>YMDA_CHLAU (Q45826) Hypothetical RNA pseudouridine synthase in mdh 5'region|
           (EC 5.4.99.-) (RNA-uridine isomerase) (RNA
           pseudouridylate synthase) (ORFA) (Fragment)
          Length = 253

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 258 LRTLYHLLVQGRCPPRFFIADGPLGAQPLCKMEQLSLVDSHPLRHH 395
           +R +Y  LV GR PP     D P+G  P  ++    + D  P R H
Sbjct: 113 MRKIYQALVIGR-PPETGTIDAPIGRDPRDRLRMAVVPDGRPARTH 157

>YN81_CAEEL (Q03610) Hypothetical protein ZC84.1 in chromosome III|
          Length = 1416

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 382  GWESTRESCSILQSGCAPRGPSAMKNLGGHLPC 284
            G     E C + QS C PRG +  K+L GH  C
Sbjct: 1032 GMSGEPEKCVVGQSNC-PRGFACQKSLAGHHVC 1063

>NOSZ_BRAJA (Q89XJ6) Nitrous-oxide reductase precursor (EC 1.7.99.6) (N(2)OR)|
           (N2O reductase)
          Length = 650

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 382 GWESTRESCSILQSGCAPRGPSAMKNLGG 296
           GW  T ES  +L  G  P     +KN GG
Sbjct: 111 GWGQTNESLKVLTEGMQPATREFLKNRGG 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,418,681
Number of Sequences: 219361
Number of extensions: 1202106
Number of successful extensions: 2563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)