Clone Name | rbart22c03 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 237 bits (604), Expect = 1e-62 Identities = 106/115 (92%), Positives = 111/115 (96%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRFYV 293 ATVRCGYPPAAHVGRALATGIFERVHVRTYESD CNQN GWEGSW++WTAAYPATRFYV Sbjct: 190 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYV 249 Query: 292 GLTADDKSYQWVHPRNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 128 GLTADDKS+QWVHP+NVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 250 GLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 104 bits (260), Expect = 1e-22 Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 6/121 (4%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNF----GWEGSWNEWTAAYPAT 305 ATVRC +P + +AL T +FER+HVR Y+ D C+ N G WN+WTA YP + Sbjct: 186 ATVRCAFPDP-RMKKALDTKLFERIHVRFYD-DATCSYNHAGLAGVMAQWNKWTARYPGS 243 Query: 304 RFYVGLTADDK--SYQWVHPRNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYY 131 Y+GL A + V + +YY + P QK NYGGIMLWDR++DKQT Y +KY+ Sbjct: 244 HVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYW 303 Query: 130 A 128 A Sbjct: 304 A 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 92.0 bits (227), Expect = 7e-19 Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 1/109 (0%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRFYV 293 AT RC YP + +ALATG+F R+HVR + D C + + SW +W AA+P ++ Y+ Sbjct: 183 ATTRCSYPDH-RLEKALATGVFARIHVRMF-GDEQCTMSPRY--SWEKWAAAFPGSKVYI 238 Query: 292 GLTAD-DKSYQWVHPRNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 149 GL A ++ W+ +++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 239 GLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 68.6 bits (166), Expect = 8e-12 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 6/118 (5%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWNEWTAAYPAT 305 A +C +P G AL TG+F+ V V+ Y + C + G SWN WT++ +T Sbjct: 183 AAPQCPFPDKVP-GTALNTGLFDYVWVQFYNNPP-CQYSSGNTNNLLNSWNRWTSSINST 240 Query: 304 RFYVGLTADDKSY-QWVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137 ++GL A + + P NV S + PV ++ YGG+MLW +Y+D Q+ YSS IK Sbjct: 241 GSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 65.1 bits (157), Expect = 9e-11 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNEWTAAYPA 308 A +C YP A H+ A+ TG+F+ V V+ Y + NG N +WN+WT++ A Sbjct: 175 AAPQCPYPDA-HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNL--VNAWNQWTSSQ-A 230 Query: 307 TRFYVGLTADDKSYQ--WVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137 + ++G+ A D + + P +V S V P + YGG+M+WDR+ D Q+ YS+ IK Sbjct: 231 KQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 63.5 bits (153), Expect = 3e-10 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 6/117 (5%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWTAAYPAT 305 A +C +P ++G AL TG+F+ V V+ Y + C + G SWN WT + A Sbjct: 181 AAPQCPFPDR-YLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRWTTSINAG 238 Query: 304 RFYVGLTADDKSYQ--WVHPRNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140 + ++GL A ++ +V P + + P +K YGG+MLW +++D + YSS I Sbjct: 239 KIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 62.4 bits (150), Expect = 6e-10 Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDN----GCNQNFGWEGSWNEWTAAYPAT 305 A +C +P G AL TG+F+ V V+ Y + ++NF + WN+WT+ PA Sbjct: 178 AAPQCPFPDKLLNG-ALQTGLFDYVWVQFYNNPECEFMSNSENF--KRRWNQWTSI-PAK 233 Query: 304 RFYVGL----TADDKSYQWVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140 + Y+GL TA Y P+ V S V P + YGG+MLW+R FD Q YSS I Sbjct: 234 KLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAI 290 Query: 139 K 137 + Sbjct: 291 R 291
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 61.2 bits (147), Expect = 1e-09 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 9/113 (7%) Frame = -2 Query: 448 PAAHVGRALATGIFERVHVRTYES------DNGCNQNFGWEGSWNEWTAAYPATRFYVGL 287 P AH+ A+ TG+F+ V V+ Y + DN N SWN+WTA +P ++ Y+GL Sbjct: 183 PDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLL----SSWNQWTA-FPTSKLYMGL 237 Query: 286 TADDKSYQ--WVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137 A ++ P +V S V P + NYGG+MLW + FD YS IK Sbjct: 238 PAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 60.8 bits (146), Expect = 2e-09 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Frame = -2 Query: 463 RCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNEWTAAYPATRF 299 +C +P +G AL T F+ V ++ Y + +G QN SWN+WT + A +F Sbjct: 187 QCPFPDRL-MGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLF--DSWNKWTTSIAAQKF 243 Query: 298 YVGLTADDKSYQ--WVHPRNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140 ++GL A ++ ++ P + + P +K YGG+MLW +++D + YSS I Sbjct: 244 FLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 58.2 bits (139), Expect = 1e-08 Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 6/109 (5%) Frame = -2 Query: 448 PAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWNEWTAAYPATRFYVGLTA 281 P AH+ A+ TG+F+ V V+ Y + C + G SWN+WT++ A + ++G+ A Sbjct: 188 PDAHLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWNQWTSSQ-AKQLFLGVPA 245 Query: 280 DDKSY-QWVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140 + P +V S V P + YGG+MLWDR+ D Q+ YS I Sbjct: 246 STAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 52.0 bits (123), Expect = 8e-07 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 5/109 (4%) Frame = -2 Query: 448 PAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG---SWNEWTAAYPATRFYVGLTAD 278 P A + A+ATG+F+ V V+ Y + C + + SWN+WT A + ++GL A Sbjct: 186 PDASLSTAIATGLFDYVWVQFYNNPP-CQYDTSADNLLSSWNQWTTVQ-ANQIFLGLPAS 243 Query: 277 -DKSYQWVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137 D + P + S V P + YGG+MLW + +D + YSS IK Sbjct: 244 TDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 49.7 bits (117), Expect = 4e-06 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWTAAYPAT 305 A +C +P G AL+TG+F+ V V+ Y + C + G + WN+W A A Sbjct: 176 AAPQCPFPDTWLNG-ALSTGLFDYVWVQFYNNPP-CQYSGGSADNLKNYWNQWNAIQ-AG 232 Query: 304 RFYVGL-TADDKSYQWVHPRNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137 + ++GL A + P +V S V P+ YGG+MLW +++D YSS IK Sbjct: 233 KIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.4 bits (98), Expect = 6e-04 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Frame = -2 Query: 448 PAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGL 287 P ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLEL 251 Query: 286 TADDKSYQ---WVHPRNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 134 A + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.7 bits (73), Expect = 0.49 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 302 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 301 FYVGL----TADDKSYQWVHPRNVYYSVAP-VSQKKDNYGGIMLWD 179 + TA Y P + ++ P ++ K +YGG+ +WD Sbjct: 251 IMFTVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 31.6 bits (70), Expect = 1.1 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -2 Query: 472 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 302 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 301 FYVGL----TADDKSYQWVHPRNVYYSVAP-VSQKKDNYGGIMLWD 179 + TA Y P + ++ P ++ + +YGG+ +WD Sbjct: 251 IMFTIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -2 Query: 292 GLTADDKSYQWVH-PRNVYYSVAPVSQKKDNYGGIMLWD 179 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 7.1 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -2 Query: 355 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPRNVYYSVAPVSQKKDNYGGIM 188 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 187 -LW-DRYFDKQTN 155 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,743,535 Number of Sequences: 219361 Number of extensions: 981387 Number of successful extensions: 2846 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2768 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2830 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)