ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31... 825 0.0
2ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-33
3ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-33
4ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group... 151 3e-33
5dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
6dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
7dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
8gb|AY108263.1| Zea mays PCO100700 mRNA sequence 135 2e-28
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
10dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
11dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
12dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
13dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
15dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
16emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein 92 2e-15
17gb|AY111861.1| Zea mays CL2457_1 mRNA sequence 92 2e-15
18gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) 84 5e-13
19gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence 70 8e-09
20emb|X57079.1|NSCHRIB N.sylvestris DNA for 31kD chloroplast ribon... 60 8e-06
21emb|X53942.1|NSRNP31 Tobacco mRNA for 31 kDa chloroplast ribonuc... 60 8e-06
22emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31... 60 8e-06
23emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMW... 56 1e-04
24ref|NM_129093.2| Arabidopsis thaliana RNA binding / nucleic acid... 50 0.007
25gb|BT000365.1| Arabidopsis thaliana putative chloroplast RNA bin... 50 0.007
26gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 ma... 50 0.007
27gb|AY042799.1| Arabidopsis thaliana putative chloroplast RNA bin... 50 0.007
28dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds 44 0.45
29ref|NM_112902.2| Arabidopsis thaliana CYP705A20; heme binding / ... 42 1.8
30ref|XM_464698.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
31ref|XM_464699.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
32gb|BT006102.1| Arabidopsis thaliana clone U51190 putative cytoch... 42 1.8
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
34gb|AC013410.5| Homo sapiens BAC clone RP11-495I2 from 2, complet... 42 1.8
35gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complet... 42 1.8
36gb|AC092380.4| Homo sapiens chromosome 16 clone RP11-727M7, comp... 42 1.8
37dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
38dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
39dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.8
40dbj|AK118830.1| Arabidopsis thaliana At3g20110 mRNA for putative... 42 1.8
41dbj|AK120313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
42dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
43gb|AY107260.1| Zea mays PCO071008 mRNA sequence 42 1.8
44ref|XM_519003.1| PREDICTED: Pan troglodytes similar to HNRPA2B1 ... 40 7.0
45gb|AY022079.1| Oryza sativa microsatellite MRG4404 containing (T... 40 7.0
46gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, compl... 40 7.0
47gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosom... 40 7.0
48gb|BC000506.2| Homo sapiens heterogeneous nuclear ribonucleoprot... 40 7.0
49gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete se... 40 7.0
50gb|AC110682.6| Rattus norvegicus 18 BAC CH230-197I20 (Children's... 40 7.0
51emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chro... 40 7.0
52emb|CR858535.1| Pongo pygmaeus mRNA; cDNA DKFZp469B1233 (from cl... 40 7.0
53emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
54gb|U09121.1|AH005377S2 Human hnRNP protein A2 gene, exons 2-7 40 7.0
55emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in l... 40 7.0
56ref|NM_031243.1| Homo sapiens heterogeneous nuclear ribonucleopr... 40 7.0
57ref|NM_002137.2| Homo sapiens heterogeneous nuclear ribonucleopr... 40 7.0
58gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Ca... 40 7.0
59gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, compl... 40 7.0
60gb|DQ139261.1| Vibro sp. DAT722 inDAT722 integron, complete sequ... 40 7.0
61dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
62gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, com... 40 7.0
63gb|AF192348.1|AF192348 Saguinus oedipus vitamin D response eleme... 40 7.0
64dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
65dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
66emb|BX641084.1|HSM806891 Homo sapiens mRNA; cDNA DKFZp686K0732 (... 40 7.0
67dbj|AK129839.1| Homo sapiens cDNA FLJ26329 fis, clone HRT02026, ... 40 7.0
68dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.0
69emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (... 40 7.0
70gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, compl... 40 7.0
71gb|AC157955.2| Gallus gallus BAC clone TAM31-4B17 from chromosom... 40 7.0
72gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromoso... 40 7.0
73emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chr... 40 7.0
74dbj|D28877.1|HUMHNRNP Homo sapiens HNRPA2B1 gene for hnRNP prote... 40 7.0
75dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.0
76gb|M29064.1|HUMRNPB1A Human hnRNP B1 protein mRNA 40 7.0
77gb|M29065.1|HUMRNPA2A Human hnRNP A2 protein mRNA 40 7.0
78gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding p... 40 7.0 
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein
          Length = 1139

 Score =  825 bits (416), Expect = 0.0
 Identities = 439/449 (97%)
 Strand = Plus / Minus

                                                                        
Query: 69   aaaagttgaactcatggtattgacaagaaattaacatgattacaccagcagcgaacgaaa 128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 aaaagttgaactcatggtattgacaagaaattaacatgattacaccagcagcgaacgaaa 1074

                                                                        
Query: 129  gcatgnnnnnnntatgggatgggaggagagccagcatcaggaggctaatgcgggagtttc 188
            |||||       ||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 1073 gcatgaaaaaaatatgggatgggaggagagccaccatcgggaggctaatgcgggagtttc 1014

                                                                        
Query: 189  aagtggtgacatgcttcagtcttctgcagtaacatttcagcagtgttcccatgtgtccac 248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 aagtggtgacatgcttcagtcttctgcagtaacatttcagcagtgttcccatgtgtccac 954

                                                                        
Query: 249  gagaaacgccaagccatgctctccgccgctgcgccgcatcagaaccctcgctgtggtctc 308
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 953  gagaaacgccaagccatgctctccgccgctgcaccgcatcagaaccctcgctgtggtctc 894

                                                                        
Query: 309  tctgctgcaacgttcactcggagtgggcggccatccatctcctgtccatcaagcgctgaa 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  tctgctgcaacgttcactcggagtgggcggccatccatctcctgtccatcaagcgctgaa 834

                                                                        
Query: 369  atagcactgtcaagatcctcctttgaagccatagttacaaaaccaaatcctcgcgaacgc 428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833  atagcactgtcaagatcctcctttgaagccatagttacaaaaccaaatcctcgcgaacgc 774

                                                                        
Query: 429  ccagtttctctgtcatacacgatcgtagcattaactacttccccatgctcgctgaacatt 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  ccagtttctctgtcatacacgatcgtagcattaactacttccccatgctcgctgaacatt 714

                                         
Query: 489  tgcaccaacctagagtcttccgcttgcca 517
            |||||||||||||||||||||||||||||
Sbjct: 713  tgcaccaacctagagtcttccgcttgcca 685
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>ref|XM_483744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 353
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 600 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 541

                                                                       
Query: 354 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 413
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 540 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 481

                                                                       
Query: 414 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 473
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 480 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 421

                                                       
Query: 474 tgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           ||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 420 tgctcgctgaacaattgcagcagcctagagtcatccacttgcca 377
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>ref|XM_483743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 353
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 981 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 922

                                                                       
Query: 354 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 413
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 921 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 862

                                                                       
Query: 414 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 473
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 861 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 802

                                                       
Query: 474 tgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           ||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 801 tgctcgctgaacaattgcagcagcctagagtcatccacttgcca 758
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>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2
           mRNA
          Length = 1302

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 353
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 975 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 916

                                                                       
Query: 354 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 413
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 915 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 856

                                                                       
Query: 414 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 473
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 855 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 796

                                                       
Query: 474 tgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           ||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 795 tgctcgctgaacaattgcagcagcctagagtcatccacttgcca 752
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>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full
           insert sequence
          Length = 1230

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 353
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 978 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 919

                                                                       
Query: 354 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 413
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 918 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 859

                                                                       
Query: 414 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 473
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 858 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 799

                                                       
Query: 474 tgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           ||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 798 tgctcgctgaacaattgcagcagcctagagtcatccacttgcca 755
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>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full
           insert sequence
          Length = 927

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 353
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 600 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 541

                                                                       
Query: 354 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 413
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 540 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 481

                                                                       
Query: 414 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 473
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 480 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 421

                                                       
Query: 474 tgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           ||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 420 tgctcgctgaacaattgcagcagcctagagtcatccacttgcca 377
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>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full
           insert sequence
          Length = 1302

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 353
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 975 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 916

                                                                       
Query: 354 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 413
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 915 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 856

                                                                       
Query: 414 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 473
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 855 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 796

                                                       
Query: 474 tgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           ||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 795 tgctcgctgaacaattgcagcagcctagagtcatccacttgcca 752
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>gb|AY108263.1| Zea mays PCO100700 mRNA sequence
          Length = 891

 Score =  135 bits (68), Expect = 2e-28
 Identities = 185/224 (82%)
 Strand = Plus / Minus

                                                                       
Query: 282 ccgcatcagaaccctcgctgtggtctctctgctgcaacgttcactcggagtgggcggcca 341
           |||||||| || || | |||||| | |||||||||||| |||||||| || |||||||| 
Sbjct: 616 ccgcatcaaaagcccctctgtggccgctctgctgcaacattcactcgaagagggcggccg 557

                                                                       
Query: 342 tccatctcctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccata 401
           ||||  ||||||||||| || || |||||||||   |  || |||||||||||  |||| 
Sbjct: 556 tccaattcctgtccatctagggccgaaatagcatcattgagttcctcctttgacaccatt 497

                                                                       
Query: 402 gttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcatta 461
           | ||||||||| |||||||| || ||||||||||||||||| || || | | |||||| |
Sbjct: 496 gatacaaaaccgaatcctcgtgagcgcccagtttctctgtcgtagacaaccttagcatca 437

                                                       
Query: 462 actacttccccatgctcgctgaacatttgcaccaacctagagtc 505
           || ||||| ||||||||||||||||  ||||||| |||||||||
Sbjct: 436 acaacttctccatgctcgctgaacaactgcaccagcctagagtc 393
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                            
Query: 396      gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
                ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 22204251 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 22204310

                                                                            
Query: 456      gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
                || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 22204311 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 22204370

                  
Query: 516      ca 517
                ||
Sbjct: 22204371 ca 22204372
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>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0070E11
          Length = 142855

 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                         
Query: 396   gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
             ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 24149 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 24208

                                                                         
Query: 456   gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
             || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 24209 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 24268

               
Query: 516   ca 517
             ||
Sbjct: 24269 ca 24270
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>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0042B15
          Length = 157981

 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                          
Query: 396    gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
              ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 125744 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 125803

                                                                          
Query: 456    gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
              || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 125804 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 125863

                
Query: 516    ca 517
              ||
Sbjct: 125864 ca 125865
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>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full
           insert sequence
          Length = 1196

 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 883 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 824

                                                                       
Query: 456 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
           || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 823 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 764

             
Query: 516 ca 517
           ||
Sbjct: 763 ca 762
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>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full
           insert sequence
          Length = 1289

 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 884 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 825

                                                                       
Query: 456 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
           || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 824 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 765

             
Query: 516 ca 517
           ||
Sbjct: 764 ca 763
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 139/169 (82%)
 Strand = Plus / Plus

                                                                            
Query: 349      cctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaa 408
                ||||||||||||| || |||||||||   || || |||||||| || ||||| |  ||||
Sbjct: 27873548 cctgtccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaa 27873607

                                                                            
Query: 409      aaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactactt 468
                |||||||||| || |||||||||| |||||| || || || | || ||| ||||| || |
Sbjct: 27873608 aaccaaatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacct 27873667

                                                                 
Query: 469      ccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
                | |||||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 27873668 ctccatgctcgctgaacaattgcagcagcctagagtcatccacttgcca 27873716



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 294      cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatcca 345
                ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||
Sbjct: 27873352 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatcca 27873403
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>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 139/169 (82%)
 Strand = Plus / Plus

                                                                         
Query: 349   cctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaa 408
             ||||||||||||| || |||||||||   || || |||||||| || ||||| |  ||||
Sbjct: 81626 cctgtccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaa 81685

                                                                         
Query: 409   aaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactactt 468
             |||||||||| || |||||||||| |||||| || || || | || ||| ||||| || |
Sbjct: 81686 aaccaaatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacct 81745

                                                              
Query: 469   ccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
             | |||||||||||||||| ||||| || ||||||||| ||| |||||||
Sbjct: 81746 ctccatgctcgctgaacaattgcagcagcctagagtcatccacttgcca 81794



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 294   cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatcca 345
             ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||
Sbjct: 81430 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatcca 81481
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>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein
          Length = 3176

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                        
Query: 396  gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
            |||||||| |||||||||||||| ||||||||||||||||||| |||||| || |   | 
Sbjct: 2415 gccatagtaacaaaaccaaatccccgcgaacgcccagtttctcggtcatagacaactctg 2356

                                                                        
Query: 456  gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
            |||| ||||||||  ||||||||||||||||  | |||||| ||||| || ||| |||||
Sbjct: 2355 gcatcaactactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgc 2296

              
Query: 516  ca 517
            ||
Sbjct: 2295 ca 2294
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>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence
          Length = 1273

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                       
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
           |||||||| |||||||||||||| ||||||||||||||||||| |||||| || |   | 
Sbjct: 926 gccatagtaacaaaaccaaatccccgcgaacgcccagtttctcggtcatagacaactctg 867

                                                                       
Query: 456 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
           |||| ||||||||  ||||||||||||||||  | |||||| ||||| || ||| |||||
Sbjct: 866 gcatcaactactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgc 807

             
Query: 516 ca 517
           ||
Sbjct: 806 ca 805
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>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 102/122 (83%)
 Strand = Plus / Minus

                                                                       
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
           |||||||| |||||||||||||| || |||||||||||||||| |||||| || |   | 
Sbjct: 926 gccatagtaacaaaaccaaatccccgtgaacgcccagtttctcggtcatagacaactctg 867

                                                                       
Query: 456 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 515
           |||| ||||||||  ||||||||||||||||  | |||||| ||||| || ||| |||||
Sbjct: 866 gcatcaactactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgc 807

             
Query: 516 ca 517
           ||
Sbjct: 806 ca 805
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>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence
          Length = 1108

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 455
           |||||||| |||||||||||||| || |||| ||||||||||| |||||| || |   | 
Sbjct: 292 gccatagtaacaaaaccaaatccccgtgaacccccagtttctccgtcatagacaactctg 351

                                          
Query: 456 gcattaactacttccccatgctcgctgaaca 486
           |||| ||||||||  ||||||||||||||||
Sbjct: 352 gcatcaactactttaccatgctcgctgaaca 382
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>emb|X57079.1|NSCHRIB N.sylvestris DNA for 31kD chloroplast ribonucleoprotein
          Length = 5040

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 396  gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcata 445
            ||||| || ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3681 gccatcgtaacaaaaccaaaacctcgcgaccggccagtttctctgtcata 3632
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>emb|X53942.1|NSRNP31 Tobacco mRNA for 31 kDa chloroplast ribonucleoprotein
          Length = 1201

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcata 445
           ||||| || ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 952 gccatcgtaacaaaaccaaaacctcgcgaccggccagtttctctgtcata 903
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>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein
          Length = 1318

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 408 aaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactact 467
           ||||| || ||||| || |||||||| |||||||| || |||| | | ||||  || |||
Sbjct: 924 aaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccttggcatcgaccact 865

                                                             
Query: 468 tccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           |  ||||||||||||||||  | ||||||||||||||| ||| |||||||
Sbjct: 864 ttgccatgctcgctgaacagctccaccaacctagagtcgtccacttgcca 815
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>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781
          Length = 350

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 426 cgcccagtttctctgtcatacacgatcgtagcattaactacttccccatgctcgctgaac 485
           |||||||| |||||||| || |||| | | ||||  || ||||  |||||||||||||||
Sbjct: 195 cgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctcgctgaac 254

                                           
Query: 486 atttgcaccaacctagagtcttccgcttgcca 517
           |  | ||||||||||||||| ||| |||||||
Sbjct: 255 agctccaccaacctagagtcgtccacttgcca 286
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>ref|NM_129093.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G35410
           mRNA, complete cds
          Length = 1100

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 393 gaagccatagttacaaaaccaaatcctcg 421
           |||||||||||||||||| ||||||||||
Sbjct: 444 gaagccatagttacaaaagcaaatcctcg 416
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>gb|BT000365.1| Arabidopsis thaliana putative chloroplast RNA binding protein
           precursor (At2g35410) mRNA, complete cds
          Length = 963

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 393 gaagccatagttacaaaaccaaatcctcg 421
           |||||||||||||||||| ||||||||||
Sbjct: 431 gaagccatagttacaaaagcaaatcctcg 403
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>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete
             sequence
          Length = 79881

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 393   gaagccatagttacaaaaccaaatcctcg 421
             |||||||||||||||||| ||||||||||
Sbjct: 49989 gaagccatagttacaaaagcaaatcctcg 50017
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>gb|AY042799.1| Arabidopsis thaliana putative chloroplast RNA binding protein
           precursor (At2g35410; T32F12.21) mRNA, complete cds
          Length = 1062

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 393 gaagccatagttacaaaaccaaatcctcg 421
           |||||||||||||||||| ||||||||||
Sbjct: 445 gaagccatagttacaaaagcaaatcctcg 417
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>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds
          Length = 1161

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 408 aaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactact 467
           ||||||||||| || || |||||||| |||||||| || || | | | ||||  || |||
Sbjct: 799 aaaccaaatccccgtgagcgcccagtgtctctgtcgtagacaaccctggcatcgacaact 740

                                                             
Query: 468 tccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgcca 517
           |  || |||||||||||||  |  |||||||||||||| ||| |||||||
Sbjct: 739 ttgccgtgctcgctgaacagctctaccaacctagagtcgtccacttgcca 690
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>ref|NM_112902.2| Arabidopsis thaliana CYP705A20; heme binding / iron ion binding /
           monooxygenase/ oxygen binding AT3G20110 (CYP705A20)
           mRNA, complete cds
          Length = 1862

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   ttaccaacaaaaccttcttcg 25
           |||||||||||||||||||||
Sbjct: 845 ttaccaacaaaaccttcttcg 825
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>ref|XM_464698.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 405 acaaaaccaaatcctcgcgaacgcccagt 433
           ||||||||||||||||  |||||||||||
Sbjct: 602 acaaaaccaaatcctctagaacgcccagt 574
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>ref|XM_464699.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1927

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 405 acaaaaccaaatcctcgcgaacgcccagt 433
           ||||||||||||||||  |||||||||||
Sbjct: 820 acaaaaccaaatcctctagaacgcccagt 792
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>gb|BT006102.1| Arabidopsis thaliana clone U51190 putative cytochrome P450
           (At3g20110) mRNA, complete cds
          Length = 1564

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   ttaccaacaaaaccttcttcg 25
           |||||||||||||||||||||
Sbjct: 682 ttaccaacaaaaccttcttcg 662
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 405     acaaaaccaaatcctcgcgaacgcccagt 433
               ||||||||||||||||  |||||||||||
Sbjct: 6784888 acaaaaccaaatcctctagaacgcccagt 6784916



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 334      ggcggccatccatctcctgt 353
                ||||||||||||||||||||
Sbjct: 33700319 ggcggccatccatctcctgt 33700338
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>gb|AC013410.5| Homo sapiens BAC clone RP11-495I2 from 2, complete sequence
          Length = 200900

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 35     agaacactagggcatcattacagtagcct 63
              |||||||||||||  ||||||||||||||
Sbjct: 170126 agaacactagggctgcattacagtagcct 170154
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>gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complete sequence
          Length = 106992

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   ctcatggtattgacaagaaattaac 103
            |||||||| ||||||||||||||||
Sbjct: 5863 ctcatggttttgacaagaaattaac 5887
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>gb|AC092380.4| Homo sapiens chromosome 16 clone RP11-727M7, complete sequence
          Length = 167071

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ctacttgaaaagttgaactca 82
              |||||||||||||||||||||
Sbjct: 141210 ctacttgaaaagttgaactca 141190
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>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0758B01
          Length = 159206

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 405  acaaaaccaaatcctcgcgaacgcccagt 433
            ||||||||||||||||  |||||||||||
Sbjct: 2614 acaaaaccaaatcctctagaacgcccagt 2642
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1131G07
          Length = 133992

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 405    acaaaaccaaatcctcgcgaacgcccagt 433
              ||||||||||||||||  |||||||||||
Sbjct: 105941 acaaaaccaaatcctctagaacgcccagt 105969
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>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21
          Length = 83253

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     ttaccaacaaaaccttcttcg 25
             |||||||||||||||||||||
Sbjct: 42394 ttaccaacaaaaccttcttcg 42374
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>dbj|AK118830.1| Arabidopsis thaliana At3g20110 mRNA for putative cytochrome P450,
           complete cds, clone: RAFL21-16-G19
          Length = 1862

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   ttaccaacaaaaccttcttcg 25
           |||||||||||||||||||||
Sbjct: 845 ttaccaacaaaaccttcttcg 825
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>dbj|AK120313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L11, full
            insert sequence
          Length = 2473

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 405  acaaaaccaaatcctcgcgaacgcccagt 433
            ||||||||||||||||  |||||||||||
Sbjct: 1593 acaaaaccaaatcctctagaacgcccagt 1565
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>dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A08, full
           insert sequence
          Length = 1926

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 405 acaaaaccaaatcctcgcgaacgcccagt 433
           ||||||||||||||||  |||||||||||
Sbjct: 819 acaaaaccaaatcctctagaacgcccagt 791
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>gb|AY107260.1| Zea mays PCO071008 mRNA sequence
          Length = 737

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 261 gccatgctctccgccgctgcg 281
           |||||||||||||||||||||
Sbjct: 62  gccatgctctccgccgctgcg 82
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>ref|XM_519003.1| PREDICTED: Pan troglodytes similar to HNRPA2B1 protein (LOC463299),
           mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 420 agttacaaaaccaaatcctc 401
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>gb|AY022079.1| Oryza sativa microsatellite MRG4404 containing (TC)X15, closest to
           marker R3324, genomic sequence
          Length = 230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 ggcggccatccatctcctgt 353
           ||||||||||||||||||||
Sbjct: 66  ggcggccatccatctcctgt 85
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>gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, complete sequence
          Length = 191336

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    agttacaaaaccaaatcctc 420
              ||||||||||||||||||||
Sbjct: 174474 agttacaaaaccaaatcctc 174493
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>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    ggatgggaggagagccagcatcag 168
              |||||||||||||||||| |||||
Sbjct: 159538 ggatgggaggagagccagaatcag 159515
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>gb|BC000506.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1, mRNA
           (cDNA clone MGC:8493 IMAGE:2822109), complete cds
          Length = 1541

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 315 agttacaaaaccaaatcctc 296
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>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence
          Length = 125772

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 393   gaagccatagttacaaaaccaaatcctc 420
             |||| |||||| ||||||||||||||||
Sbjct: 96119 gaagacatagtaacaaaaccaaatcctc 96092
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>gb|AC110682.6| Rattus norvegicus 18 BAC CH230-197I20 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 166696

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ttaccaacaaaaccttcttc 24
              ||||||||||||||||||||
Sbjct: 103115 ttaccaacaaaaccttcttc 103134
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>emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chromosome 9 Contains part
             of the gene for a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 162657

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   tcaggaggctaatgcgggag 184
             ||||||||||||||||||||
Sbjct: 27901 tcaggaggctaatgcgggag 27882
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>emb|CR858535.1| Pongo pygmaeus mRNA; cDNA DKFZp469B1233 (from clone DKFZp469B1233)
          Length = 1735

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 375 agttacaaaaccaaatcctc 356
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>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   ctctccgccgctgcgccgca 286
             ||||||||||||||||||||
Sbjct: 58073 ctctccgccgctgcgccgca 58054
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>gb|U09121.1|AH005377S2 Human hnRNP protein A2 gene, exons 2-7
          Length = 2680

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 709 agttacaaaaccaaatcctc 690
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>emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in linkage group 11,
             complete sequence
          Length = 84892

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    agcctacttgaaaagttgaa 78
             ||||||||||||||||||||
Sbjct: 58928 agcctacttgaaaagttgaa 58909
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>ref|NM_031243.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1
           (HNRPA2B1), transcript variant B1, mRNA
          Length = 1780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 373 agttacaaaaccaaatcctc 354
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>ref|NM_002137.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1
           (HNRPA2B1), transcript variant A2, mRNA
          Length = 1714

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 337 agttacaaaaccaaatcctc 318
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>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC
             Library) complete sequence
          Length = 183586

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tcaggaggctaatgcgggag 184
             ||||||||||||||||||||
Sbjct: 18864 tcaggaggctaatgcgggag 18883
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>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence
          Length = 112659

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 401  agttacaaaaccaaatcctc 420
            ||||||||||||||||||||
Sbjct: 5177 agttacaaaaccaaatcctc 5196
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>gb|DQ139261.1| Vibro sp. DAT722 inDAT722 integron, complete sequence and flanking
             sequences
          Length = 136095

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aacaaaaccttcttcgatta 29
             ||||||||||||||||||||
Sbjct: 98969 aacaaaaccttcttcgatta 98950
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 267      ctctccgccgctgcgccgca 286
                ||||||||||||||||||||
Sbjct: 27789403 ctctccgccgctgcgccgca 27789384
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>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence
          Length = 186281

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   gccatagttacaaaaccaaa 415
             ||||||||||||||||||||
Sbjct: 96150 gccatagttacaaaaccaaa 96169
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>gb|AF192348.1|AF192348 Saguinus oedipus vitamin D response element binding protein
           (VDRE-BP2) mRNA, complete cds
          Length = 1736

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 340 agttacaaaaccaaatcctc 321
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>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1249_F12
          Length = 133205

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ggcggccatccatctcctgt 353
             ||||||||||||||||||||
Sbjct: 68726 ggcggccatccatctcctgt 68745
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0700F06
          Length = 139277

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ggcggccatccatctcctgt 353
             ||||||||||||||||||||
Sbjct: 31186 ggcggccatccatctcctgt 31205
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>emb|BX641084.1|HSM806891 Homo sapiens mRNA; cDNA DKFZp686K0732 (from clone DKFZp686K0732)
          Length = 5331

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  agttacaaaaccaaatcctc 420
            ||||||||||||||||||||
Sbjct: 3957 agttacaaaaccaaatcctc 3938
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>dbj|AK129839.1| Homo sapiens cDNA FLJ26329 fis, clone HRT02026, highly similar to
           Heterogeneous nuclear ribonucleoproteins A2/B1
          Length = 1704

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 338 agttacaaaaccaaatcctc 319
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>dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2589O24, complete
             sequence
          Length = 64281

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tcttctgcagtaacatttca 227
             ||||||||||||||||||||
Sbjct: 59392 tcttctgcagtaacatttca 59373
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>emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (from clone DKFZp686G0349)
          Length = 6299

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  agttacaaaaccaaatcctc 420
            ||||||||||||||||||||
Sbjct: 3217 agttacaaaaccaaatcctc 3198
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>gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, complete sequence
          Length = 168481

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    ggatgggaggagagccagcatcag 168
              |||||||||||||||||| |||||
Sbjct: 145026 ggatgggaggagagccagaatcag 145049
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>gb|AC157955.2| Gallus gallus BAC clone TAM31-4B17 from chromosome unknown, complete
             sequence
          Length = 181590

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   aggagagccagcatcaggag 171
             ||||||||||||||||||||
Sbjct: 38930 aggagagccagcatcaggag 38911
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>gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromosome unknown, complete
              sequence
          Length = 180657

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    aggagagccagcatcaggag 171
              ||||||||||||||||||||
Sbjct: 165604 aggagagccagcatcaggag 165585
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>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete
              sequence
          Length = 146143

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    tcaggaggctaatgcgggag 184
              ||||||||||||||||||||
Sbjct: 118302 tcaggaggctaatgcgggag 118321
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>dbj|D28877.1|HUMHNRNP Homo sapiens HNRPA2B1 gene for hnRNP protein A2 and B1, complete cds
          Length = 11390

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  agttacaaaaccaaatcctc 420
            ||||||||||||||||||||
Sbjct: 5762 agttacaaaaccaaatcctc 5743
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>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546,
             complete sequence
          Length = 107979

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tattgacaagaaattaacat 105
             ||||||||||||||||||||
Sbjct: 79592 tattgacaagaaattaacat 79573
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>gb|M29064.1|HUMRNPB1A Human hnRNP B1 protein mRNA
          Length = 1760

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 353 agttacaaaaccaaatcctc 334
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>gb|M29065.1|HUMRNPA2A Human hnRNP A2 protein mRNA
          Length = 1700

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agttacaaaaccaaatcctc 420
           ||||||||||||||||||||
Sbjct: 323 agttacaaaaccaaatcctc 304
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>gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding protein mRNA, complete
           cds
          Length = 1264

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 396 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtca 443
           |||||||| |||||  |||| || || ||||| |||||||||||||||
Sbjct: 774 gccatagtgacaaaggcaaagccacgtgaacggccagtttctctgtca 727


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,144,589
Number of Sequences: 3902068
Number of extensions: 4144589
Number of successful extensions: 80981
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80741
Number of HSP's gapped (non-prelim): 234
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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