FSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDG 155 Query: 337 RPLRVN 320 R LRVN Sbjct: 156 RALRVN 161
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 84.3 bits (207), Expect = 2e-16 Identities = 38/74 (51%), Positives = 56/74 (75%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W + L +FSE G+VV+A +VYDR++GRSRGFGFVT +S E++++AI +LDG +++G Sbjct: 203 WGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNG 262 Query: 337 RPLRVNVAAERPQR 296 R +RV+ A RP R Sbjct: 263 RAIRVSPAEARPPR 276 Score = 72.4 bits (176), Expect = 7e-13 Identities = 32/66 (48%), Positives = 47/66 (71%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A+ + L ++F G V ++YD+ TGRSRGFGFVTM+SKE++++A +G E+DG Sbjct: 96 FSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDG 155 Query: 337 RPLRVN 320 R LRVN Sbjct: 156 RALRVN 161
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 77.4 bits (189), Expect = 2e-14 Identities = 35/75 (46%), Positives = 50/75 (66%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L FS++GEV+++ I+ DRETGRSRGFGFVT ++ + AI ++GQ++DG Sbjct: 17 WATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDG 76 Query: 337 RPLRVNVAAERPQRG 293 R + VN A R G Sbjct: 77 RSITVNEAQSRGSGG 91
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 76.6 bits (187), Expect = 4e-14 Identities = 35/75 (46%), Positives = 48/75 (64%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W D L Q FS+ G++ ++ I+ DRETGRSRGFGFVT ++ + AI ++GQE+DG Sbjct: 15 WATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDG 74 Query: 337 RPLRVNVAAERPQRG 293 R + VN A R G Sbjct: 75 RNITVNEAQSRGSGG 89
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 75.9 bits (185), Expect = 6e-14 Identities = 35/72 (48%), Positives = 50/72 (69%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D+ L F+ G+VV+A ++ DRETGRSRGFGFV + +AIS +DG+E++G Sbjct: 44 WGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNG 103 Query: 337 RPLRVNVAAERP 302 R +RVN A +RP Sbjct: 104 RHIRVNPANDRP 115
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 75.9 bits (185), Expect = 6e-14 Identities = 34/71 (47%), Positives = 49/71 (69%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W D+ L + FS+ GEV+++ I+ DRETGRSRGFGFVT ++ + AI ++G+E+DG Sbjct: 15 WATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDG 74 Query: 337 RPLRVNVAAER 305 R + VN A R Sbjct: 75 RTITVNEAQSR 85
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 75.1 bits (183), Expect = 1e-13 Identities = 33/75 (44%), Positives = 50/75 (66%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L F+++G+V+++ I+ DRETGRSRGFGFVT ++ + AI ++GQ++DG Sbjct: 17 WATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDG 76 Query: 337 RPLRVNVAAERPQRG 293 R + VN A R G Sbjct: 77 RSITVNEAQSRGSGG 91
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 73.9 bits (180), Expect = 2e-13 Identities = 33/71 (46%), Positives = 48/71 (67%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W ++ L FS+ GE+V++ I+ DRETGRSRGFGFVT ++ + AI ++GQ++DG Sbjct: 17 WATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDG 76 Query: 337 RPLRVNVAAER 305 R + VN A R Sbjct: 77 RSITVNEAQSR 87
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 72.8 bits (177), Expect = 5e-13 Identities = 32/71 (45%), Positives = 49/71 (69%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W + L Q F+ G+V+++ ++ DRETGRSRGFGFVT +S++ + AI ++G+E+DG Sbjct: 17 WATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDG 76 Query: 337 RPLRVNVAAER 305 R + VN A R Sbjct: 77 RNITVNQAQSR 87
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 72.0 bits (175), Expect = 9e-13 Identities = 33/75 (44%), Positives = 49/75 (65%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W D L + FS+ G+V+++ I+ DRE+GRSRGFGFVT ++ + AI ++G+E+DG Sbjct: 15 WATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDG 74 Query: 337 RPLRVNVAAERPQRG 293 R + VN A R G Sbjct: 75 RVITVNEAQSRGSGG 89
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 71.2 bits (173), Expect = 2e-12 Identities = 31/71 (43%), Positives = 48/71 (67%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W + L F+ +GE++++ ++ DRETGRSRGFGFVT +S+ + AI ++G+E+DG Sbjct: 17 WATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDG 76 Query: 337 RPLRVNVAAER 305 R + VN A R Sbjct: 77 RNITVNQAQSR 87
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 71.2 bits (173), Expect = 2e-12 Identities = 34/64 (53%), Positives = 47/64 (73%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 FS +GEV+ + I+ DRET RSRGFGFVT +++E + SAI ++G+E+DGR + VN A R Sbjct: 7 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSR 66 Query: 304 PQRG 293 RG Sbjct: 67 GGRG 70
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 68.6 bits (166), Expect = 1e-11 Identities = 29/71 (40%), Positives = 48/71 (67%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W L F++ ++A ++YDR +GRSRGFGF+T +S E ++SA+ ++ E++G Sbjct: 226 WALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEG 285 Query: 337 RPLRVNVAAER 305 RPLR+NVA ++ Sbjct: 286 RPLRLNVAGQK 296 Score = 65.5 bits (158), Expect = 8e-11 Identities = 32/61 (52%), Positives = 41/61 (67%) Frame = -1 Query: 502 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 S+L ++F+E G V N IVYDR T RSRGF FVTM S E+ AI DG ++ GR ++V Sbjct: 128 SQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKV 187 Query: 322 N 320 N Sbjct: 188 N 188
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 66.2 bits (160), Expect = 5e-11 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A++G+ +DG Sbjct: 15 FDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74 Query: 337 RPLRVNVA---AERPQRGF*CGAA 275 R +RV+ A ++ RG+ G+A Sbjct: 75 RQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 66.2 bits (160), Expect = 5e-11 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A++G+ +DG Sbjct: 15 FDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74 Query: 337 RPLRVNVA---AERPQRGF*CGAA 275 R +RV+ A ++ RG+ G+A Sbjct: 75 RQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 66.2 bits (160), Expect = 5e-11 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A++G+ +DG Sbjct: 15 FDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74 Query: 337 RPLRVNVA---AERPQRGF*CGAA 275 R +RV+ A ++ RG+ G+A Sbjct: 75 RQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 66.2 bits (160), Expect = 5e-11 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A++G+ +DG Sbjct: 15 FDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74 Query: 337 RPLRVNVA---AERPQRGF*CGAA 275 R +RV+ A ++ RG+ G+A Sbjct: 75 RQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 66.2 bits (160), Expect = 5e-11 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A++G+ +DG Sbjct: 15 FDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74 Query: 337 RPLRVNVA---AERPQRGF*CGAA 275 R +RV+ A ++ RG+ G+A Sbjct: 75 RQIRVDQAGKSSDNRSRGYRGGSA 98
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 63.5 bits (153), Expect = 3e-10 Identities = 26/68 (38%), Positives = 47/68 (69%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D L F + ++ +++D +TG SRG+GFV+ S++D +A+ ++ GQ+++GRPL Sbjct: 173 DDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 232 Query: 328 RVNVAAER 305 R+N AA+R Sbjct: 233 RINWAAKR 240
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 63.2 bits (152), Expect = 4e-10 Identities = 26/72 (36%), Positives = 44/72 (61%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L + F G V+ A ++Y+R T RSRG+G+V +K + AI + G+E+DG Sbjct: 177 WSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDG 236 Query: 337 RPLRVNVAAERP 302 RP+ +++ +P Sbjct: 237 RPINCDMSTSKP 248 Score = 60.1 bits (144), Expect = 4e-09 Identities = 26/72 (36%), Positives = 47/72 (65%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A+ + ++F++HGEVV+ I ET + +GFG+V ++ ED A+ AL G+ +D Sbjct: 276 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 335 Query: 337 RPLRVNVAAERP 302 RP+R++ ++ RP Sbjct: 336 RPVRLDFSSPRP 347
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 62.8 bits (151), Expect = 5e-10 Identities = 32/74 (43%), Positives = 44/74 (59%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + ++ L +F+E+G V + DRETGR RGFGFV + + + +AI ALDG E G Sbjct: 10 YDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWMG 69 Query: 337 RPLRVNVAAERPQR 296 R L+VN A R R Sbjct: 70 RDLKVNKAKPRENR 83
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 62.4 bits (150), Expect = 7e-10 Identities = 28/70 (40%), Positives = 46/70 (65%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + L Q F+++G + +V DRET RSRGFGFVT + +D A+ A++G+ +DG Sbjct: 14 FETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDG 73 Query: 337 RPLRVNVAAE 308 R +RV+ A + Sbjct: 74 RQIRVDQAGK 83
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 62.4 bits (150), Expect = 7e-10 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +L +FSE G VV+ +VYDRETG+ +G+GF +E SA+ L+G+E G Sbjct: 25 YEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 84 Query: 337 RPLRVNVAAERPQR 296 R LRV+ AA + Sbjct: 85 RALRVDNAASEKNK 98
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 62.4 bits (150), Expect = 7e-10 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +L +FSE G VV+ +VYDRETG+ +G+GF +E SA+ L+G+E G Sbjct: 25 YEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 84 Query: 337 RPLRVNVAAERPQR 296 R LRV+ AA + Sbjct: 85 RALRVDNAASEKNK 98
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 62.0 bits (149), Expect = 9e-10 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +L +FSE G VV+ +VYDRETG+ +G+GF +E SA+ L+G+E G Sbjct: 25 YEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 84 Query: 337 RPLRVNVAAERPQR 296 R LRV+ AA + Sbjct: 85 RALRVDNAASEKNK 98
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 62.0 bits (149), Expect = 9e-10 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +L +FSE G VV+ +VYDRETG+ +G+GF +E SA+ L+G+E G Sbjct: 25 YEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 84 Query: 337 RPLRVNVAAERPQR 296 R LRV+ AA + Sbjct: 85 RALRVDNAASEKNK 98
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 62.0 bits (149), Expect = 9e-10 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +L +FSE G VV+ +VYDRETG+ +G+GF +E SA+ L+G+E G Sbjct: 25 YEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 84 Query: 337 RPLRVNVAAERPQR 296 R LRV+ AA + Sbjct: 85 RALRVDNAASEKNK 98
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 62.0 bits (149), Expect = 9e-10 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +L +FSE G VV+ +VYDRETG+ +G+GF +E SA+ L+G+E G Sbjct: 25 YEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 84 Query: 337 RPLRVNVAAERPQR 296 R LRV+ AA + Sbjct: 85 RALRVDNAASEKNK 98
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 60.1 bits (144), Expect = 4e-09 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + ++ L FS G + +V DRET RSRGFGF+T + E A+ A++G+ +DG Sbjct: 15 FNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDG 74 Query: 337 RPLRVNVAAE--RPQRG 293 R +RV+ A + R RG Sbjct: 75 RQIRVDHAGKSARGSRG 91
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 59.7 bits (143), Expect = 5e-09 Identities = 29/69 (42%), Positives = 45/69 (65%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS V A ++ ++ TGRSRG+GFV S++ +SAISA++GQE++G + Sbjct: 43 DEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNI 102 Query: 328 RVNVAAERP 302 VNVA + P Sbjct: 103 SVNVAKDWP 111
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 59.3 bits (142), Expect = 6e-09 Identities = 29/71 (40%), Positives = 45/71 (63%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 + L + EHG + A ++YD+ +GRSR FGFVTM + ED ++ I L+ E+ GR ++ Sbjct: 97 NDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIK 156 Query: 325 VNVAAERPQRG 293 VN+ E+P G Sbjct: 157 VNI-TEKPLEG 166 Score = 53.1 bits (126), Expect = 4e-07 Identities = 25/61 (40%), Positives = 41/61 (67%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L FSE G+V+ A + T +S GFGFV+ +S+E++++AI AL+ ++G+ +RVN Sbjct: 200 LKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNK 259 Query: 316 A 314 A Sbjct: 260 A 260
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 59.3 bits (142), Expect = 6e-09 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + ++ L FS G + +V DRET RSRGFGF+T + E A+ A++G+ +DG Sbjct: 15 FNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDG 74 Query: 337 RPLRVNVAAE--RPQRGF*CGA 278 R +RV+ A + R RG GA Sbjct: 75 RQIRVDHAGKSARGTRGGGFGA 96
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 58.9 bits (141), Expect = 8e-09 Identities = 25/72 (34%), Positives = 46/72 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W +D L Q F E+G +V A ++ D ++GRS+G+G+V + E +A++A +E+DG Sbjct: 272 WNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDG 331 Query: 337 RPLRVNVAAERP 302 R + ++++ RP Sbjct: 332 RMVNLDLSNPRP 343 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA--LDGQEM 344 + A + L F G++ + + D ++GR +GFG+VT + D+DSA ++G + Sbjct: 375 FNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFS---DIDSAKKCVEMNGHFI 431 Query: 343 DGRPLRVNVAAERPQRG 293 GRP R++ + R G Sbjct: 432 AGRPCRLDFSTPRTGGG 448
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 58.2 bits (139), Expect = 1e-08 Identities = 28/71 (39%), Positives = 47/71 (66%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL ++FS G ++ ++ D +TGRSRGFGFV + E+ A+S ++G+E++GR + Sbjct: 203 DDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261 Query: 328 RVNVAAERPQR 296 V A +R +R Sbjct: 262 YVGRAQKRIER 272 Score = 48.9 bits (115), Expect = 8e-06 Identities = 24/71 (33%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS +G + +A ++ E G S+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 35.8 bits (81), Expect = 0.071 Identities = 22/77 (28%), Positives = 38/77 (49%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D SRG+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGA 278 V R +R GA Sbjct: 169 FVGHFKSRRERELEYGA 185
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 56.6 bits (135), Expect = 4e-08 Identities = 27/71 (38%), Positives = 47/71 (66%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL ++FS G ++ ++ D ++GRSRGFGFV + E+ A+S ++G+E++GR + Sbjct: 203 DDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261 Query: 328 RVNVAAERPQR 296 V A +R +R Sbjct: 262 YVGRAQKRIER 272 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + F +G + +A ++ E G S+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDDRLRKEFLPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 35.0 bits (79), Expect = 0.12 Identities = 22/77 (28%), Positives = 37/77 (48%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D SRG+GFV + E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGA 278 V R +R GA Sbjct: 169 FVGHFKSRRERELEYGA 185
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 55.1 bits (131), Expect = 1e-07 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L ++FS +G + +VYD+ TGRSRGF FV +D A+ +G E+DGR +RV+ Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192 Query: 316 A----AERPQRGF*CGAAAES 266 + A P G G S Sbjct: 193 SITKRAHTPTPGIYMGRPTHS 213
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 55.1 bits (131), Expect = 1e-07 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L ++FS +G + +VYD+ TGRSRGF FV +D A+ +G E+DGR +RV+ Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194 Query: 316 A----AERPQRGF*CGAAAES 266 + A P G G S Sbjct: 195 SITKRAHTPTPGIYMGRPTHS 215
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 54.7 bits (130), Expect = 1e-07 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 1/124 (0%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNAT-IVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + ++ L FS G ++ I+ D +TG S+G+ F+ AS + D+AI A++GQ + Sbjct: 110 EIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169 Query: 337 RPLRVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQKTEACHHLKLPH*PPDAG 158 RP+ V+ A ++ +G G+AAE + A+ L + + H L PP + Sbjct: 170 RPITVSYAFKKDSKGERHGSAAERLL---------AAQNPLSQADRPHQLFADAPPPPSA 220 Query: 157 SPPI 146 P+ Sbjct: 221 PNPV 224 Score = 52.8 bits (125), Expect = 6e-07 Identities = 26/62 (41%), Positives = 41/62 (66%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L ++F + G VVN + DR TG+ +G+GFV S+ED D AI ++ ++ G+P+RVN Sbjct: 29 LWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNK 88 Query: 316 AA 311 A+ Sbjct: 89 AS 90
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 54.7 bits (130), Expect = 1e-07 Identities = 25/65 (38%), Positives = 39/65 (60%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 308 +F G++ N ++ D +TGRS+G+GF+T + E A+ L+G E+ GRP+RV E Sbjct: 282 IFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTE 341 Query: 307 RPQRG 293 R G Sbjct: 342 RLDGG 346
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 54.7 bits (130), Expect = 1e-07 Identities = 26/71 (36%), Positives = 46/71 (64%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL ++FS G ++ ++ D +GRSRGFGFV + E+ A++ ++G+E++GR + Sbjct: 203 DDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMV 261 Query: 328 RVNVAAERPQR 296 V A +R +R Sbjct: 262 YVGRAQKRIER 272 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS +G + + ++ E G S+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDDRLRKEFSPYGTITSTKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 36.6 bits (83), Expect = 0.042 Identities = 24/77 (31%), Positives = 41/77 (53%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G++++ +V D E G SRG+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGDILSCKVVCD-EYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGA 278 V R +R GA Sbjct: 169 FVGHFKSRRERELEYGA 185
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L ++FS++G + + +IVYD+++ RSRGF FV + +D A +G E+DGR +RV+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 193 Query: 316 A-AERP 302 + +RP Sbjct: 194 SITKRP 199
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L ++FS++G + + +IVYD+++ RSRGF FV + +D A +G E+DGR +RV+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 193 Query: 316 A-AERP 302 + +RP Sbjct: 194 SITKRP 199
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L ++FS++G + + +IVYD+++ RSRGF FV + +D A +G E+DGR +RV+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 193 Query: 316 A-AERP 302 + +RP Sbjct: 194 SITKRP 199
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 54.3 bits (129), Expect = 2e-07 Identities = 24/61 (39%), Positives = 39/61 (63%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 F+ G + +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A + Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185 Query: 304 P 302 P Sbjct: 186 P 186
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 54.3 bits (129), Expect = 2e-07 Identities = 24/61 (39%), Positives = 39/61 (63%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 F+ G + +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A + Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185 Query: 304 P 302 P Sbjct: 186 P 186
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 53.9 bits (128), Expect = 3e-07 Identities = 23/69 (33%), Positives = 41/69 (59%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + + L +F ++G +V ++ DRET +SRGF FVT+ S D A ++G+ +DG+ Sbjct: 18 ETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGK 77 Query: 334 PLRVNVAAE 308 ++V A + Sbjct: 78 AIKVEQATK 86
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ L ++F ++G V + I DR T SRGF FV K D + A+ A+DG +DG Sbjct: 22 YRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDG 81 Query: 337 RPLRVNVA 314 R LRV +A Sbjct: 82 RELRVQMA 89
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ L ++F ++G V + I DR T SRGF FV K D + A+ A+DG +DG Sbjct: 22 YRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDG 81 Query: 337 RPLRVNVA 314 R LRV +A Sbjct: 82 RELRVQMA 89
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ L ++F ++G V + I DR T SRGF FV K D + A+ A+DG +DG Sbjct: 22 YRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDG 81 Query: 337 RPLRVNVA 314 R LRV +A Sbjct: 82 RELRVQMA 89
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ L ++F ++G V + I DR T SRGF FV K D + A+ A+DG +DG Sbjct: 22 YRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDG 81 Query: 337 RPLRVNVA 314 R LRV +A Sbjct: 82 RELRVQMA 89
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 53.5 bits (127), Expect = 3e-07 Identities = 24/61 (39%), Positives = 40/61 (65%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 F+ G++ +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A + Sbjct: 134 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK 193 Query: 304 P 302 P Sbjct: 194 P 194
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 53.5 bits (127), Expect = 3e-07 Identities = 24/61 (39%), Positives = 40/61 (65%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 F+ G++ +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A + Sbjct: 117 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK 176 Query: 304 P 302 P Sbjct: 177 P 177
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/68 (39%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ L ++F ++G V + I DR T SRGF FV K D + A+ A+DG +DG Sbjct: 23 YRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82 Query: 337 RPLRVNVA 314 R LRV +A Sbjct: 83 RELRVQMA 90
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 53.5 bits (127), Expect = 3e-07 Identities = 23/69 (33%), Positives = 40/69 (57%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + + L +F ++G +V ++ DRET +SRGF FVT S D A ++G+ +DG+ Sbjct: 18 ETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGK 77 Query: 334 PLRVNVAAE 308 ++V A + Sbjct: 78 AIKVEQATK 86
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 53.1 bits (126), Expect = 4e-07 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 308 +F G + + ++ D ETGRS+G+GF+T + E A+ L+G E+ GRP++V E Sbjct: 269 IFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTE 328 Query: 307 R 305 R Sbjct: 329 R 329
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 53.1 bits (126), Expect = 4e-07 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 308 +F G + + ++ D ETGRS+G+GF+T + E A+ L+G E+ GRP++V E Sbjct: 269 IFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTE 328 Query: 307 R 305 R Sbjct: 329 R 329
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 53.1 bits (126), Expect = 4e-07 Identities = 23/71 (32%), Positives = 46/71 (64%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL ++F + G ++ ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + Sbjct: 203 DDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 262 YVGRAQKKVER 272 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 37.0 bits (84), Expect = 0.032 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D E G S+G+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGAAAE 269 V R +R GA A+ Sbjct: 169 FVGRFKSRKEREAELGARAK 188
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 53.1 bits (126), Expect = 4e-07 Identities = 23/71 (32%), Positives = 46/71 (64%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL ++F + G ++ ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + Sbjct: 203 DDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 262 YVGRAQKKVER 272 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 35.4 bits (80), Expect = 0.093 Identities = 23/80 (28%), Positives = 42/80 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D E G S+G+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGAAAE 269 V + +R GA A+ Sbjct: 169 FVGRFKSQKEREAELGARAK 188
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 52.8 bits (125), Expect = 6e-07 Identities = 23/70 (32%), Positives = 45/70 (64%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D RL +MF ++G ++ ++ D + G+S+GFGFV+ ED A+ ++G++M+G+ + Sbjct: 204 DERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMF 262 Query: 325 VNVAAERPQR 296 V A ++ +R Sbjct: 263 VGRAQKKVER 272 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/71 (33%), Positives = 43/71 (60%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + F G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKEFLPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 37.0 bits (84), Expect = 0.032 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D E G S+G+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGAAAE 269 V R +R GA A+ Sbjct: 169 FVGRFKSRKEREAELGARAK 188
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 52.4 bits (124), Expect = 7e-07 Identities = 23/71 (32%), Positives = 45/71 (63%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL +F + G ++ ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + Sbjct: 203 DDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 262 YVGRAQKKVER 272 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 37.0 bits (84), Expect = 0.032 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D E G S+G+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGAAAE 269 V R +R GA A+ Sbjct: 169 FVGRFKSRKEREAELGARAK 188
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 52.4 bits (124), Expect = 7e-07 Identities = 23/71 (32%), Positives = 45/71 (63%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL +F + G ++ ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + Sbjct: 203 DDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 262 YVGRAQKKVER 272 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 37.0 bits (84), Expect = 0.032 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D E G S+G+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGAAAE 269 V R +R GA A+ Sbjct: 169 FVGRFKSRKEREAELGARAK 188
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A++S L QMF G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 288 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 347 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 348 LQVSFKTNKTHK 359 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 201 KFANNPSQK 209 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/61 (32%), Positives = 36/61 (59%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ Sbjct: 55 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114 Query: 316 A 314 A Sbjct: 115 A 115
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 52.4 bits (124), Expect = 7e-07 Identities = 23/71 (32%), Positives = 45/71 (63%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL +F + G ++ ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + Sbjct: 203 DDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 262 YVGRAQKKVER 272 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKAFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 36.2 bits (82), Expect = 0.055 Identities = 24/76 (31%), Positives = 39/76 (51%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L S G +++ +V D E G S+G+GFV + E + AI ++G ++GR + V Sbjct: 115 LYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ 172 Query: 316 AAERPQRGF*CGAAAE 269 R +R GA A+ Sbjct: 173 FKSRKEREAELGARAK 188
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A++S L QMF G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 287 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 346 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 347 LQVSFKTNKTHK 358 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 201 KFANNPSQK 209 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/61 (32%), Positives = 36/61 (59%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ Sbjct: 55 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114 Query: 316 A 314 A Sbjct: 115 A 115
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A++S L QMF G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 287 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 346 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 347 LQVSFKTNKTHK 358 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 201 KFANNPSQK 209 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/61 (32%), Positives = 36/61 (59%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ Sbjct: 55 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114 Query: 316 A 314 A Sbjct: 115 A 115
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A++S L QMF G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 287 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 346 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 347 LQVSFKTNKTHK 358 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 201 KFANNPSQK 209 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/61 (32%), Positives = 36/61 (59%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ Sbjct: 55 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114 Query: 316 A 314 A Sbjct: 115 A 115
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/69 (31%), Positives = 39/69 (56%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + + L +F ++G +V ++ DRET +SRGF FVT S D ++G+ +DG+ Sbjct: 18 ETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGK 77 Query: 334 PLRVNVAAE 308 ++V A + Sbjct: 78 AIKVEQATK 86
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + GF Sbjct: 596 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 653 Score = 37.4 bits (85), Expect = 0.025 Identities = 15/48 (31%), Positives = 30/48 (62%) Frame = -1 Query: 448 VYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 V + G+S+G+ F+ AS ED A+++ + +E++GR +R+ + R Sbjct: 514 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 561 Score = 29.6 bits (65), Expect = 5.1 Identities = 11/44 (25%), Positives = 22/44 (50%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 299 G+S+G ++ ++ D + G E+DGR + + E+ Q Sbjct: 426 GKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 469 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -1 Query: 460 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 N V D G +R FG+V S EDL+ A+ L G ++ G +++ Sbjct: 334 NDLAVVDVRIGMTRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKL 378
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + GF Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 652 Score = 37.4 bits (85), Expect = 0.025 Identities = 15/48 (31%), Positives = 30/48 (62%) Frame = -1 Query: 448 VYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 V + G+S+G+ F+ AS ED A+++ + +E++GR +R+ + R Sbjct: 513 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 560 Score = 29.6 bits (65), Expect = 5.1 Identities = 11/44 (25%), Positives = 22/44 (50%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 299 G+S+G ++ ++ D + G E+DGR + + E+ Q Sbjct: 425 GKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 468 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -1 Query: 460 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 N V D G +R FG+V S EDL+ A+ L G ++ G +++ Sbjct: 333 NDLAVVDVRIGMTRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKL 377
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/73 (32%), Positives = 43/73 (58%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 +A++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 294 EADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGER 353 Query: 334 PLRVNVAAERPQR 296 L+V+ + + Sbjct: 354 VLQVSFKTSKQHK 366 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNV 317 Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 143 QLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF 202 Query: 316 AAERPQR 296 A Q+ Sbjct: 203 ANNPSQK 209 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/58 (32%), Positives = 36/58 (62%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 +F G++ + +V D+ TG+S G+GFV + D D AI+ L+G ++ + ++V+ A Sbjct: 58 LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/73 (32%), Positives = 43/73 (58%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 +A++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 294 EADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGER 353 Query: 334 PLRVNVAAERPQR 296 L+V+ + + Sbjct: 354 VLQVSFKTSKQHK 366 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNV 317 Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 143 QLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF 202 Query: 316 AAERPQR 296 A Q+ Sbjct: 203 ANNPSQK 209 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/58 (32%), Positives = 36/58 (62%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 +F G++ + +V D+ TG+S G+GFV + D D AI+ L+G ++ + ++V+ A Sbjct: 58 LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + GF Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 652 Score = 36.6 bits (83), Expect = 0.042 Identities = 15/48 (31%), Positives = 29/48 (60%) Frame = -1 Query: 448 VYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 V + G+S+G+ F+ AS ED A+++ + E++GR +R+ + R Sbjct: 513 VPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPR 560 Score = 32.7 bits (73), Expect = 0.60 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = -1 Query: 436 ETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 296 + G+S+G ++ S+ D + + G E+DGR + + E+ QR Sbjct: 424 QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQR 470 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -1 Query: 460 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 N V D TG +R FG+V S EDL+ A+ L G ++ G +++ Sbjct: 334 NDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKL 378
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + GF Sbjct: 597 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 654 Score = 37.4 bits (85), Expect = 0.025 Identities = 15/48 (31%), Positives = 30/48 (62%) Frame = -1 Query: 448 VYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 V + G+S+G+ F+ AS ED A+++ + +E++GR +R+ + R Sbjct: 515 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 562 Score = 29.6 bits (65), Expect = 5.1 Identities = 11/44 (25%), Positives = 22/44 (50%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 299 G+S+G ++ ++ D + G E+DGR + + E+ Q Sbjct: 427 GKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 470 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -1 Query: 460 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 N V D G +R FG+V S EDL+ A+ L G ++ G +++ Sbjct: 335 NDLAVVDVRIGMTRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKL 379
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + GF Sbjct: 592 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 649 Score = 33.1 bits (74), Expect = 0.46 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Frame = -1 Query: 436 ETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGA----AAE 269 + G+S+G ++ S+ D + + G E+DGR + + E+ QR G + E Sbjct: 425 QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSGE 484 Query: 268 SMAWRFS-WTHGNTAEMLLQKTEACHHLKLPH*P 170 S S ++ T E L + E +K+P P Sbjct: 485 SKTLVLSNLSYSATKETLEEVFEKATFIKVPQNP 518 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -1 Query: 460 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 N V D TG +R FG+V S EDL+ A+ L G ++ G +++ Sbjct: 335 NDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKL 379
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/58 (44%), Positives = 37/58 (63%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + GF Sbjct: 598 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 655 Score = 35.8 bits (81), Expect = 0.071 Identities = 14/42 (33%), Positives = 27/42 (64%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 G+S+G+ F+ AS ED A+++ + E++GR +R+ + R Sbjct: 522 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPR 563 Score = 34.7 bits (78), Expect = 0.16 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Frame = -1 Query: 436 ETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGA----AAE 269 + GRS+G ++ S+ D + + G E+DGR + + E+ QR G + E Sbjct: 427 QDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGE 486 Query: 268 SMAWRFS-WTHGNTAEMLLQKTEACHHLKLPH*P 170 S S ++ T E L + E +K+P P Sbjct: 487 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNP 520 Score = 29.6 bits (65), Expect = 5.1 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -1 Query: 460 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 N D TG +R FG+V S EDL+ A+ L G ++ G +++ Sbjct: 337 NDLAAVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKL 381
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 50.8 bits (120), Expect = 2e-06 Identities = 30/76 (39%), Positives = 44/76 (57%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L FS G++V A V E GRS+G+GFV+ S E D+AI A++ Q + +P+ V+ Sbjct: 115 LYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSY 174 Query: 316 AAERPQRGF*CGAAAE 269 A +R +G G AE Sbjct: 175 AFKREGKGERHGDIAE 190 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/66 (34%), Positives = 37/66 (56%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 DS L ++ + G VVN I DR GFGF ++D++ A L+ ++ G+P+R Sbjct: 24 DSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIR 83 Query: 325 VNVAAE 308 VN A++ Sbjct: 84 VNRASQ 89
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNAT-IVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + ++ L FS G ++ I+ D ++G S+GF F+ AS E D+A+ A++GQ + Sbjct: 110 EVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCN 169 Query: 337 RPLRVNVAAERPQRGF*CGAAAESM 263 R + V+ A +R +G G AAE M Sbjct: 170 RAITVSYAFKRDSKGERHGTAAERM 194 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/68 (35%), Positives = 40/68 (58%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + +S L ++ + G VV+ + DR T +GFGFV +ED D AI L+ ++ G+ Sbjct: 23 KVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGK 82 Query: 334 PLRVNVAA 311 P++VN A+ Sbjct: 83 PIKVNKAS 90
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQ 350 W+ L + F G++++ ++ + E+GRSRGFGFVT A +++ + LDG+ Sbjct: 16 WETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGR 75 Query: 349 EMDGRPLRVNVAAERPQRG 293 +D +P ++P++G Sbjct: 76 TIDPKPCNPR-TLQKPKKG 93 Score = 36.2 bits (82), Expect = 0.055 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLD 377 ++ L F+ +G+V I+YD+E +SRGFGF++ + ++ Sbjct: 109 ETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVE 151
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + D+ L + F G++ A ++ DR+TG+SRG+GFVTMA + D A +DG Sbjct: 41 YHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD-PNPIIDG 99 Query: 337 RPLRVNVA 314 R VN+A Sbjct: 100 RKANVNLA 107
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 50.4 bits (119), Expect = 3e-06 Identities = 22/71 (30%), Positives = 45/71 (63%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + F ++G ++ ++ D + G+SRGFGFV+ ED A+ ++G++++G+ + Sbjct: 203 DDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAI 261 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 262 FVGRAQKKVER 272 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/71 (33%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL + F+ G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDERLRKEFTPFGSITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374 Score = 37.0 bits (84), Expect = 0.032 Identities = 24/80 (30%), Positives = 42/80 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G +++ +V D E G S+G+GFV ++E + AI ++G ++ R + Sbjct: 111 DNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168 Query: 328 RVNVAAERPQRGF*CGAAAE 269 V R +R GA A+ Sbjct: 169 FVGRFKSRKEREAELGARAK 188
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 50.4 bits (119), Expect = 3e-06 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A++ L QMF G V N ++ D T + +GFGFVTM + E+ AI++L+G + + Sbjct: 255 ADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKI 314 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 315 LQVSFKTNKSHK 326 Score = 46.2 bits (108), Expect = 5e-05 Identities = 21/61 (34%), Positives = 37/61 (60%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +FS GEV +A ++ D+ G S G+GFV + +D + AI+ L+G + + ++V+ Sbjct: 36 LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSY 95 Query: 316 A 314 A Sbjct: 96 A 96 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVA 314 MFS G ++N+ ++ D+ TG SRG F+ + + + AI++ +G + G P+ V A Sbjct: 125 MFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184 Query: 313 AERPQ 299 A Q Sbjct: 185 ANPNQ 189
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 50.4 bits (119), Expect = 3e-06 Identities = 24/71 (33%), Positives = 46/71 (64%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L +MFSE+G V ++ ++ + + G SRGFGFV ++ E+ A+S ++G+ + +PL Sbjct: 344 DDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402 Query: 328 RVNVAAERPQR 296 + +A + R Sbjct: 403 YIALAQRKEDR 413 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/71 (30%), Positives = 38/71 (53%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L + FS G +++ + D TGRS+G+GFV +E +AI L+G M+ + + Sbjct: 148 DNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQV 206 Query: 328 RVNVAAERPQR 296 V R +R Sbjct: 207 FVGHFIRRQER 217
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 50.1 bits (118), Expect = 4e-06 Identities = 22/73 (30%), Positives = 46/73 (63%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + +D L ++FS+ G+ ++ ++ D G+S+GFGFV+ ED + A+ ++G+E+ G+ Sbjct: 201 EVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259 Query: 334 PLRVNVAAERPQR 296 + V A ++ +R Sbjct: 260 IIFVGRAQKKVER 272 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/71 (33%), Positives = 44/71 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ + +PL Sbjct: 306 DDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 364 YVALAQRKEER 374
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 50.1 bits (118), Expect = 4e-06 Identities = 25/71 (35%), Positives = 43/71 (60%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D RL FS +G + +A ++ D E GRS+GFGFV + + A++ L+G+ + +PL Sbjct: 299 DDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPL 357 Query: 328 RVNVAAERPQR 296 V +A + +R Sbjct: 358 YVALAQRKEER 368 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/72 (31%), Positives = 47/72 (65%), Gaps = 1/72 (1%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM-DGRP 332 +D +L + F +G++ + ++ +E G+S+GFGFV + E ++A+ AL+G++M +G+ Sbjct: 195 DDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253 Query: 331 LRVNVAAERPQR 296 L V A ++ +R Sbjct: 254 LYVARAQKKAER 265 Score = 37.7 bits (86), Expect = 0.019 Identities = 18/71 (25%), Positives = 39/71 (54%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ + FS G +++ + D E G S+G+GFV ++E +++I ++G ++G+ + Sbjct: 102 DNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKV 160 Query: 328 RVNVAAERPQR 296 V R +R Sbjct: 161 YVGKFIPRKER 171
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 50.1 bits (118), Expect = 4e-06 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A++ L QMF G V N ++ D T + +GFGFVTM + E+ AI++L+G + + Sbjct: 255 ADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKI 314 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 315 LQVSFKTNKSHK 326 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +FS GEV +A ++ D+ G S G+GFV + +D + AIS L+G + + ++V+ Sbjct: 36 LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSY 95 Query: 316 A 314 A Sbjct: 96 A 96 Score = 42.7 bits (99), Expect = 6e-04 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVA 314 MFS G ++N+ ++ D+ TG SRG F+ + + + AI++ G + G P+ V A Sbjct: 125 MFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFA 184 Query: 313 AERPQ 299 A Q Sbjct: 185 ANPNQ 189
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 49.7 bits (117), Expect = 5e-06 Identities = 22/76 (28%), Positives = 44/76 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + +S+L + F +G + +VY++ +G+ RG+ F+ + D+ SA DG+++DG Sbjct: 112 YDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 171 Query: 337 RPLRVNVAAERPQRGF 290 R + V+V R +G+ Sbjct: 172 RRVLVDVERGRTVKGW 187
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 49.3 bits (116), Expect = 6e-06 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER--PQRG 293 VNA IV DR+TG S+GFGFV ++ ED +A A++ E+DG + ++ A + QRG Sbjct: 526 VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQRG 584 Score = 37.0 bits (84), Expect = 0.032 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 266 GR++GF F+ +S ED A+ + + E++GR +R+ + +G G +A+S Sbjct: 447 GRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQS 501
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 49.3 bits (116), Expect = 6e-06 Identities = 22/76 (28%), Positives = 43/76 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + +S+L + F +G + +VY + +G+ RG+ F+ + D+ SA DG+++DG Sbjct: 112 YDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 171 Query: 337 RPLRVNVAAERPQRGF 290 R + V+V R +G+ Sbjct: 172 RRVLVDVERGRTVKGW 187
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/73 (34%), Positives = 44/73 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + +D RL FS G + +A I+ D E G+S+GFGFV + E+ + A++ ++ + + G+ Sbjct: 374 EVDDERLKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGK 432 Query: 334 PLRVNVAAERPQR 296 PL V +A + R Sbjct: 433 PLYVALAQRKEVR 445 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/64 (32%), Positives = 37/64 (57%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 308 +F + GE+ + ++V D + + RGFGFV A+ E A+ L+ +E G+ L V A + Sbjct: 280 LFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQK 338 Query: 307 RPQR 296 + +R Sbjct: 339 KHER 342
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/68 (36%), Positives = 39/68 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + D+ L + F G++ A ++ DR+TG+SRG+GFVTMA + + A +DG Sbjct: 20 YHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD-PNPIIDG 78 Query: 337 RPLRVNVA 314 R VN+A Sbjct: 79 RKANVNLA 86
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 49.3 bits (116), Expect = 6e-06 Identities = 22/76 (28%), Positives = 43/76 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + +S+L + F +G + +VY + +G+ RG+ F+ + D+ SA DG+++DG Sbjct: 112 YDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 171 Query: 337 RPLRVNVAAERPQRGF 290 R + V+V R +G+ Sbjct: 172 RRVLVDVERGRTVKGW 187
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 +Q + L + F +G++ + I D+ + +S+GFGFV + D + A+ DG+ +DG Sbjct: 28 YQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDG 87 Query: 337 RPLRVNVAA-ERP 302 R LRV +A +RP Sbjct: 88 RELRVTLAKYDRP 100
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 48.9 bits (115), Expect = 8e-06 Identities = 23/72 (31%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 +++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 301 SDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 360 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 361 LQVSFKTNKAHK 372 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 200 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 201 KFANNPSQK 209 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/58 (32%), Positives = 35/58 (60%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ A Sbjct: 58 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 48.9 bits (115), Expect = 8e-06 Identities = 23/72 (31%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 +++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 313 SDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 372 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 373 LQVSFKTNKAHK 384 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 153 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 212 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 213 KFANNPSQK 221 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/58 (32%), Positives = 35/58 (60%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ A Sbjct: 70 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 127
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 48.9 bits (115), Expect = 8e-06 Identities = 23/72 (31%), Positives = 42/72 (58%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 +++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+G + R Sbjct: 308 SDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 367 Query: 331 LRVNVAAERPQR 296 L+V+ + + Sbjct: 368 LQVSFKTNKAHK 379 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRV 323 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V Sbjct: 148 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 207 Query: 322 NVAAERPQR 296 A Q+ Sbjct: 208 KFANNPSQK 216 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/58 (32%), Positives = 35/58 (60%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 +F GE+ + +V D+ TG+S G+GFV +D + AI+ L+G + + ++V+ A Sbjct: 65 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L Q+FS+ G V + I+ + T SRGFGF++ ++ E+ SAI L+ QE GR L Sbjct: 113 QEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVL 172 Query: 328 RVNVA 314 V A Sbjct: 173 NVQKA 177
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 48.9 bits (115), Expect = 8e-06 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA----LDGQ 350 W L FS++GEVV+ I+ D+ T +SRGFGFV + + +++ LDG+ Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78 Query: 349 EMDGRPLR---VNVAAERPQRGF*CGAAAES 266 +D +P + RP+ G+ G ++S Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDS 109 Score = 42.4 bits (98), Expect = 8e-04 Identities = 20/70 (28%), Positives = 38/70 (54%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 ++ L + F + G V ++YD E R RGFGF+T ++ +D A++ + ++ G+ + Sbjct: 126 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVE 184 Query: 325 VNVAAERPQR 296 V A R + Sbjct: 185 VKRAEPRDSK 194
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/66 (30%), Positives = 42/66 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + ++ +FS++GE+VN +V D++TG+S+GF F+ + A+ +G ++ G Sbjct: 45 YELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKG 104 Query: 337 RPLRVN 320 R +RV+ Sbjct: 105 RTIRVD 110
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/66 (30%), Positives = 42/66 (63%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + ++ +FS++GE+VN +V D++TG+S+GF F+ + A+ +G ++ G Sbjct: 45 YELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKG 104 Query: 337 RPLRVN 320 R +RV+ Sbjct: 105 RTIRVD 110
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/67 (40%), Positives = 40/67 (59%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L QMF + G++++ I+++ E G S+GFGFVT + D D A L G ++GR + Sbjct: 130 DPDLRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIE 187 Query: 325 VNVAAER 305 VN A R Sbjct: 188 VNNATAR 194
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/67 (40%), Positives = 40/67 (59%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L QMF + G++++ I+++ E G S+GFGFVT + D D A L G ++GR + Sbjct: 134 DPDLRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIE 191 Query: 325 VNVAAER 305 VN A R Sbjct: 192 VNNATAR 198
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/67 (40%), Positives = 40/67 (59%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L QMF + G++++ I+++ E G S+GFGFVT + D D A L G ++GR + Sbjct: 129 DPDLRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIE 186 Query: 325 VNVAAER 305 VN A R Sbjct: 187 VNNATAR 193
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/70 (34%), Positives = 44/70 (62%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L +MFSE+G V + ++ + + G SRGFGFV ++ E+ A+ ++G+ + +PL Sbjct: 341 DEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLY 399 Query: 325 VNVAAERPQR 296 V +A + +R Sbjct: 400 VALAQRKEER 409 Score = 38.1 bits (87), Expect = 0.014 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L + FS G +++ + D GRS+G+GFV +E +AI L+G ++ + + Sbjct: 144 DNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQV 202 Query: 328 RVNVAAERPQR 296 V R R Sbjct: 203 FVGHFVRRQDR 213
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +FS+HG+V+ A +V + + +R +GFVTM++ ++ IS L E+ GR + V Sbjct: 467 LKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEK 526 Query: 316 AAERP 302 A P Sbjct: 527 AKNEP 531
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 47.8 bits (112), Expect = 2e-05 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA----LDGQ 350 W L FS++GEVV+ I+ D+ T +SRGFGFV + + +++ LDG+ Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78 Query: 349 EMDGRPLR---VNVAAERPQRGF*CGAAAES 266 +D +P + RP+ G+ G +++ Sbjct: 79 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDN 109 Score = 42.4 bits (98), Expect = 8e-04 Identities = 20/70 (28%), Positives = 38/70 (54%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 ++ L + F + G V ++YD E R RGFGF+T ++ +D A++ + ++ G+ + Sbjct: 126 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVE 184 Query: 325 VNVAAERPQR 296 V A R + Sbjct: 185 VKRAEPRDSK 194
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = -1 Query: 463 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP--QRG 293 ++A IV DR+TG S+GFGFV +S ED +A A++ E+DG + ++ A + QRG Sbjct: 577 ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAKPKGEFQRG 635 Score = 35.0 bits (79), Expect = 0.12 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 293 GR +G+ FV + ED A+++ + E++GR +R+ ++ Q+G Sbjct: 495 GRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKG 540 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/52 (25%), Positives = 30/52 (57%) Frame = -1 Query: 451 IVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 296 +V ++E G S+G ++ ++ + + A+ G E+DGR + ++ E+ Q+ Sbjct: 399 LVLNKE-GSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQ 449 Score = 29.6 bits (65), Expect = 5.1 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = -1 Query: 430 GRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 G S+ FG+V S ED+D A+ L+G+++ G +++ A + Sbjct: 318 GSSKRFGYVDFLSAEDMDKALQ-LNGKKLMGLEIKLEKAKSK 358
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA----LDGQ 350 W L FS++GEVV+ I+ D+ T +SRGFGFV + + +++ LDG+ Sbjct: 19 WSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 78 Query: 349 EMDGRPLR---VNVAAERPQRGF 290 +D +P + RP+ G+ Sbjct: 79 NIDPKPCTPRGMQPERSRPREGW 101 Score = 42.7 bits (99), Expect = 6e-04 Identities = 20/70 (28%), Positives = 38/70 (54%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 ++ L + F+ G V ++YD E R RGFGF+T ++ +D A++ + ++ G+ + Sbjct: 127 ETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVE 185 Query: 325 VNVAAERPQR 296 V A R + Sbjct: 186 VKRAEPRDSK 195
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RP 332 D L ++F ++G +V I+ D+ TGR RG FV +E+ AISAL+ +G +P Sbjct: 201 DDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQP 260 Query: 331 LRVNVAAE 308 L V +A E Sbjct: 261 LTVRLAEE 268
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/70 (32%), Positives = 41/70 (58%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L F E+G++ +A ++ D E G+S+GFGFV + +D A+ +L+G + D + Sbjct: 228 DDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWY 286 Query: 325 VNVAAERPQR 296 V A ++ +R Sbjct: 287 VGRAQKKSER 296 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/70 (34%), Positives = 41/70 (58%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L ++FS G V ++ ++ D G S+G GFV A+ E+ A+S L G+ ++ +PL Sbjct: 331 DEKLKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLY 389 Query: 325 VNVAAERPQR 296 V +A + R Sbjct: 390 VAIAQRKEDR 399 Score = 43.1 bits (100), Expect = 4e-04 Identities = 23/68 (33%), Positives = 35/68 (51%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 DS+L F + G VV + D T RS G+G+V + +D AI L+ + G+P+R Sbjct: 49 DSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIR 108 Query: 325 VNVAAERP 302 V + P Sbjct: 109 VMYSHRDP 116 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 FS G +V+ + D +G+S+G+GFV A++E AI L+G ++ + + V R Sbjct: 144 FSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR 202 Query: 304 PQR 296 +R Sbjct: 203 QER 205
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/75 (34%), Positives = 42/75 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L Q F + GE+V+ ++ D +T RSRGFGF+T + +D A +A ++DG Sbjct: 26 YRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARP-HKVDG 84 Query: 337 RPLRVNVAAERPQRG 293 R + A R + G Sbjct: 85 RVVEPKRAVPRTEIG 99 Score = 39.3 bits (90), Expect = 0.006 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLD 377 + E++ L F ++G VV+A IV D+ET + RGF FV + +D Sbjct: 118 EMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVD 163
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/65 (36%), Positives = 39/65 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + E++ L Q+F G V + IV D T + +G+GFV+M + ++ AI AL+G M R Sbjct: 412 ETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNR 471 Query: 334 PLRVN 320 L+V+ Sbjct: 472 VLQVS 476
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/65 (36%), Positives = 39/65 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + E++ L Q+F G V + IV D T + +G+GFV+M + ++ AI AL+G M R Sbjct: 448 ETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNR 507 Query: 334 PLRVN 320 L+V+ Sbjct: 508 VLQVS 512
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/71 (33%), Positives = 43/71 (60%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L + F + G++ + ++ D +T RSRGFGFVT + E++D+++SA ++DG Sbjct: 36 FETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARP-HKVDG 94 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 95 RVVEPKRAVSR 105 Score = 33.1 bits (74), Expect = 0.46 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L +G++ ++ DR++G+ RGF FVT + +D + Sbjct: 130 EEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 47.0 bits (110), Expect = 3e-05 Identities = 23/73 (31%), Positives = 43/73 (58%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + D + ++F++ G +V+A++ D + G+ +GFGFV ED A+ AL+ E++G Sbjct: 228 ETTDEQFQELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGE 286 Query: 334 PLRVNVAAERPQR 296 L V A ++ +R Sbjct: 287 KLYVGRAQKKNER 299 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L + F+ +G + +A ++ E G+S+GFGFV ++ E+ AI+ + Q + G+PL Sbjct: 333 DDEKLEEEFAPYGTITSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 391 Query: 328 RVNVAAERPQR 296 V +A + R Sbjct: 392 YVAIAQRKDVR 402 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/71 (32%), Positives = 39/71 (54%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ++ L FS G+++++ I D E G+S+GFGFV + AI AL+G ++G+ + Sbjct: 137 DNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 195 Query: 328 RVNVAAERPQR 296 V R +R Sbjct: 196 YVAPHLSRKER 206
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/71 (33%), Positives = 43/71 (60%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L + F + G++ + ++ D +T RSRGFGFVT + E++D+++SA ++DG Sbjct: 36 FETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARP-HKVDG 94 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 95 RVVEPKRAVSR 105 Score = 35.4 bits (80), Expect = 0.093 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F +G++ ++ DR++G+ RGF FVT + +D + Sbjct: 130 EEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G + + ++ D T RSRGFGFVT A+ E++D+A++A ++DG Sbjct: 22 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP-HKVDG 80 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 81 RVVEPKRAVSR 91 Score = 35.4 bits (80), Expect = 0.093 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L ++F E+G + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L Sbjct: 211 DDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVL 269 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 270 YVGRAQKKIER 280 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL Sbjct: 315 DEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLH 372 Query: 325 VNVAAER 305 V + R Sbjct: 373 VTLGQAR 379
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L ++F E+G + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L Sbjct: 211 DDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVL 269 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 270 YVGRAQKKIER 280 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL Sbjct: 315 DEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLH 372 Query: 325 VNVAAER 305 V + R Sbjct: 373 VTLGQAR 379
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L ++F E+G + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L Sbjct: 211 DDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVL 269 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 270 YVGRAQKKIER 280 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL Sbjct: 315 DEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLH 372 Query: 325 VNVAAER 305 V + R Sbjct: 373 VTLGQAR 379
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L ++F E+G + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L Sbjct: 211 DDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVL 269 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 270 YVGRAQKKIER 280 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL Sbjct: 315 DEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLH 372 Query: 325 VNVAAER 305 V + R Sbjct: 373 VTLGQAR 379
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L ++F E+G + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L Sbjct: 211 DDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVL 269 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 270 YVGRAQKKIER 280 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL Sbjct: 315 DEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLH 372 Query: 325 VNVAAER 305 V + R Sbjct: 373 VTLGQAR 379
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D +L ++F E+G + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L Sbjct: 211 DDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVL 269 Query: 328 RVNVAAERPQR 296 V A ++ +R Sbjct: 270 YVGRAQKKIER 280 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL Sbjct: 315 DEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLH 372 Query: 325 VNVAAER 305 V + R Sbjct: 373 VTLGQAR 379
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE--M 344 W L F++ GEVV+ TI D TGRSRGFGF+ +D S LD +E + Sbjct: 84 WDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF---KDSSSVEKVLDQKEHRL 140 Query: 343 DGR 335 DGR Sbjct: 141 DGR 143
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQ 350 W L FS+ GEVV+ T+ D TGRSRGFGFV E +D + L+G+ Sbjct: 106 WDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGK 165 Query: 349 EMDGRPLRVNVAAERPQRGF*CGAAAES 266 +D + + E ++ F G + ++ Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDT 193 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 386 + ++ + F GEV + + D +T + RGF F+T +E Sbjct: 195 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQ 350 W L FS+ GEVV+ T+ D TGRSRGFGFV E +D + L+G+ Sbjct: 106 WDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGK 165 Query: 349 EMDGRPLRVNVAAERPQRGF*CGAAAES 266 +D + + E ++ F G + ++ Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDT 193 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 386 + ++ + F GEV + + D +T + RGF F+T +E Sbjct: 195 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G + + ++ D T RSRGFGFVT A+ E++D+A++A ++DG Sbjct: 22 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP-HKVDG 80 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 81 RVVEPKRAVSR 91 Score = 35.4 bits (80), Expect = 0.093 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 46.6 bits (109), Expect = 4e-05 Identities = 18/76 (23%), Positives = 44/76 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + +S+L + F +G + +++D+E+G+ +G+ F+ + D+ +A DG+++D Sbjct: 111 YDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDS 170 Query: 337 RPLRVNVAAERPQRGF 290 + + V+V R +G+ Sbjct: 171 KRVLVDVERARTVKGW 186
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/70 (32%), Positives = 40/70 (57%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 + L + FS+ G + + ++ D E G+S+GFGFV ++ E+ A+ GQ G+PL Sbjct: 317 EEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLY 375 Query: 325 VNVAAERPQR 296 V +A ++ R Sbjct: 376 VAIAQKKEDR 385 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/65 (24%), Positives = 32/65 (49%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L F+E + + + D +GRS +G+ S++D + AI + ++G+ +RV Sbjct: 40 LYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMW 99 Query: 316 AAERP 302 + P Sbjct: 100 SVRAP 104 Score = 32.3 bits (72), Expect = 0.79 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L MF + G +V+ + E G+SRG+GFV ++ +AI L+ + + + V Sbjct: 128 LQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGK 186 Query: 316 AAERPQR 296 ++ R Sbjct: 187 FMKKTDR 193
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RP 332 D L ++F ++G +V I+ D+ TG+ RG FV +E+ AISAL+ +G +P Sbjct: 184 DDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQP 243 Query: 331 LRVNVAAE 308 L V +A E Sbjct: 244 LTVRLAEE 251
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G + + ++ D T RSRGFGFVT A+ E++D+A++A ++DG Sbjct: 22 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP-HKVDG 80 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 81 RVVEPKRAVSR 91 Score = 35.4 bits (80), Expect = 0.093 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G + + ++ D T RSRGFGFVT A+ E++D+A++A ++DG Sbjct: 22 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP-HKVDG 80 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 81 RVVEPKRAVSR 91 Score = 35.4 bits (80), Expect = 0.093 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RP 332 D +L +F ++G +V I+ D+ TGR RG FV +E+ AISAL+ +G +P Sbjct: 226 DDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQP 285 Query: 331 LRVNVAAE 308 L V +A E Sbjct: 286 LSVRLAQE 293
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RP 332 D +L +F ++G +V I+ D+ TGR RG FV +E+ AISAL+ +G +P Sbjct: 224 DDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQP 283 Query: 331 LRVNVAAE 308 L V +A E Sbjct: 284 LSVRLAEE 291
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE--M 344 W L F++ GEVV+ TI D TGRSRGFGF+ +D S LD +E + Sbjct: 77 WDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF---KDAASVEKVLDQKEHRL 133 Query: 343 DGR 335 DGR Sbjct: 134 DGR 136
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Frame = -1 Query: 508 EDSRLVQMF-SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 EDS L F S + +A I+ D TG SR +GFV +S+++ A+ + G GRP Sbjct: 194 EDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRP 253 Query: 331 LRVNVAAER 305 LR++VA+ + Sbjct: 254 LRISVASPK 262
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 45.8 bits (107), Expect = 7e-05 Identities = 26/73 (35%), Positives = 39/73 (53%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + +D L F G++ + I D ET + RGF FV ED +AI ++ E+ GR Sbjct: 16 EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGR 75 Query: 334 PLRVNVAAERPQR 296 +RVN+A +P R Sbjct: 76 TIRVNLA--KPMR 86
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 45.8 bits (107), Expect = 7e-05 Identities = 26/73 (35%), Positives = 39/73 (53%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + +D L F G++ + I D ET + RGF FV ED +AI ++ E+ GR Sbjct: 16 EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGR 75 Query: 334 PLRVNVAAERPQR 296 +RVN+A +P R Sbjct: 76 TIRVNLA--KPMR 86
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +FS++G+VV A +V + + +R +GFVTM++ ++ IS L E+ GR + V Sbjct: 423 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEK 482 Query: 316 AAERP 302 A P Sbjct: 483 AKNEP 487
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = -1 Query: 466 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 290 V + +V D T RSRGFG+V + + L +A+ AL G+++ GRP+R+ VA P+R F Sbjct: 118 VTSIRLVIDPLTERSRGFGYVEFETADTLSAAL-ALSGEDLMGRPVRITVA--EPRRSF 173
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 45.4 bits (106), Expect = 9e-05 Identities = 25/71 (35%), Positives = 40/71 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G + + ++ D T RSRGFGFVT A+ E +D+A++A ++DG Sbjct: 22 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNARP-HKVDG 80 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 81 RVVEPKRAVSR 91 Score = 34.7 bits (78), Expect = 0.16 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ I+ DR +G+ RGF FVT +D + Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 162
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 45.4 bits (106), Expect = 9e-05 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQ 350 W L FS+ G+VV+ T+ D TGRSRGFGFV E +D + L+G+ Sbjct: 104 WDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGK 163 Query: 349 EMDGRPLRVNVAAERPQRGF*CGAAAES 266 +D + + E ++ F G + ++ Sbjct: 164 VIDPKRAKAMKTKEPVKKIFVGGLSPDT 191 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 386 + ++ + F GEV + + D +T + RGF F+T +E Sbjct: 193 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 232
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 45.4 bits (106), Expect = 9e-05 Identities = 25/71 (35%), Positives = 34/71 (47%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 WQ L FS+ GE+ ++ D T RSRGFGFVT A +D + E+D Sbjct: 30 WQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ-PHHELDS 88 Query: 337 RPLRVNVAAER 305 + + VA R Sbjct: 89 KTIDPKVAFPR 99 Score = 38.5 bits (88), Expect = 0.011 Identities = 18/52 (34%), Positives = 31/52 (59%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 Q F + G+V +A +++D+ T R RGFGFVT ED+ + + E++ + Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTF-ENEDVVEKVCEIHFHEINNK 178
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 4/59 (6%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQEMD 341 D + + +S+ GE+ + ++ D T RSRGFGFVT + K ++D+A+ +DG+ +D Sbjct: 36 DDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 94 Score = 38.9 bits (89), Expect = 0.008 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 + L + F+++G V + I+ D+ T + RGFGFVT + +D + Sbjct: 127 EDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 45.4 bits (106), Expect = 9e-05 Identities = 25/71 (35%), Positives = 34/71 (47%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 WQ L FS+ GE+ ++ D T RSRGFGFVT A +D + E+D Sbjct: 30 WQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ-PHHELDS 88 Query: 337 RPLRVNVAAER 305 + + VA R Sbjct: 89 KTIDPKVAFPR 99 Score = 38.5 bits (88), Expect = 0.011 Identities = 18/52 (34%), Positives = 31/52 (59%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 Q F + G+V +A +++D+ T R RGFGFVT ED+ + + E++ + Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTF-ENEDVVEKVCEIHFHEINNK 178
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 45.4 bits (106), Expect = 9e-05 Identities = 27/67 (40%), Positives = 38/67 (56%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L MF + G V + I+++ E G S+GFGFVTM +D + A L G ++GR + Sbjct: 166 DPDLKTMFEKFGVVSDVEIIFN-ERG-SKGFGFVTMERPQDAERARQELHGSMIEGRKIE 223 Query: 325 VNVAAER 305 VN A R Sbjct: 224 VNCATAR 230
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 45.1 bits (105), Expect = 1e-04 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L + F + G + + ++ D +T RSRGFGFVT + E++D+A+ A ++DG Sbjct: 44 FETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARP-HKVDG 102 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 103 RVVEPKRAVSR 113 Score = 36.6 bits (83), Expect = 0.042 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ ++ DR++G+ RGF FVT + +D + Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 45.1 bits (105), Expect = 1e-04 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L + F + G + + ++ D +T RSRGFGFVT + E++D+A+ A ++DG Sbjct: 44 FETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARP-HKVDG 102 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 103 RVVEPKRAVSR 113 Score = 36.6 bits (83), Expect = 0.042 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ ++ DR++G+ RGF FVT + +D + Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 45.1 bits (105), Expect = 1e-04 Identities = 19/71 (26%), Positives = 40/71 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 +++ +S++ + F +G + +V D+ T + +G+ F+ D+ +A DGQ++DG Sbjct: 147 YESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDG 206 Query: 337 RPLRVNVAAER 305 R + V+V R Sbjct: 207 RRVLVDVERGR 217
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 45.1 bits (105), Expect = 1e-04 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L + F + G + + ++ D +T RSRGFGFVT + E++D+A+ A ++DG Sbjct: 44 FETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARP-HKVDG 102 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 103 RVVEPKRAVSR 113 Score = 36.6 bits (83), Expect = 0.042 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F ++G++ ++ DR++G+ RGF FVT + +D + Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/64 (28%), Positives = 36/64 (56%) Frame = -1 Query: 487 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 308 +FS++G +++ ++YD+ G G+GF++ I L+G+ ++G L +N E Sbjct: 214 LFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINYHVE 273 Query: 307 RPQR 296 R +R Sbjct: 274 RKER 277 Score = 30.0 bits (66), Expect = 3.9 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 20/91 (21%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVY-------------------DRETGRSRGFGFVTMA 395 W ED L + GE+++ ++ D G SRG+GFV+ Sbjct: 551 WTDED--LYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGFVSFE 608 Query: 394 SKEDLDSAISALDGQEMD-GRPLRVNVAAER 305 S D AI DG ++ + L V+ A +R Sbjct: 609 SPLDAAKAILNTDGYQVSKDQVLSVSFAQKR 639
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 45.1 bits (105), Expect = 1e-04 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RP 332 D +L +F ++G +V I+ D+ TG+ RG FV +E+ AISAL+ +G +P Sbjct: 209 DDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQP 268 Query: 331 LRVNVAAE 308 L V +A E Sbjct: 269 LTVRLAEE 276
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 WQ L + F + GEV ++ D T RSRGFGFVT + +D + A E+D Sbjct: 29 WQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-AQSRHELDS 87 Query: 337 RPLRVNVAAER 305 + + VA R Sbjct: 88 KTIDPKVAFPR 98 Score = 38.1 bits (87), Expect = 0.014 Identities = 18/50 (36%), Positives = 31/50 (62%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 F + G+V +A +++D+ T R RGFGFVT S ED+ + + E++ + Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFES-EDIVEKVCEIHFHEINNK 177
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 WQ L + F + GEV ++ D T RSRGFGFVT + +D + A E+D Sbjct: 29 WQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-AQSRHELDS 87 Query: 337 RPLRVNVAAER 305 + + VA R Sbjct: 88 KTIDPKVAFPR 98 Score = 38.1 bits (87), Expect = 0.014 Identities = 18/50 (36%), Positives = 31/50 (62%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 F + G+V +A +++D+ T R RGFGFVT S ED+ + + E++ + Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFES-EDIVEKVCEIHFHEINNK 177
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 WQ L + F + GEV ++ D T RSRGFGFVT + +D + A E+D Sbjct: 29 WQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-AQSRHELDS 87 Query: 337 RPLRVNVAAER 305 + + VA R Sbjct: 88 KTIDPKVAFPR 98 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/52 (36%), Positives = 32/52 (61%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 Q F + G+V +A +++D+ T R RGFGFVT S ED+ + + E++ + Sbjct: 127 QYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFES-EDIVEKVCEIHFHEINNK 177
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D +L FS + +A +V D RSRGFGFV+ A ++D A++ + +G LR Sbjct: 39 DEQLADFFSNFAPIKHAVVVKDTNK-RSRGFGFVSFAVEDDTKEALAKARKTKFNGHILR 97 Query: 325 VNVAAER 305 V++A R Sbjct: 98 VDIAKRR 104 Score = 39.3 bits (90), Expect = 0.006 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -1 Query: 517 WQAEDS-RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 341 W D +L ++F +G VV ATI R+ G+ GF FVTM + A+ ++D Sbjct: 156 WSCRDPVKLKKIFGRYGTVVEATIPRKRD-GKLCGFAFVTMKKISNCRIALENTKDLKID 214 Query: 340 GRPLRVNVAAER 305 GR + V+ A ++ Sbjct: 215 GRKVAVDFAVQK 226
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Frame = -1 Query: 505 DSRLVQMF-SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +S+L ++F + + +A IV+D+ TG S+G+GFV + ++ A+S + G ++GR + Sbjct: 176 ESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAI 235 Query: 328 RVNVAAERPQ 299 +V + + Q Sbjct: 236 KVGPTSGQQQ 245
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A + +FS++G + I D TG+S+GF +V KED A +LD Q G Sbjct: 319 YEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQG 378 Query: 337 RPLRV 323 R L + Sbjct: 379 RLLHI 383 Score = 37.4 bits (85), Expect = 0.025 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 S GFGFV +KE + AIS LDG +DG L++ ++ Sbjct: 662 SMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLS 698 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/73 (24%), Positives = 39/73 (53%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++A L+++F G++ + + + +RGF FV ++ ++A+S L+G + G Sbjct: 726 FEATRKDLLELFGAFGQLKSVRVPKKFDQS-ARGFAFVEFNLMKEAETAMSQLEGVHLLG 784 Query: 337 RPLRVNVAAERPQ 299 R L + A + P+ Sbjct: 785 RRLVMQYAEQDPE 797
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA---LDGQE 347 W + L + F ++G V + I+ D TGRSRGFGF++ +D + LDG+ Sbjct: 168 WDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKV 227 Query: 346 MD 341 +D Sbjct: 228 ID 229 Score = 43.1 bits (100), Expect = 4e-04 Identities = 17/38 (44%), Positives = 29/38 (76%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLD 377 + FS+ G +++A ++ D++TG+SRGFGFVT S + +D Sbjct: 261 EFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVD 298
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRET---GRSRGFGFVTMASKEDLDSAISALDGQE 347 + +S+L + F +G + IVY++ + G+ RG+ F+ + D+ SA DG++ Sbjct: 112 YDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKK 171 Query: 346 MDGRPLRVNVAAERPQRGF 290 +DGR + V+V R +G+ Sbjct: 172 IDGRRVLVDVERGRTVKGW 190
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/71 (32%), Positives = 41/71 (57%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L + F + G + + ++ D + RSRGFGFVT S +++D+A++A ++DG Sbjct: 23 FETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARP-HKVDG 81 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 82 RVVEPKRAVSR 92 Score = 37.0 bits (84), Expect = 0.032 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L + F ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 117 EEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163
>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) Length = 915 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/65 (33%), Positives = 38/65 (58%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +FS++G+VV A +V + + +R +GFVTM++ E+ I+ L E+ G+ + V Sbjct: 422 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEK 481 Query: 316 AAERP 302 A P Sbjct: 482 AKNEP 486
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/83 (28%), Positives = 41/83 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 W+ + L F ++GE+ + + D +TGRSRGF F+ + E +D +SA D ++ Sbjct: 65 WETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK-VSAADEHIINS 123 Query: 337 RPLRVNVAAERPQRGF*CGAAAE 269 + + A R + F G E Sbjct: 124 KKVDPKKAKARHGKIFVGGLTTE 146 Score = 33.1 bits (74), Expect = 0.46 Identities = 15/72 (20%), Positives = 36/72 (50%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + D + F + G +V + +D++ + +GF F+T S++ + + Q++ G+ Sbjct: 146 EISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT-PKQKIAGK 204 Query: 334 PLRVNVAAERPQ 299 + V A +P+ Sbjct: 205 EVDVKRATPKPE 216
>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) Length = 174 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/65 (29%), Positives = 39/65 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 +A + + F+E+GE+ N + DR TG +G+ V + ++ +A+ L+GQ++ G+ Sbjct: 83 EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 142 Query: 334 PLRVN 320 P+ V+ Sbjct: 143 PISVD 147
>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) (RNA-binding protein Y14) (Binder of OVCA1-1) (BOV-1) Length = 174 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/65 (29%), Positives = 39/65 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 +A + + F+E+GE+ N + DR TG +G+ V + ++ +A+ L+GQ++ G+ Sbjct: 83 EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 142 Query: 334 PLRVN 320 P+ V+ Sbjct: 143 PISVD 147
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L +FS +G+VV A +V + + +R +GFVTM++ E+ I+ L E+ G+ + V Sbjct: 444 LKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEK 503 Query: 316 AAERP 302 A P Sbjct: 504 AKSEP 508
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 43.9 bits (102), Expect = 3e-04 Identities = 20/74 (27%), Positives = 37/74 (50%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + ++ ++F++ G V +V D ETG +G+GF E A+ L+ E+ Sbjct: 16 YDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNNSELGP 75 Query: 337 RPLRVNVAAERPQR 296 R +RV + P+R Sbjct: 76 RKIRVEFPSNDPRR 89
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/67 (28%), Positives = 37/67 (55%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + + L +F +HG + ++ DR T +SRGF F+T + D +A ++G+ + G+ Sbjct: 18 ETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGK 76 Query: 334 PLRVNVA 314 ++V A Sbjct: 77 AIKVEQA 83
>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I| Length = 219 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/64 (35%), Positives = 37/64 (57%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L Q FSE+ +V +V DRE G++RGFGFV+ + A +G+ + RP++ Sbjct: 43 DESLYQAFSEYPSLVKTKVVRDRE-GKTRGFGFVSFKDSDQFLKAWREKNGKYIGSRPVK 101 Query: 325 VNVA 314 ++ A Sbjct: 102 LSRA 105
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 43.5 bits (101), Expect = 3e-04 Identities = 21/59 (35%), Positives = 33/59 (55%) Frame = -1 Query: 481 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 S + +A I+ D +T SRG+GFV + D SA++ + GQ RP+RV +A + Sbjct: 208 SRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPK 266
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/63 (33%), Positives = 38/63 (60%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L+QMF G VV+A + D++T S+ FGFV+ + +AI +++G ++ + L+ Sbjct: 414 DQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 473 Query: 325 VNV 317 V + Sbjct: 474 VQL 476
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/63 (33%), Positives = 38/63 (60%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L+QMF G VV+A + D++T S+ FGFV+ + +AI +++G ++ + L+ Sbjct: 414 DQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 473 Query: 325 VNV 317 V + Sbjct: 474 VQL 476
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/57 (35%), Positives = 34/57 (59%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 ++F+++G + +V D +T RSRGF F+ D +A + G E+DGR +RV+ Sbjct: 115 ELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVD 171
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + L + + G++ + ++ D + RSRGFGFVT +S ++D+A++A +DG Sbjct: 18 FETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP-HSIDG 76 Query: 337 RPLRVNVAAERPQRG 293 R + A R + G Sbjct: 77 RVVEPKRAVAREESG 91 Score = 41.6 bits (96), Expect = 0.001 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 112 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + L + + G++ + ++ D + RSRGFGFVT +S ++D+A++A +DG Sbjct: 30 FETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP-HSIDG 88 Query: 337 RPLRVNVAAERPQRG 293 R + A R + G Sbjct: 89 RVVEPKRAVAREESG 103 Score = 41.6 bits (96), Expect = 0.001 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L F E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 124 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 42.7 bits (99), Expect = 6e-04 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 311 ++FS +GE+ + D TG S+GF +V A E+ A LD Q GR L + A Sbjct: 343 KLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELDKQIFQGRLLHILAAD 402 Query: 310 E 308 E Sbjct: 403 E 403 Score = 36.2 bits (82), Expect = 0.055 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 293 S GFGFV +KE + ISA+DG +DG +++ ++ + G Sbjct: 685 SMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQGNAG 728
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 42.7 bits (99), Expect = 6e-04 Identities = 18/60 (30%), Positives = 36/60 (60%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 + +++ + S G V+N +++D +TGRS+G+ F+ E SA+ L+G ++ R L+ Sbjct: 31 EEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSRFLK 90
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 42.7 bits (99), Expect = 6e-04 Identities = 20/67 (29%), Positives = 38/67 (56%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 ++ +FSE+G V+ + D TG S+GF ++ + A+ L+G ++ GR L+++ Sbjct: 47 ILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDH 106 Query: 316 AAERPQR 296 RP+R Sbjct: 107 TFYRPKR 113
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 42.4 bits (98), Expect = 8e-04 Identities = 24/61 (39%), Positives = 36/61 (59%) Frame = -1 Query: 499 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 +L ++FS G VV A I+ D++ G+SRG G VT + AIS +GQ + RP+ V Sbjct: 217 KLKEVFSMAGVVVRADILEDKD-GKSRGIGIVTFEQSIEAVQAISMFNGQLLFDRPMHVK 275 Query: 319 V 317 + Sbjct: 276 M 276 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -1 Query: 472 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 GEV ++ D E G+SRG V +E + A L+ + GRPL+V Sbjct: 94 GEVTYVELLMDAE-GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV 142
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 42.4 bits (98), Expect = 8e-04 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G +V+ ++ D +T RSRGFGF+T + +D+A +A ++DG Sbjct: 33 YRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARP-HKIDG 91 Query: 337 RPLRVNVAAERPQ 299 R + A R + Sbjct: 92 RTVEPKRAVPRQE 104 Score = 38.1 bits (87), Expect = 0.014 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 ++ L + F + G++V+ IV D++TG+ RGF F+ + +D I Sbjct: 127 DEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 42.4 bits (98), Expect = 8e-04 Identities = 16/47 (34%), Positives = 30/47 (63%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L + F E+G++ + I+ D+++G+ RGFGFVT + +D + Sbjct: 112 EEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/73 (28%), Positives = 40/73 (54%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + L + + G++ + ++ D + RSRGFGFVT + ++D+A+SA +DG Sbjct: 18 FETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSARP-HTIDG 76 Query: 337 RPLRVNVAAERPQ 299 R + A R + Sbjct: 77 RVVEPKRAVAREE 89
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/65 (32%), Positives = 32/65 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A + Q+FS +GE+ + D TG+S+GF +V E +A LD Q G Sbjct: 310 YDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELDKQIFQG 369 Query: 337 RPLRV 323 R L + Sbjct: 370 RLLHI 374 Score = 34.7 bits (78), Expect = 0.16 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 S GFGF+ +KE + I+A+DG +DG +++ ++ Sbjct: 657 SMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKIS 693
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/57 (35%), Positives = 32/57 (56%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 F G++ + + D E+ R RGF F+ ED +AI ++ E+ GR +RVN+A Sbjct: 26 FIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSELCGRTIRVNLA 82
>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein| 11) Length = 281 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/58 (37%), Positives = 33/58 (56%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 L ++F + G + TI DRE G+ + FGFV E + AI+ L+G + GRP+ V Sbjct: 26 LYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINV 82
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 311 ++F ++G VV IV R +GFV + D+ AI L+G+ +DG+PL+V V+ Sbjct: 104 ELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVST 155 Query: 310 ER---------PQRGF*CG 281 R P++ + CG Sbjct: 156 SRVRPKPGMGDPEQCYRCG 174
>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)| Length = 165 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/65 (29%), Positives = 39/65 (60%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 +A++ + + F ++GE+ N + DR TG S+G+ V + + +A AL+G E+ G+ Sbjct: 83 EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQ 142 Query: 334 PLRVN 320 ++V+ Sbjct: 143 TIQVD 147
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 350 A + + F +HG V+ ++ D+ TG+ +G FV A+ +D D AI AL Q Sbjct: 131 ATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQ 184 Score = 35.8 bits (81), Expect = 0.071 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG-QEMDG 338 QA + + ++F + G V + ++ D E +SRG GFV +SKE +AI L+G M G Sbjct: 221 QATEKEVEEIFLQFGHVEDVYLMRD-EYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRG 279 Query: 337 --RPLRVNVA-AERPQRG 293 +PL V A +RP+ G Sbjct: 280 CNQPLIVRFAEPKRPKPG 297
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/61 (39%), Positives = 36/61 (59%) Frame = -1 Query: 499 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 +L ++FS G VV A I+ D++ G+SRG G VT + AIS +GQ + RP+ V Sbjct: 218 KLKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVK 276 Query: 319 V 317 + Sbjct: 277 M 277 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -1 Query: 472 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 GEV ++ D E G+SRG V +E + A L+ + GRPL+V Sbjct: 95 GEVTYVELLMDAE-GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV 143
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/61 (39%), Positives = 36/61 (59%) Frame = -1 Query: 499 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 +L ++FS G VV A I+ D++ G+SRG G VT + AIS +GQ + RP+ V Sbjct: 178 KLKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVK 236 Query: 319 V 317 + Sbjct: 237 M 237 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -1 Query: 472 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 GEV ++ D E G+SRG V +E + A L+ + GRPL+V Sbjct: 94 GEVTYVELLMDAE-GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV 142
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/57 (36%), Positives = 32/57 (56%) Frame = -1 Query: 490 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 ++F++ G + +V D T RSRGF F+ + D A A G E+DGR +RV+ Sbjct: 123 ELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGMEVDGRRIRVD 179
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ +S L + FS++G V IV DR G S+G+GFVT ++ED + + Sbjct: 42 FKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKD 100 Query: 337 RPLRVNVAAERPQRG 293 + L + A + Q G Sbjct: 101 KKLNIGPAIRKQQVG 115
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ +S L + FS++G V IV DR G S+G+GFVT ++ED + + Sbjct: 42 FKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKD 100 Query: 337 RPLRVNVAAERPQRG 293 + L + A + Q G Sbjct: 101 KKLNIGPAIRKQQVG 115
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/65 (38%), Positives = 36/65 (55%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 WQ+ L MF E G V+ A + D G SRGFG V +++++ AI +G E++G Sbjct: 232 WQS----LKDMFKECGHVLRADVELDFN-GFSRGFGSVIYPTEDEMIRAIDTFNGMEVEG 286 Query: 337 RPLRV 323 R L V Sbjct: 287 RVLEV 291 Score = 35.0 bits (79), Expect = 0.12 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 L ++F GEVV A I+ + G RG G V E + AIS DG R L V Sbjct: 138 LKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMV 193
>REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2| Length = 218 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D+ + ++F+E G + A + YDR +GRS G V + D A+ G +DGRP+ Sbjct: 88 DADIQELFAEFGTLKKAAVDYDR-SGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMD 146 Query: 325 VNVAAER--PQR 296 + + A + PQR Sbjct: 147 IQLVASQIDPQR 158
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D+ + ++F+E G + A + YDR +GRS G V K D A+ +G +DGRP+ Sbjct: 117 DADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN 175 Query: 325 VNVAAER 305 + + + Sbjct: 176 IQLVTSQ 182
>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)| (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) Length = 256 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D+ + ++F+E G + A + YDR +GRS G V K D A+ +G +DGRP+ Sbjct: 118 DADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN 176 Query: 325 VNVAAER 305 + + + Sbjct: 177 IQLVTSQ 183
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/65 (32%), Positives = 38/65 (58%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ E+S + + F + G ++ IV D+ TG +GFG+V + + + A+ L+ E+ G Sbjct: 296 YKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALK-LNNSELMG 354 Query: 337 RPLRV 323 R LRV Sbjct: 355 RKLRV 359
>IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 90 kDa subunit| (eIF3 p90) (Cell cycle regulation and translation initiation protein) Length = 763 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 341 L +FS+ G+VVN D TG+++GF FV S D I + G+ +D Sbjct: 99 LTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD 150
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 40.4 bits (93), Expect = 0.003 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ EDS L + F + G +V IV + TG RGFG+V + + + A+ L+ E+ G Sbjct: 300 YKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALK-LNNSELMG 358 Query: 337 RPLRV 323 R LRV Sbjct: 359 RKLRV 363
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ D L F + G +V+ ++ D T RSRGFGF+T + +D A + ++DG Sbjct: 40 YRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRP-HKIDG 98 Query: 337 RPLRVNVAAER 305 R + A R Sbjct: 99 RVVEPKRAVPR 109 Score = 37.4 bits (85), Expect = 0.025 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 ++ + F G +V+ IV D+ETG+ RGF FV + +D + Sbjct: 134 DEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVV 180
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 40.4 bits (93), Expect = 0.003 Identities = 20/65 (30%), Positives = 34/65 (52%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A + ++FS +GE+ I D TG+S+GF +V + ++ +A LD Q G Sbjct: 339 YTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQG 398 Query: 337 RPLRV 323 R L + Sbjct: 399 RLLHI 403 Score = 33.9 bits (76), Expect = 0.27 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 S GFGF +KE ++ ISA++G +DG L++ ++ Sbjct: 696 SMGFGFAEFKTKEQANAVISAMEGTILDGHKLQLKLS 732 Score = 28.9 bits (63), Expect = 8.7 Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIV--YDRETGRSRGFGFVTMASKEDLDSAISALDGQEM 344 ++A + ++FS G++ + + +D+ +RGF FV ++ ++A+ L G + Sbjct: 761 FEATRKDVFELFSSFGQLKSVRVPKKFDKS---ARGFAFVEFLLPKEAENAMDQLQGVHL 817 Query: 343 DGRPLRVNVAAERPQ 299 GR L + + P+ Sbjct: 818 LGRRLVMEFVEQDPE 832
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/70 (32%), Positives = 38/70 (54%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 Q +S L F G + + +V + +T RSR FGFVT ++ E+ D+A++A +DG Sbjct: 17 QTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA-SPHAVDGN 75 Query: 334 PLRVNVAAER 305 + + A R Sbjct: 76 TVELKRAVSR 85 Score = 39.7 bits (91), Expect = 0.005 Identities = 17/42 (40%), Positives = 27/42 (64%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 371 L++ FS+ G V A I+ D+++G+ RGFGFV + + D A Sbjct: 114 LIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155
>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding| subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 274 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/62 (33%), Positives = 35/62 (56%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 E+S ++ + ++V ++ETG+SRG FVT +S+E + A+ LDG+ L Sbjct: 204 ENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLIL 263 Query: 328 RV 323 RV Sbjct: 264 RV 265
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/75 (28%), Positives = 38/75 (50%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ ++ L + FS++G V IV DR G S+G+GF+T ++ED + + Sbjct: 42 FKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQEAEKLNYKD 100 Query: 337 RPLRVNVAAERPQRG 293 + L + A + Q G Sbjct: 101 KKLNIGPAIRKQQVG 115
>NELFE_DROME (P92204) Negative elongation factor E| Length = 280 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/66 (34%), Positives = 40/66 (60%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L + F+++G +VN ++ E +SRGF V+ A E D AI+ + G+ ++G L+V + Sbjct: 180 LKKTFNDYGTIVNVSM----EIEKSRGF--VSFAKPESADRAIAEIHGKNVNGINLQVQL 233 Query: 316 AAERPQ 299 A +PQ Sbjct: 234 ARRQPQ 239
>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) Length = 273 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/49 (46%), Positives = 29/49 (59%) Frame = -1 Query: 442 DRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 296 D +T + RGF FV ED SAI ++ E+ GR +RVNVA RP R Sbjct: 4 DYQTEKHRGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRVNVA--RPVR 50
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 39.3 bits (90), Expect = 0.006 Identities = 15/47 (31%), Positives = 29/47 (61%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 E+ L + F E+G++ + I+ D+++G+ RGF FVT + +D + Sbjct: 112 EEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIV 158 Score = 37.4 bits (85), Expect = 0.025 Identities = 20/73 (27%), Positives = 38/73 (52%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + L + + G + + ++ D + RSRGFGFVT + ++D+A+ A +DG Sbjct: 18 FETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAM-ATRPHTIDG 76 Query: 337 RPLRVNVAAERPQ 299 R + A R + Sbjct: 77 RVVEPKRAVAREE 89
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 39.3 bits (90), Expect = 0.006 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -1 Query: 514 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + + L +F + G V+ I D+ TG +GF FVT S++D AI+ L+ M Sbjct: 186 EMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHM 245 Query: 334 PLRV 323 L+V Sbjct: 246 VLKV 249
>NELFE_DROVI (Q95ZE9) Negative elongation factor E| Length = 281 Score = 39.3 bits (90), Expect = 0.006 Identities = 23/66 (34%), Positives = 39/66 (59%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L + F+++G +VN ++ E +SRGF V+ A E D AI+ + G+ + G L+V + Sbjct: 181 LKKTFNDYGTIVNVSM----EIEKSRGF--VSFAKPESADRAIAEMHGKSVTGIVLQVQL 234 Query: 316 AAERPQ 299 A +PQ Sbjct: 235 ARRQPQ 240
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 39.3 bits (90), Expect = 0.006 Identities = 19/65 (29%), Positives = 35/65 (53%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A++ Q+FS++GE+ + + +TG+ +GF V E+ +A A DG+ G Sbjct: 310 YTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQDGKIFQG 369 Query: 337 RPLRV 323 R L + Sbjct: 370 RLLHI 374 Score = 36.2 bits (82), Expect = 0.055 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 S GFGFV +SKE + A A+DG +DG L++ ++ Sbjct: 650 SMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKIS 686 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 SRGF F S ++ + A+SAL G + GR L + A Sbjct: 742 SRGFAFAEYVSAKEAEHAMSALQGTHLLGRRLVLQYA 778
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/55 (30%), Positives = 33/55 (60%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 F + G++ T++YDR TG +G+G++ S + A+ L+G E+ G+ + V+ Sbjct: 84 FKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQ-LNGGELKGKKIAVS 137
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 38.9 bits (89), Expect = 0.008 Identities = 21/65 (32%), Positives = 35/65 (53%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 +D L +F G + I+ D +TG S G+GFV S+ D AI+ L+G + + + Sbjct: 90 QDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRI 149 Query: 328 RVNVA 314 +V+ A Sbjct: 150 KVSFA 154
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 38.9 bits (89), Expect = 0.008 Identities = 22/70 (31%), Positives = 35/70 (50%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 + L + + G+VV+ ++ D T RSRGFGF+T +D A +DG+ + Sbjct: 45 EENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRA-QENRPHIIDGKTVE 103 Query: 325 VNVAAERPQR 296 A RP+R Sbjct: 104 AKRALPRPER 113 Score = 35.0 bits (79), Expect = 0.12 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 368 ++ L + F + G VV+ ++ D+ TG+ RGF FV + +D AI Sbjct: 135 DEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 38.5 bits (88), Expect = 0.011 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS---ALDGQE 347 W+ + L + FS GEV+ + D +TG S+GFGFV E +S +DG+ Sbjct: 113 WKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRW 172 Query: 346 MDGRPLRVNVAAERPQR 296 D + + + P R Sbjct: 173 CDCKLPNSKQSQDEPLR 189
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 38.5 bits (88), Expect = 0.011 Identities = 22/67 (32%), Positives = 36/67 (53%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 317 L F + G V +A IV D+ +GRS+G +V ++ + +AI AL G+ + G P+ V + Sbjct: 256 LYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI-ALSGKRLLGLPVIVQL 314 Query: 316 AAERPQR 296 R Sbjct: 315 TEAEKNR 321 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D + +F G++ + D + RS+GFG++ + +A+ ++G ++ GR +R Sbjct: 353 DEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMR 411 Query: 325 V 323 V Sbjct: 412 V 412
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 38.5 bits (88), Expect = 0.011 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = -1 Query: 511 AEDSR---LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 341 +ED+R L ++F G + + D+ TG+S+GF F++ +ED AI+ + G D Sbjct: 247 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 306 Query: 340 GRPLRVNVA 314 L V A Sbjct: 307 HLILNVEWA 315
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 38.5 bits (88), Expect = 0.011 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = -1 Query: 511 AEDSR---LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 341 +ED+R L ++F G + + D+ TG+S+GF F++ +ED AI+ + G D Sbjct: 247 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 306 Query: 340 GRPLRVNVA 314 L V A Sbjct: 307 HLILNVEWA 315
>RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protein Rox21)| Length = 197 Score = 38.1 bits (87), Expect = 0.014 Identities = 19/64 (29%), Positives = 36/64 (56%) Frame = -1 Query: 484 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 F+++G++ + I ++ GF FV ++D + A L+G E+ G LRV ++ R Sbjct: 27 FTKYGKLNSVWIAFNPP-----GFAFVEFEHRDDAEKACDILNGSELLGSQLRVEISKGR 81 Query: 304 PQRG 293 P++G Sbjct: 82 PRQG 85
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 329 ED R ++FS GE+ + D TG+S+GF +V ++ +A LD Q GR L Sbjct: 359 EDFR--KLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVELDKQIFQGRLL 416 Query: 328 RVNVAAER 305 + E+ Sbjct: 417 HILPGEEK 424 Score = 35.0 bits (79), Expect = 0.12 Identities = 14/37 (37%), Positives = 25/37 (67%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 S GFGFV +KE ++ I+A+DG +DG +++ ++ Sbjct: 708 SMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLS 744 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = -1 Query: 466 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 + + I+ DR G SR FGF+ ++ED A+ +G ++ + V++A Sbjct: 43 ITDVKILRDRN-GESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEVSMA 92
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 38.1 bits (87), Expect = 0.014 Identities = 19/71 (26%), Positives = 36/71 (50%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ ++S L +FS G++ + +D S+GF +V A + A LDG+ G Sbjct: 304 YETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNLDGKIFQG 363 Query: 337 RPLRVNVAAER 305 R L + A+++ Sbjct: 364 RLLHILPASQK 374 Score = 31.2 bits (69), Expect = 1.8 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIV--YDRETGRSRGFGFVTMASKEDLDSAISALDGQEM 344 +QA + +F +G++ + + +DR +RGFGF S + ++A+ AL + Sbjct: 706 FQATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAMDALKNTHL 762 Query: 343 DGRPLRVNVAAE 308 GR L + A E Sbjct: 763 LGRRLVLEFANE 774
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ ++S L + F + G +V IV + TG RGFG+V + + + A+ L+ E+ G Sbjct: 294 YRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALK-LNNSELMG 352 Query: 337 RPLRV 323 R LRV Sbjct: 353 RKLRV 357
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = -1 Query: 499 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 +L ++FS G V A I D++ G+SRG G VT + AIS +GQ + RP+ V Sbjct: 248 KLKEVFSIAGTVKRADIKEDKD-GKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVK 306 Query: 319 V 317 + Sbjct: 307 M 307 Score = 33.5 bits (75), Expect = 0.35 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -1 Query: 472 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 GEV + D E G+SRG G V +E + A+ ++ ++ GRPL + Sbjct: 125 GEVTYVELFKDAE-GKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNI 173
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = -1 Query: 499 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 320 +L ++FS G V A I D++ G+SRG G VT + AIS +GQ + RP+ V Sbjct: 239 KLKEVFSIAGTVKRADIKEDKD-GKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVK 297 Query: 319 V 317 + Sbjct: 298 M 298 Score = 33.5 bits (75), Expect = 0.35 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -1 Query: 472 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 323 GEV + D E G+SRG G V +E + A+ ++ ++ GRPL + Sbjct: 116 GEVTYVELFKDAE-GKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNI 164
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS---ALDGQE 347 W+ + L FS GEV+ + D +TG S+GFGFV E +S +DG+ Sbjct: 113 WKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRW 172 Query: 346 MDGRPLRVNVAAERPQR 296 D + + + P R Sbjct: 173 CDCKLPNSKQSPDEPLR 189
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 37.4 bits (85), Expect = 0.025 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -1 Query: 442 DRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 293 D ++GR F FV D + A+ A DG E DGR +RV RG Sbjct: 39 DIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRG 88
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 37.4 bits (85), Expect = 0.025 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + + + L ++FS++G + D T + +GF F+T E A S +DGQ G Sbjct: 411 YTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQG 470 Query: 337 RPLRV 323 R L V Sbjct: 471 RMLHV 475 Score = 34.7 bits (78), Expect = 0.16 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGR---SRGFGFVTMASKEDLDSAISALDGQEMDGR 335 + +L ++FS+ G V + +I + S GFGFV E A+ L G +DG Sbjct: 743 EEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGH 802 Query: 334 PLRVNVA 314 L V ++ Sbjct: 803 KLEVRIS 809 Score = 33.9 bits (76), Expect = 0.27 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRE-TGRSRGFGFVTMASKEDLDSAISAL 359 +QA + ++FS GE+ + TG RGFGFV +K+D A +AL Sbjct: 841 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 37.4 bits (85), Expect = 0.025 Identities = 20/69 (28%), Positives = 37/69 (53%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A +L ++FS+ G V +V ++ + RGFG+VT + ED+ A+ + +G Sbjct: 14 ARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI--TTFEGCK 71 Query: 331 LRVNVAAER 305 + V VA ++ Sbjct: 72 INVTVAKKK 80 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD------ 356 + +E+ L ++ + GE+ IV +T S+G F ++E + A Sbjct: 343 FDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAG 402 Query: 355 GQEMDGRPLRVNVAAERPQ 299 G ++DGR L+V++A R + Sbjct: 403 GLKLDGRQLKVDLAVTRDE 421 Score = 32.7 bits (73), Expect = 0.60 Identities = 18/71 (25%), Positives = 37/71 (52%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 ++ + L +F++ G V+ I + G+ RGFGFV + + A+ ++ +E+ G Sbjct: 122 FKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKG 180 Query: 337 RPLRVNVAAER 305 R + V+ A + Sbjct: 181 RTVAVDWAVAK 191
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 37.4 bits (85), Expect = 0.025 Identities = 20/48 (41%), Positives = 27/48 (56%) Frame = -1 Query: 496 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG 353 L + FS+ G+VV A I+ R G RG G V + +D+D AI DG Sbjct: 152 LTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQYDG 197
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 37.4 bits (85), Expect = 0.025 Identities = 17/65 (26%), Positives = 32/65 (49%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 338 + A +S L +FS+ G++ + +D + S+GF +V + A LDG+ G Sbjct: 310 YDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQG 369 Query: 337 RPLRV 323 R + + Sbjct: 370 RLMHI 374 Score = 31.6 bits (70), Expect = 1.3 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 424 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 314 S GFGFV +K +A++A+DG ++D L V + Sbjct: 642 SMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRAS 678 Score = 31.2 bits (69), Expect = 1.8 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Frame = -1 Query: 517 WQAEDSRLVQMFSEHGEVVNATIV--YDRETGRSRGFGFVTMASKEDLDSAISALDGQEM 344 +QA + +F +G++ + + +DR +RGFGF S + ++A+ AL + Sbjct: 711 FQATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAMDALKNTHL 767 Query: 343 DGRPLRVNVAAE 308 GR L + A E Sbjct: 768 LGRRLVLEFANE 779
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 37.0 bits (84), Expect = 0.032 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 5/119 (4%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM-DGRPL 329 + LV +F + G + + ++ D TG +RG+ FVT +KE A+ + E+ G+ + Sbjct: 175 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHI 234 Query: 328 RVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQK----TEACHHLKLPH*PPD 164 V C + A + + S T E +L++ TE + L H P D Sbjct: 235 GV------------CISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDD 281
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 37.0 bits (84), Expect = 0.032 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 5/119 (4%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM-DGRPL 329 + LV +F + G + + ++ D TG +RG+ FVT +KE A+ + E+ G+ + Sbjct: 175 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHI 234 Query: 328 RVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQK----TEACHHLKLPH*PPD 164 V C + A + + S T E +L++ TE + L H P D Sbjct: 235 GV------------CISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDD 281
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 37.0 bits (84), Expect = 0.032 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISAL 359 D LV++ +G++V+ + D+ T + +G+GFV S A+SAL Sbjct: 75 DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSAL 123 Score = 33.5 bits (75), Expect = 0.35 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 350 ++ L M G+V++ I+ D +G SRG GF M S E ++ I +G+ Sbjct: 153 DEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 37.0 bits (84), Expect = 0.032 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 5/119 (4%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM-DGRPL 329 + LV +F + G + + ++ D TG +RG+ FVT +KE A+ + E+ G+ + Sbjct: 85 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHI 144 Query: 328 RVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQK----TEACHHLKLPH*PPD 164 V C + A + + S T E +L++ TE + L H P D Sbjct: 145 GV------------CISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDD 191
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 37.0 bits (84), Expect = 0.032 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Frame = -1 Query: 502 SRLVQMFSEHGEVVNATIVYDRETGRSR----GFGFVTMASKEDLDSAISALDGQEMDGR 335 S + +F G V TI + R +R G FVT ++ED+D AI L+G+ +D R Sbjct: 58 SEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKAIETLNGKTLDDR 117 Query: 334 PLRVNVA 314 + V A Sbjct: 118 EIVVQKA 124 Score = 34.7 bits (78), Expect = 0.16 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -1 Query: 436 ETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 296 E R RGFGFV+ A+ ED AI ++G+++ L V A R + Sbjct: 253 EQRRGRGFGFVSFANAEDQSRAIEEMNGKQVGDLTLVVKSAVFREDK 299
>U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 auxiliary factor| 59 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF59) Length = 517 Score = 37.0 bits (84), Expect = 0.032 Identities = 17/64 (26%), Positives = 34/64 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 + ++V++ G++++ ++ + G S+GF F + D + AIS LDG++ G L Sbjct: 323 EDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGLDGKDTYGNKLH 382 Query: 325 VNVA 314 A Sbjct: 383 AQFA 386
>YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 intergenic| region Length = 403 Score = 37.0 bits (84), Expect = 0.032 Identities = 17/70 (24%), Positives = 36/70 (51%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 D L + F G++V + ++G+ +GF F+ ++E + + +++ GRPLR Sbjct: 252 DDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKSCRKIAGRPLR 311 Query: 325 VNVAAERPQR 296 + +R +R Sbjct: 312 MEYGEDRSKR 321
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 37.0 bits (84), Expect = 0.032 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISAL 359 D LV++ +G++V+ + D+ T + +G+GFV S A+SAL Sbjct: 75 DQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123 Score = 33.1 bits (74), Expect = 0.46 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -1 Query: 508 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 350 ++ L M G+V++ ++ D +G SRG GF M S E ++ I +G+ Sbjct: 153 DEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHFNGK 204
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 36.6 bits (83), Expect = 0.042 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -1 Query: 442 DRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 DRETG+ +G V+ +AI DG+E G P++V+ A R Sbjct: 320 DRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR 365
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 36.6 bits (83), Expect = 0.042 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -1 Query: 442 DRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 DRETG+ +G V+ +AI DG+E G P++V+ A R Sbjct: 313 DRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR 358
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 36.6 bits (83), Expect = 0.042 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -1 Query: 442 DRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 305 DRETG+ +G V+ +AI DG+E G P++V+ A R Sbjct: 327 DRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRR 372
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 36.6 bits (83), Expect = 0.042 Identities = 20/69 (28%), Positives = 37/69 (53%) Frame = -1 Query: 511 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 332 A +L ++FS+ G V +V ++ + RGFG+VT + ED+ A+ + +G Sbjct: 14 ARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI--TTFEGCK 71 Query: 331 LRVNVAAER 305 + V VA ++ Sbjct: 72 IDVTVAKKK 80
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 36.6 bits (83), Expect = 0.042 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM 344 + LV +F + G + + ++ D +G++RG+ F+T KE A+ D E+ Sbjct: 178 EDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEI 231
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 36.2 bits (82), Expect = 0.055 Identities = 17/63 (26%), Positives = 35/63 (55%) Frame = -1 Query: 505 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 326 + L + F++ G++ + +++TG SR +GF+ +KED A +++ + G L+ Sbjct: 104 EKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQ 163 Query: 325 VNV 317 V V Sbjct: 164 VRV 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,279,070 Number of Sequences: 219361 Number of extensions: 1570572 Number of successful extensions: 5086 Number of sequences better than 10.0: 338 Number of HSP's better than 10.0 without gapping: 4711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5079 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
