ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475238.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
2gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AK107746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5ref|XM_463543.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-09
6gb|AY742218.1| Saccharum officinarum NAC23 mRNA, complete cds 72 2e-09
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
8gb|AF254558.1|AF254558 Oryza sativa NAC6 (NAC6) gene, complete cds 72 2e-09
9dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10dbj|AK068392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
11dbj|AB028185.1| Oryza sativa mRNA for OsNAC6 protein, complete cds 72 2e-09
12gb|AY109519.1| Zea mays CL5798_1 mRNA sequence 64 5e-07
13emb|AL008629.9|HS197O17 Human DNA sequence from clone RP1-197O17... 46 0.11
14ref|XM_537282.2| PREDICTED: Canis familiaris estrogen-regulated ... 44 0.43
15emb|AL590489.11| Human DNA sequence from clone RP11-412O4 on chr... 44 0.43
16emb|AL353895.4| Human DNA sequence from clone RP11-503K16 on chr... 44 0.43
17gb|BT016541.1| Zea mays clone Contig374 mRNA sequence 42 1.7
18gb|AC108853.7| Mus musculus chromosome 8, clone RP24-87L12, comp... 42 1.7
19gb|AC158214.4| Mus musculus chromosome 7, clone RP24-208N15, com... 42 1.7
20gb|DQ178995.1| Streptomyces clavuligerus putative zinc-binding c... 42 1.7
21gb|AC164399.4| Mus musculus chromosome 8, clone RP23-338K3, comp... 42 1.7
22gb|AC101980.8| Mus musculus chromosome 7, clone RP24-339E15, com... 42 1.7
23emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chro... 42 1.7
24emb|CR859357.1| Pongo pygmaeus mRNA; cDNA DKFZp469N1320 (from cl... 42 1.7
25gb|AE012169.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.7
26gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, comp... 42 1.7
27gb|AC026397.4| Homo sapiens chromosome 16 clone CTA-162C2, compl... 42 1.7
28gb|AC091060.10| Homo sapiens chromosome 18, clone RP11-723J4, co... 42 1.7
29gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.7
30gb|AC044802.6| Homo sapiens chromosome 16 clone RP11-61A14, comp... 42 1.7
31gb|U41060.2|HSU41060 Homo sapiens estrogen regulated LIV-1 prote... 42 1.7
32gb|AC007279.4| Homo sapiens BAC clone RP11-309N8 from 2, complet... 42 1.7
33ref|NM_012319.2| Homo sapiens solute carrier family 39 (zinc tra... 42 1.7
34emb|AM181327.1| Zea mays mRNA for putative glycosyltransferase (... 42 1.7
35gb|AC004638.1|HUAC004638 Homo sapiens Chromosome 16 BAC clone CI... 42 1.7
36ref|XM_466075.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
37gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 6.7
38gb|AC132832.13| Mus musculus chromosome 9, clone RP23-48D19, com... 40 6.7
39gb|AC087421.2| Felis catus clone RP86-177C24, complete sequence 40 6.7
40gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.7
41ref|XM_983668.1| PREDICTED: Mus musculus similar to ribosomal pr... 40 6.7
42gb|AC113110.17| Mus musculus chromosome 16, clone RP23-328A9, co... 40 6.7
43gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.7
44gb|AY392418.1|AY392417S2 Streptomyces clavuligerus plasmid pSCL2... 40 6.7
45emb|AL392045.9| Human DNA sequence from clone RP13-408A12 on chr... 40 6.7
46gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.7
47gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.7
48emb|AL096816.12|HSDJ47M23 Human DNA sequence from clone RP1-47M2... 40 6.7
49gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.7
50dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.7
51gb|AC092110.9| Homo sapiens 12 BAC RP11-287J11 (Roswell Park Can... 40 6.7
52gb|AC174000.3| Pan troglodytes BAC clone CH251-2O15 from chromos... 40 6.7
53dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 6.7
54gb|AC148313.3| Pan troglodytes BAC clone CH251-565C10 from chrom... 40 6.7
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
56dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
57dbj|BA000020.2| Nostoc sp. PCC 7120 plasmid pCC7120alpha DNA, co... 40 6.7
58gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Can... 40 6.7
59dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
60dbj|AK109538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
61dbj|AK100984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
62emb|AL449963.2|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M1... 40 6.7
63dbj|AK060863.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
64gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.7
65dbj|AP002090.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.7
66dbj|AP000430.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.7 
>ref|XM_475238.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 969

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                       
Query: 380 ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
           ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 834 ggcgaacgtgcgctcccactcggcgatcttgggctggctctgcacctccggccgctcg-a 776

                   
Query: 440 cgacgccg 447
           ||||||||
Sbjct: 775 cgacgccg 768



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 287 tcagaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgccg 338
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 969 tcagaacggcttgccccagtacatgaggatgtcctggaggagcgggtcgccg 918



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 51/56 (91%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 440 cgacgccgtcagcacgtgttccgagcagctcgagtccg---cgtgcgcccgcggca 492
           ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||
Sbjct: 756 cgacgtcgtcagcacgtgctccgagcagctcgagtccgcgccgtgcgcccgcggca 701
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>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                         
Query: 380   ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
             ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 78978 ggcgaacgtgcgctcccactcggcgatcttgggctggctctgcacctccggccgctcg-a 78920

                     
Query: 440   cgacgccg 447
             ||||||||
Sbjct: 78919 cgacgccg 78912



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                 
Query: 287   tcagaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgccg 338
             |||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 79113 tcagaacggcttgccccagtacatgaggatgtcctggaggagcgggtcgccg 79062



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 51/56 (91%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                     
Query: 440   cgacgccgtcagcacgtgttccgagcagctcgagtccg---cgtgcgcccgcggca 492
             ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||
Sbjct: 78900 cgacgtcgtcagcacgtgctccgagcagctcgagtccgcgccgtgcgcccgcggca 78845



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 192   cgatagattccggcggctcgcccgagtcaccccg 225
             |||| |||||| |||||||||||||| |||||||
Sbjct: 79204 cgatcgattccagcggctcgcccgagccaccccg 79171
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                            
Query: 380      ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
                ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 20535499 ggcgaacgtgcgctcccactcggcgatcttgggctggctctgcacctccggccgctcg-a 20535441

                        
Query: 440      cgacgccg 447
                ||||||||
Sbjct: 20535440 cgacgccg 20535433



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                    
Query: 287      tcagaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgccg 338
                |||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 20535634 tcagaacggcttgccccagtacatgaggatgtcctggaggagcgggtcgccg 20535583



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 51/56 (91%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                        
Query: 440      cgacgccgtcagcacgtgttccgagcagctcgagtccg---cgtgcgcccgcggca 492
                ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||
Sbjct: 20535421 cgacgtcgtcagcacgtgctccgagcagctcgagtccgcgccgtgcgcccgcggca 20535366



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 192      cgatagattccggcggctcgcccgagtcaccccg 225
                |||| |||||| |||||||||||||| |||||||
Sbjct: 20535725 cgatcgattccagcggctcgcccgagccaccccg 20535692
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>dbj|AK107746.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H04, full
           insert sequence
          Length = 841

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                       
Query: 380 ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
           ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 426 ggcgaacgtgcgctcccactcggcgatcttgggctggctctgcacctccggccgctcg-a 368

                   
Query: 440 cgacgccg 447
           ||||||||
Sbjct: 367 cgacgccg 360



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 287 tcagaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgccg 338
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 tcagaacggcttgccccagtacatgaggatgtcctggaggagcgggtcgccg 510



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 51/56 (91%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 440 cgacgccgtcagcacgtgttccgagcagctcgagtccg---cgtgcgcccgcggca 492
           ||||| |||||||||||| |||||||||||||||||||   |||||||||||||||
Sbjct: 348 cgacgtcgtcagcacgtgctccgagcagctcgagtccgcgccgtgcgcccgcggca 293



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 192 cgatagattccggcggctcgcccgagtcaccccg 225
           |||| |||||| |||||||||||||| |||||||
Sbjct: 652 cgatcgattccagcggctcgcccgagccaccccg 619
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>ref|XM_463543.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 289 agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgc 336
           |||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 910 agaatggcttgccccagtacatgaggatgtcctggaggagggggtcgc 863



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 93/114 (81%), Gaps = 3/114 (2%)
 Strand = Plus / Minus

                                                                       
Query: 380 ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
           |||||| || |||||||| |||  ||||||||||||||||||||||||    | | || |
Sbjct: 780 ggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcg---cacgcgaa 724

                                                                 
Query: 440 cgacgccgtcagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
           |  || || |||||| || ||||||||||||||||| ||||||  |||||||||
Sbjct: 723 ctccggcgacagcacctgctccgagcagctcgagtcggcgtgcagccgcggcat 670
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>gb|AY742218.1| Saccharum officinarum NAC23 mRNA, complete cds
          Length = 891

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 289 agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgccggc 340
           |||| |||||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 889 agaacggcttgccccagtacatgaggatgtcctgcagcagcgggtcgccggc 838



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 377 ggaggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctcc 428
           ||||||||| || |||||||| |||  |||||||||||||||||||||||||
Sbjct: 783 ggaggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcc 732



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 449 cagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
           |||||| || ||||||||||| ||||||||||||  |||||||||
Sbjct: 705 cagcacctgctccgagcagctggagtccgcgtgcagccgcggcat 661
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                                
Query: 289      agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgc 336
                |||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 38392762 agaatggcttgccccagtacatgaggatgtcctggaggagggggtcgc 38392809



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 93/114 (81%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                            
Query: 380      ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
                |||||| || |||||||| |||  ||||||||||||||||||||||||    | | || |
Sbjct: 38392892 ggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcg---cacgcgaa 38392948

                                                                      
Query: 440      cgacgccgtcagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
                |  || || |||||| || ||||||||||||||||| ||||||  |||||||||
Sbjct: 38392949 ctccggcgacagcacctgctccgagcagctcgagtcggcgtgcagccgcggcat 38393002
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>gb|AF254558.1|AF254558 Oryza sativa NAC6 (NAC6) gene, complete cds
          Length = 4817

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 289  agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgc 336
            |||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 4020 agaatggcttgccccagtacatgaggatgtcctggaggagggggtcgc 3973



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 93/114 (81%), Gaps = 3/114 (2%)
 Strand = Plus / Minus

                                                                        
Query: 380  ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
            |||||| || |||||||| |||  ||||||||||||||||||||||||    | | || |
Sbjct: 3890 ggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcg---cacgcgaa 3834

                                                                  
Query: 440  cgacgccgtcagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
            |  || || |||||| || ||||||||||||||||| ||||||  |||||||||
Sbjct: 3833 ctccggcgacagcacctgctccgagcagctcgagtcggcgtgcagccgcggcat 3780
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>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065E10
          Length = 183580

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                              
Query: 289    agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgc 336
              |||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 153587 agaatggcttgccccagtacatgaggatgtcctggaggagggggtcgc 153634



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 93/114 (81%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                          
Query: 380    ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
              |||||| || |||||||| |||  ||||||||||||||||||||||||    | | || |
Sbjct: 153717 ggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcg---cacgcgaa 153773

                                                                    
Query: 440    cgacgccgtcagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
              |  || || |||||| || ||||||||||||||||| ||||||  |||||||||
Sbjct: 153774 ctccggcgacagcacctgctccgagcagctcgagtcggcgtgcagccgcggcat 153827
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>dbj|AK068392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149P14, full
            insert sequence
          Length = 1529

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 289  agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgc 336
            |||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1021 agaatggcttgccccagtacatgaggatgtcctggaggagggggtcgc 974



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 93/114 (81%), Gaps = 3/114 (2%)
 Strand = Plus / Minus

                                                                       
Query: 380 ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
           |||||| || |||||||| |||  ||||||||||||||||||||||||    | | || |
Sbjct: 891 ggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcg---cacgcgaa 835

                                                                 
Query: 440 cgacgccgtcagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
           |  || || |||||| || ||||||||||||||||| ||||||  |||||||||
Sbjct: 834 ctccggcgacagcacctgctccgagcagctcgagtcggcgtgcagccgcggcat 781
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>dbj|AB028185.1| Oryza sativa mRNA for OsNAC6 protein, complete cds
          Length = 1423

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 289  agaaaggcttgccccagtacatgaggatgtcttggaggagcgggtcgc 336
            |||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1021 agaatggcttgccccagtacatgaggatgtcctggaggagggggtcgc 974



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 93/114 (81%), Gaps = 3/114 (2%)
 Strand = Plus / Minus

                                                                       
Query: 380 ggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctccggccgctcgca 439
           |||||| || |||||||| |||  ||||||||||||||||||||||||    | | || |
Sbjct: 891 ggcgaaggtgcgctcccactcgctgatcttgggctggctctgcacctcg---cacgcgaa 835

                                                                 
Query: 440 cgacgccgtcagcacgtgttccgagcagctcgagtccgcgtgcgcccgcggcat 493
           |  || || |||||| || ||||||||||||||||| ||||||  |||||||||
Sbjct: 834 ctccggcgacagcacctgctccgagcagctcgagtcggcgtgcagccgcggcat 781
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>gb|AY109519.1| Zea mays CL5798_1 mRNA sequence
          Length = 1022

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 377 ggaggcgaacgttcgctcccagtcggagatcttgggctggctctgcacctcc 428
           ||||||||| || |||||||| |||  |||||||||||||||||||||||||
Sbjct: 630 ggaggcgaaggtccgctcccactcgctgatcttgggctggctctgcacctcc 681



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 289 agaaaggcttgccccagtacatgaggatgtc 319
           |||| ||||||||||||||||||||||||||
Sbjct: 527 agaacggcttgccccagtacatgaggatgtc 557
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>emb|AL008629.9|HS197O17 Human DNA sequence from clone RP1-197O17 on chromosome Xq25-26.3
             Contains a pseudogene similar to part of SMT3 suppressor
             of mif two 3 (yeast), the 5' end of gene LOC286467 and a
             myofibrillogenesis regulator 1 (MR-1) (FKSG19) pseudogene,
             complete sequence
          Length = 161812

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 56    tatacaccatgaccaagtacagt 78
             |||||||||||||||||||||||
Sbjct: 71544 tatacaccatgaccaagtacagt 71522
to top
>ref|XM_537282.2| PREDICTED: Canis familiaris estrogen-regulated LIV-1 protein
           (LIV-1), mRNA
          Length = 2299

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 49  aaatccatatacaccatgacca 70
           ||||||||||||||||||||||
Sbjct: 269 aaatccatatacaccatgacca 290
to top
>emb|AL590489.11| Human DNA sequence from clone RP11-412O4 on chromosome 6q16.2-21 Contains
              part of the C6orf210 gene for chromosome 6 open reading
              frame 210, complete sequence
          Length = 130146

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 57     atacaccatgaccaagtacagt 78
              ||||||||||||||||||||||
Sbjct: 119174 atacaccatgaccaagtacagt 119195
to top
>emb|AL353895.4| Human DNA sequence from clone RP11-503K16 on chromosome 9 Contains the
             3' end of the ADAMTSL1 gene for ADAMTS-like (ADAMTSR1,
             MGC40139) and a ras-related protein family pseudogene,
             complete sequence
          Length = 163163

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 57    atacaccatgaccaagtacagt 78
             ||||||||||||||||||||||
Sbjct: 39644 atacaccatgaccaagtacagt 39623
to top
>gb|BT016541.1| Zea mays clone Contig374 mRNA sequence
          Length = 1664

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 393 tcccagtcggagatcttgggc 413
           |||||||||||||||||||||
Sbjct: 339 tcccagtcggagatcttgggc 319
to top
>gb|AC108853.7| Mus musculus chromosome 8, clone RP24-87L12, complete sequence
          Length = 171410

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    tatacaccatgaccaagtaca 76
             |||||||||||||||||||||
Sbjct: 29537 tatacaccatgaccaagtaca 29557
to top
>gb|AC158214.4| Mus musculus chromosome 7, clone RP24-208N15, complete sequence
          Length = 175320

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 299   gccccagtacatgaggatgtc 319
             |||||||||||||||||||||
Sbjct: 34529 gccccagtacatgaggatgtc 34509
to top
>gb|DQ178995.1| Streptomyces clavuligerus putative zinc-binding carboxypeptidase
           (zbcp) gene, partial cds; and glyceraldehyde-3-phosphate
           dehydrogenase (gap1) gene, complete cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 332 gtcgccggccggcagccccgc 352
           |||||||||||||||||||||
Sbjct: 138 gtcgccggccggcagccccgc 158
to top
>gb|AC164399.4| Mus musculus chromosome 8, clone RP23-338K3, complete sequence
          Length = 213363

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    tatacaccatgaccaagtaca 76
             |||||||||||||||||||||
Sbjct: 39594 tatacaccatgaccaagtaca 39574
to top
>gb|AC101980.8| Mus musculus chromosome 7, clone RP24-339E15, complete sequence
          Length = 219739

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   gccccagtacatgaggatgtc 319
             |||||||||||||||||||||
Sbjct: 37526 gccccagtacatgaggatgtc 37546
to top
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete
              sequence
          Length = 155196

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 303    cagtacatgaggatgtcttgg 323
              |||||||||||||||||||||
Sbjct: 141014 cagtacatgaggatgtcttgg 141034
to top
>emb|CR859357.1| Pongo pygmaeus mRNA; cDNA DKFZp469N1320 (from clone DKFZp469N1320)
          Length = 2968

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  aatccatatacaccatgacca 70
           |||||||||||||||||||||
Sbjct: 557 aatccatatacaccatgacca 577
to top
>gb|AE012169.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 77 of
             460 of the complete genome
          Length = 13011

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 327   agcgggtcgccggccggcagc 347
             |||||||||||||||||||||
Sbjct: 12324 agcgggtcgccggccggcagc 12344
to top
>gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, complete sequence
          Length = 206102

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ccggccggcagccccgccgcc 356
           |||||||||||||||||||||
Sbjct: 645 ccggccggcagccccgccgcc 665
to top
>gb|AC026397.4| Homo sapiens chromosome 16 clone CTA-162C2, complete sequence
          Length = 124998

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   ccggccggcagccccgccgcc 356
             |||||||||||||||||||||
Sbjct: 45095 ccggccggcagccccgccgcc 45115
to top
>gb|AC091060.10| Homo sapiens chromosome 18, clone RP11-723J4, complete sequence
          Length = 221941

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     aatccatatacaccatgacca 70
              |||||||||||||||||||||
Sbjct: 187100 aatccatatacaccatgacca 187080
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 327     agcgggtcgccggccggcagc 347
               |||||||||||||||||||||
Sbjct: 4184274 agcgggtcgccggccggcagc 4184254
to top
>gb|AC044802.6| Homo sapiens chromosome 16 clone RP11-61A14, complete sequence
          Length = 170691

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   ccggccggcagccccgccgcc 356
             |||||||||||||||||||||
Sbjct: 70978 ccggccggcagccccgccgcc 70998
to top
>gb|U41060.2|HSU41060 Homo sapiens estrogen regulated LIV-1 protein (LIV-1) mRNA,
           complete cds
          Length = 2744

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  aatccatatacaccatgacca 70
           |||||||||||||||||||||
Sbjct: 404 aatccatatacaccatgacca 424
to top
>gb|AC007279.4| Homo sapiens BAC clone RP11-309N8 from 2, complete sequence
          Length = 138270

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    tatacaccatgaccaagtaca 76
             |||||||||||||||||||||
Sbjct: 45320 tatacaccatgaccaagtaca 45300
to top
>ref|NM_012319.2| Homo sapiens solute carrier family 39 (zinc transporter), member 6
           (SLC39A6), mRNA
          Length = 2744

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  aatccatatacaccatgacca 70
           |||||||||||||||||||||
Sbjct: 404 aatccatatacaccatgacca 424
to top
>emb|AM181327.1| Zea mays mRNA for putative glycosyltransferase (x34.2 gene)
          Length = 2130

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 393 tcccagtcggagatcttgggc 413
           |||||||||||||||||||||
Sbjct: 820 tcccagtcggagatcttgggc 800
to top
>gb|AC004638.1|HUAC004638 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-116A10, complete
             sequence
          Length = 124645

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   ccggccggcagccccgccgcc 356
             |||||||||||||||||||||
Sbjct: 45097 ccggccggcagccccgccgcc 45117
to top
>ref|XM_466075.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1910

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 393 tcccagtcggagatcttggg 412
           ||||||||||||||||||||
Sbjct: 743 tcccagtcggagatcttggg 724
to top
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    tgaggatgtcttggaggagc 329
              ||||||||||||||||||||
Sbjct: 361614 tgaggatgtcttggaggagc 361633
to top
>gb|AC132832.13| Mus musculus chromosome 9, clone RP23-48D19, complete sequence
          Length = 230772

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 326    gagcgggtcgccggccggcagccccgcc 353
              ||||||||||||||||||  ||||||||
Sbjct: 148477 gagcgggtcgccggccggtggccccgcc 148450
to top
>gb|AC087421.2| Felis catus clone RP86-177C24, complete sequence
          Length = 141881

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gggctcccgcgtctcatcgc 127
             ||||||||||||||||||||
Sbjct: 79487 gggctcccgcgtctcatcgc 79468
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 393      tcccagtcggagatcttggg 412
                ||||||||||||||||||||
Sbjct: 10520650 tcccagtcggagatcttggg 10520669
to top
>ref|XM_983668.1| PREDICTED: Mus musculus similar to ribosomal protein L31
           (LOC675618), mRNA
          Length = 1686

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 326 gagcgggtcgccggccggcagccccgcc 353
           ||||||||||||||||||  ||||||||
Sbjct: 446 gagcgggtcgccggccggtggccccgcc 419
to top
>gb|AC113110.17| Mus musculus chromosome 16, clone RP23-328A9, complete sequence
          Length = 240173

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 8      taaaacatttccaaaccaatcgcatata 35
              ||||||||||||||| |||| |||||||
Sbjct: 177516 taaaacatttccaaaacaattgcatata 177489
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     ctacgagtatctgctgtcga 194
               ||||||||||||||||||||
Sbjct: 3461499 ctacgagtatctgctgtcga 3461480
to top
>gb|AY392418.1|AY392417S2 Streptomyces clavuligerus plasmid pSCL2 clone contig7.207-II, partial
             sequence
          Length = 15013

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   cgggtcgccggccggcagcc 348
             ||||||||||||||||||||
Sbjct: 12650 cgggtcgccggccggcagcc 12631
to top
>emb|AL392045.9| Human DNA sequence from clone RP13-408A12 on chromosome 10, complete
             sequence
          Length = 161933

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    atatacaccatgaccaagta 74
             ||||||||||||||||||||
Sbjct: 25878 atatacaccatgaccaagta 25859
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    cgccggccggcagccccgcc 353
              ||||||||||||||||||||
Sbjct: 573247 cgccggccggcagccccgcc 573228
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    tcgccggccggcagccccgc 352
              ||||||||||||||||||||
Sbjct: 946392 tcgccggccggcagccccgc 946411
to top
>emb|AL096816.12|HSDJ47M23 Human DNA sequence from clone RP1-47M23 on chromosome 6q16.2-21
            Contains the 3' end of a novel gene (FLJ00197, novel SAM
            domain (Sterile alpha motif) containing protein gene),
            the 3' end of another novel gene and a CpG island,
            complete sequence
          Length = 129320

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   atatacaccatgaccaagta 74
            ||||||||||||||||||||
Sbjct: 2378 atatacaccatgaccaagta 2359
to top
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tcccagtcggagatcttggg 412
             ||||||||||||||||||||
Sbjct: 76463 tcccagtcggagatcttggg 76482
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 327     agcgggtcgccggccggcag 346
               ||||||||||||||||||||
Sbjct: 4091625 agcgggtcgccggccggcag 4091606
to top
>gb|AC092110.9| Homo sapiens 12 BAC RP11-287J11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181207

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     atatacaccatgaccaagta 74
              ||||||||||||||||||||
Sbjct: 125053 atatacaccatgaccaagta 125072
to top
>gb|AC174000.3| Pan troglodytes BAC clone CH251-2O15 from chromosome 7, complete sequence
          Length = 161527

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aaaagtaaaacatttccaaa 22
              ||||||||||||||||||||
Sbjct: 106698 aaaagtaaaacatttccaaa 106717
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     tcgccgccgtccgtgactcc 143
               ||||||||||||||||||||
Sbjct: 2031041 tcgccgccgtccgtgactcc 2031060
to top
>gb|AC148313.3| Pan troglodytes BAC clone CH251-565C10 from chromosome 7, complete
             sequence
          Length = 183205

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaagtaaaacatttccaaa 22
             ||||||||||||||||||||
Sbjct: 68453 aaaagtaaaacatttccaaa 68472
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 393      tcccagtcggagatcttggg 412
                ||||||||||||||||||||
Sbjct: 10518751 tcccagtcggagatcttggg 10518770
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 393      tcccagtcggagatcttggg 412
                ||||||||||||||||||||
Sbjct: 19472236 tcccagtcggagatcttggg 19472255
to top
>dbj|BA000020.2| Nostoc sp. PCC 7120 plasmid pCC7120alpha DNA, complete genome
          Length = 408101

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aacatttccaaaccaatcgc 30
             ||||||||||||||||||||
Sbjct: 25022 aacatttccaaaccaatcgc 25041
to top
>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191463

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    atatacaccatgaccaagta 74
             ||||||||||||||||||||
Sbjct: 99189 atatacaccatgaccaagta 99208
to top
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476H10
          Length = 151703

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tcccagtcggagatcttggg 412
             ||||||||||||||||||||
Sbjct: 89763 tcccagtcggagatcttggg 89782
to top
>dbj|AK109538.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D08, full
           insert sequence
          Length = 2492

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 393 tcccagtcggagatcttggg 412
           ||||||||||||||||||||
Sbjct: 969 tcccagtcggagatcttggg 988
to top
>dbj|AK100984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D01, full
           insert sequence
          Length = 1910

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 393 tcccagtcggagatcttggg 412
           ||||||||||||||||||||
Sbjct: 743 tcccagtcggagatcttggg 724
to top
>emb|AL449963.2|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M15, complete sequence
          Length = 213216

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     atacaccatgaccaagtaca 76
              ||||||||||||||||||||
Sbjct: 160383 atacaccatgaccaagtaca 160364
to top
>dbj|AK060863.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G06, full
           insert sequence
          Length = 1245

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 393 tcccagtcggagatcttggg 412
           ||||||||||||||||||||
Sbjct: 51  tcccagtcggagatcttggg 32
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 327     agcgggtcgccggccggcag 346
               ||||||||||||||||||||
Sbjct: 4096224 agcgggtcgccggccggcag 4096205
to top
>dbj|AP002090.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1173D11
          Length = 170188

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    aaaagtaaaacatttccaaa 22
            ||||||||||||||||||||
Sbjct: 1157 aaaagtaaaacatttccaaa 1176
to top
>dbj|AP000430.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1585C12
          Length = 146132

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aaaagtaaaacatttccaaa 22
             ||||||||||||||||||||
Sbjct: 52042 aaaagtaaaacatttccaaa 52023


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,505,757
Number of Sequences: 3902068
Number of extensions: 3505757
Number of successful extensions: 91471
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90899
Number of HSP's gapped (non-prelim): 568
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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