ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart22b11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 281 bits (142), Expect = 1e-72 Identities = 286/334 (85%) Strand = Plus / Minus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtactgcctc 194 ||||| |||||| |||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 29783727 gatcagttgagagatttgaggtagtccttgaggtccgtggggaagcaagggtactgcctc 29783668 Query: 195 cagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgagccg 254 ||||||||||||||| | | |||||| ||||| |||| ||||||||||||||||||| Sbjct: 29783667 cagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgagctc 29783608 Query: 255 tccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtccagc 314 ||| | |||| |||||||||||||||||||||| |||||| | |||||||||| |||||| Sbjct: 29783607 tccacttgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctccagc 29783548 Query: 315 accctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagcctc 374 |||||||| | ||| || ||||||| ||||||||||||||||||||| || |||||| Sbjct: 29783547 accctctcggcgggggccggggcgcacgccaccagccacagcacgttgacggcgagcctc 29783488 Query: 375 gtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccgtgc 434 ||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || ||||||||| Sbjct: 29783487 gtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccgtgc 29783428 Query: 435 tccccgaacgcgagccggccctccgggcacttgc 468 || |||| || ||||| ||||| |||||||||| Sbjct: 29783427 tcggcgaaggccagccgcccctcggggcacttgc 29783394
>dbj|AK070506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050H20, full insert sequence Length = 1588 Score = 281 bits (142), Expect = 1e-72 Identities = 286/334 (85%) Strand = Plus / Minus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtactgcctc 194 ||||| |||||| |||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 1310 gatcagttgagagatttgaggtagtccttgaggtccgtggggaagcaagggtactgcctc 1251 Query: 195 cagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgagccg 254 ||||||||||||||| | | |||||| ||||| |||| ||||||||||||||||||| Sbjct: 1250 cagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgagctc 1191 Query: 255 tccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtccagc 314 ||| | |||| |||||||||||||||||||||| |||||| | |||||||||| |||||| Sbjct: 1190 tccacttgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctccagc 1131 Query: 315 accctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagcctc 374 |||||||| | ||| || ||||||| ||||||||||||||||||||| || |||||| Sbjct: 1130 accctctcggcgggggccggggcgcacgccaccagccacagcacgttgacggcgagcctc 1071 Query: 375 gtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccgtgc 434 ||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || ||||||||| Sbjct: 1070 gtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccgtgc 1011 Query: 435 tccccgaacgcgagccggccctccgggcacttgc 468 || |||| || ||||| ||||| |||||||||| Sbjct: 1010 tcggcgaaggccagccgcccctcggggcacttgc 977
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 281 bits (142), Expect = 1e-72 Identities = 286/334 (85%) Strand = Plus / Minus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtactgcctc 194 ||||| |||||| |||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 64653 gatcagttgagagatttgaggtagtccttgaggtccgtggggaagcaagggtactgcctc 64594 Query: 195 cagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgagccg 254 ||||||||||||||| | | |||||| ||||| |||| ||||||||||||||||||| Sbjct: 64593 cagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgagctc 64534 Query: 255 tccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtccagc 314 ||| | |||| |||||||||||||||||||||| |||||| | |||||||||| |||||| Sbjct: 64533 tccacttgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctccagc 64474 Query: 315 accctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagcctc 374 |||||||| | ||| || ||||||| ||||||||||||||||||||| || |||||| Sbjct: 64473 accctctcggcgggggccggggcgcacgccaccagccacagcacgttgacggcgagcctc 64414 Query: 375 gtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccgtgc 434 ||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || ||||||||| Sbjct: 64413 gtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccgtgc 64354 Query: 435 tccccgaacgcgagccggccctccgggcacttgc 468 || |||| || ||||| ||||| |||||||||| Sbjct: 64353 tcggcgaaggccagccgcccctcggggcacttgc 64320
>ref|XM_473711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1266 Score = 278 bits (140), Expect = 2e-71 Identities = 281/328 (85%) Strand = Plus / Minus Query: 141 ttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtactgcctccagaac 200 |||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 1262 ttgagagatttgaggtagtccttgaggtccgtggggaagcaagggtactgcctccagaac 1203 Query: 201 gcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgagccgtccgcc 260 ||||||||| | | |||||| ||||| |||| ||||||||||||||||||| ||| | Sbjct: 1202 gcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgagctctccact 1143 Query: 261 tgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtccagcaccctc 320 |||| |||||||||||||||||||||| |||||| | |||||||||| |||||||||||| Sbjct: 1142 tgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctccagcaccctc 1083 Query: 321 tccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagcctcgtggcc 380 || | ||| || ||||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 1082 tcggcgggggccggggcgcacgccaccagccacagcacgttgacggcgagcctcgtggcg 1023 Query: 381 aggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccgtgctccccg 440 || ||||| ||||| ||||| | ||| ||||||| ||||| || ||||||||||| || Sbjct: 1022 agcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccgtgctcggcg 963 Query: 441 aacgcgagccggccctccgggcacttgc 468 || || ||||| ||||| |||||||||| Sbjct: 962 aaggccagccgcccctcggggcacttgc 935
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 264 bits (133), Expect = 2e-67 Identities = 285/335 (85%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtact---gc 191 ||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||| || Sbjct: 6473561 gatcagttgagaaatttgaggtagtccttgaggtccgtggggaagcaagggtactactgc 6473620 Query: 192 ctccagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgag 251 |||||||||||||||||| | | |||||| ||||| |||| |||||||||||||||||| Sbjct: 6473621 ctccagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgag 6473680 Query: 252 ccgtccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtcc 311 | ||| |||||| |||||||||||||||||||||| |||||| | |||||||||| ||| Sbjct: 6473681 ctctccacctgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctcc 6473740 Query: 312 agcaccctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagc 371 ||||||||||| | ||| | ||||||| ||||||||||||||||||||| |||||| Sbjct: 6473741 agcaccctctcggcgggggtgggggcgcacgccaccagccacagcacgttgacggccagc 6473800 Query: 372 ctcgtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccg 431 |||||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || |||||| Sbjct: 6473801 ctcgtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccg 6473860 Query: 432 tgctccccgaacgcgagccggccctccgggcactt 466 |||| |||| || ||||| ||||| |||||||| Sbjct: 6473861 tgctaggcgaaggccagccgcccctcggggcactt 6473895 Score = 71.9 bits (36), Expect = 2e-09 Identities = 248/318 (77%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 151 tgaggtagtccttgaggtcggcggggatgcaagggtactgcctccagaacgcgccgtgca 210 ||||||||||| ||| ||||| |||| ||| | |||||||||||||| | ||||| | Sbjct: 28371843 tgaggtagtccctgaagtcggtagggaagcacgcgtactgcctccagactaccccgtgga 28371784 Query: 211 ccctgagcatcctcaccaccttctccttggtcgacggcgagccgtccgcctgcagcagcg 270 ||| | |||||||||| ||||| ||| ||||||||||||| || | || |||||| Sbjct: 28371783 tcctaaccatcctcaccgtcttctgcttcgtcgacggcgagctctcgacgtggagcagcc 28371724 Query: 271 ccagcagcttcgccacgccgccgctcgccaccatgtcgtccagcaccctctccgtgggcc 330 |||| |||||||| ||| ||||| || || |||||| || || ||| |||||| ||| Sbjct: 28371723 ccaggagcttcgcgacggcgccggtcagcatcatgtcctcgaggaccttctccgacggcg 28371664 Query: 331 gcgccgcgcacgacaccagccacagcacgttgaccgccagcctcgtggccaggccggata 390 | || || ||||| ||||||||||| ||||| || ||| ||||| ||| | || | Sbjct: 28371663 ccaccacg---gacacgagccacagcaccttgacggcgagctgcgtggacagctccgaca 28371607 Query: 391 cccgcagcaccgtccgcaccacggccgccacggcgagcccgtgctccccgaacgcgagcc 450 | ||||||| ||||| | ||||||||||||| | || |||||||| |||| ||||||| Sbjct: 28371606 cgcgcagcatcgtcctcgccacggccgccaccgacaggtcgtgctccgcgaaggcgagcc 28371547 Query: 451 ggccctccgggcacttgc 468 | ||||| |||||||||| Sbjct: 28371546 gcccctcggggcacttgc 28371529 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 251 gccgtccgcctgcagcagcgccagcagcttcgccac 286 ||||||||||||||||| | ||||||||||||||| Sbjct: 20001249 gccgtccgcctgcagcaccagcagcagcttcgccac 20001284
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 264 bits (133), Expect = 2e-67 Identities = 285/335 (85%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtact---gc 191 ||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||| || Sbjct: 115554 gatcagttgagaaatttgaggtagtccttgaggtccgtggggaagcaagggtactactgc 115613 Query: 192 ctccagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgag 251 |||||||||||||||||| | | |||||| ||||| |||| |||||||||||||||||| Sbjct: 115614 ctccagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgag 115673 Query: 252 ccgtccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtcc 311 | ||| |||||| |||||||||||||||||||||| |||||| | |||||||||| ||| Sbjct: 115674 ctctccacctgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctcc 115733 Query: 312 agcaccctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagc 371 ||||||||||| | ||| | ||||||| ||||||||||||||||||||| |||||| Sbjct: 115734 agcaccctctcggcgggggtgggggcgcacgccaccagccacagcacgttgacggccagc 115793 Query: 372 ctcgtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccg 431 |||||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || |||||| Sbjct: 115794 ctcgtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccg 115853 Query: 432 tgctccccgaacgcgagccggccctccgggcactt 466 |||| |||| || ||||| ||||| |||||||| Sbjct: 115854 tgctaggcgaaggccagccgcccctcggggcactt 115888
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 264 bits (133), Expect = 2e-67 Identities = 285/335 (85%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtact---gc 191 ||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||| || Sbjct: 34174 gatcagttgagaaatttgaggtagtccttgaggtccgtggggaagcaagggtactactgc 34233 Query: 192 ctccagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgag 251 |||||||||||||||||| | | |||||| ||||| |||| |||||||||||||||||| Sbjct: 34234 ctccagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgag 34293 Query: 252 ccgtccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtcc 311 | ||| |||||| |||||||||||||||||||||| |||||| | |||||||||| ||| Sbjct: 34294 ctctccacctgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctcc 34353 Query: 312 agcaccctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagc 371 ||||||||||| | ||| | ||||||| ||||||||||||||||||||| |||||| Sbjct: 34354 agcaccctctcggcgggggtgggggcgcacgccaccagccacagcacgttgacggccagc 34413 Query: 372 ctcgtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccg 431 |||||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || |||||| Sbjct: 34414 ctcgtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccg 34473 Query: 432 tgctccccgaacgcgagccggccctccgggcactt 466 |||| |||| || ||||| ||||| |||||||| Sbjct: 34474 tgctaggcgaaggccagccgcccctcggggcactt 34508
>dbj|AK110959.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A10, full insert sequence Length = 1334 Score = 264 bits (133), Expect = 2e-67 Identities = 285/335 (85%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 135 gatcacttgagaaatttgaggtagtccttgaggtcggcggggatgcaagggtact---gc 191 ||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||| || Sbjct: 467 gatcagttgagaaatttgaggtagtccttgaggtccgtggggaagcaagggtactactgc 526 Query: 192 ctccagaacgcgccgtgcaccctgagcatcctcaccaccttctccttggtcgacggcgag 251 |||||||||||||||||| | | |||||| ||||| |||| |||||||||||||||||| Sbjct: 527 ctccagaacgcgccgtgcgctcgcagcatcttcaccgccttgtccttggtcgacggcgag 586 Query: 252 ccgtccgcctgcagcagcgccagcagcttcgccacgccgccgctcgccaccatgtcgtcc 311 | ||| |||||| |||||||||||||||||||||| |||||| | |||||||||| ||| Sbjct: 587 ctctccacctgcatcagcgccagcagcttcgccacggcgccgcccaccaccatgtcctcc 646 Query: 312 agcaccctctccgtgggccgcgccgcgcacgacaccagccacagcacgttgaccgccagc 371 ||||||||||| | ||| | ||||||| ||||||||||||||||||||| |||||| Sbjct: 647 agcaccctctcggcgggggtgggggcgcacgccaccagccacagcacgttgacggccagc 706 Query: 372 ctcgtggccaggccggatacccgcagcaccgtccgcaccacggccgccacggcgagcccg 431 |||||||| || ||||| ||||| ||||| | ||| ||||||| ||||| || |||||| Sbjct: 707 ctcgtggcgagcccggacacccggagcacggcgcgcgccacggcggccaccgccagcccg 766 Query: 432 tgctccccgaacgcgagccggccctccgggcactt 466 |||| |||| || ||||| ||||| |||||||| Sbjct: 767 tgctaggcgaaggccagccgcccctcggggcactt 801
>ref|XM_467235.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1490 Score = 71.9 bits (36), Expect = 2e-09 Identities = 248/318 (77%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 151 tgaggtagtccttgaggtcggcggggatgcaagggtactgcctccagaacgcgccgtgca 210 ||||||||||| ||| ||||| |||| ||| | |||||||||||||| | ||||| | Sbjct: 1299 tgaggtagtccctgaagtcggtagggaagcacgcgtactgcctccagactaccccgtgga 1240 Query: 211 ccctgagcatcctcaccaccttctccttggtcgacggcgagccgtccgcctgcagcagcg 270 ||| | |||||||||| ||||| ||| ||||||||||||| || | || |||||| Sbjct: 1239 tcctaaccatcctcaccgtcttctgcttcgtcgacggcgagctctcgacgtggagcagcc 1180 Query: 271 ccagcagcttcgccacgccgccgctcgccaccatgtcgtccagcaccctctccgtgggcc 330 |||| |||||||| ||| ||||| || || |||||| || || ||| |||||| ||| Sbjct: 1179 ccaggagcttcgcgacggcgccggtcagcatcatgtcctcgaggaccttctccgacggcg 1120 Query: 331 gcgccgcgcacgacaccagccacagcacgttgaccgccagcctcgtggccaggccggata 390 | || || ||||| ||||||||||| ||||| || ||| ||||| ||| | || | Sbjct: 1119 ccaccacg---gacacgagccacagcaccttgacggcgagctgcgtggacagctccgaca 1063 Query: 391 cccgcagcaccgtccgcaccacggccgccacggcgagcccgtgctccccgaacgcgagcc 450 | ||||||| ||||| | ||||||||||||| | || |||||||| |||| ||||||| Sbjct: 1062 cgcgcagcatcgtcctcgccacggccgccaccgacaggtcgtgctccgcgaaggcgagcc 1003 Query: 451 ggccctccgggcacttgc 468 | ||||| |||||||||| Sbjct: 1002 gcccctcggggcacttgc 985
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 71.9 bits (36), Expect = 2e-09 Identities = 248/318 (77%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 151 tgaggtagtccttgaggtcggcggggatgcaagggtactgcctccagaacgcgccgtgca 210 ||||||||||| ||| ||||| |||| ||| | |||||||||||||| | ||||| | Sbjct: 163600 tgaggtagtccctgaagtcggtagggaagcacgcgtactgcctccagactaccccgtgga 163541 Query: 211 ccctgagcatcctcaccaccttctccttggtcgacggcgagccgtccgcctgcagcagcg 270 ||| | |||||||||| ||||| ||| ||||||||||||| || | || |||||| Sbjct: 163540 tcctaaccatcctcaccgtcttctgcttcgtcgacggcgagctctcgacgtggagcagcc 163481 Query: 271 ccagcagcttcgccacgccgccgctcgccaccatgtcgtccagcaccctctccgtgggcc 330 |||| |||||||| ||| ||||| || || |||||| || || ||| |||||| ||| Sbjct: 163480 ccaggagcttcgcgacggcgccggtcagcatcatgtcctcgaggaccttctccgacggcg 163421 Query: 331 gcgccgcgcacgacaccagccacagcacgttgaccgccagcctcgtggccaggccggata 390 | || || ||||| ||||||||||| ||||| || ||| ||||| ||| | || | Sbjct: 163420 ccaccacg---gacacgagccacagcaccttgacggcgagctgcgtggacagctccgaca 163364 Query: 391 cccgcagcaccgtccgcaccacggccgccacggcgagcccgtgctccccgaacgcgagcc 450 | ||||||| ||||| | ||||||||||||| | || |||||||| |||| ||||||| Sbjct: 163363 cgcgcagcatcgtcctcgccacggccgccaccgacaggtcgtgctccgcgaaggcgagcc 163304 Query: 451 ggccctccgggcacttgc 468 | ||||| |||||||||| Sbjct: 163303 gcccctcggggcacttgc 163286
>dbj|AK110831.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A04, full insert sequence Length = 1489 Score = 71.9 bits (36), Expect = 2e-09 Identities = 248/318 (77%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 151 tgaggtagtccttgaggtcggcggggatgcaagggtactgcctccagaacgcgccgtgca 210 ||||||||||| ||| ||||| |||| ||| | |||||||||||||| | ||||| | Sbjct: 1299 tgaggtagtccctgaagtcggtagggaagcacgcgtactgcctccagactaccccgtgga 1240 Query: 211 ccctgagcatcctcaccaccttctccttggtcgacggcgagccgtccgcctgcagcagcg 270 ||| | |||||||||| ||||| ||| ||||||||||||| || | || |||||| Sbjct: 1239 tcctaaccatcctcaccgtcttctgcttcgtcgacggcgagctctcgacgtggagcagcc 1180 Query: 271 ccagcagcttcgccacgccgccgctcgccaccatgtcgtccagcaccctctccgtgggcc 330 |||| |||||||| ||| ||||| || || |||||| || || ||| |||||| ||| Sbjct: 1179 ccaggagcttcgcgacggcgccggtcagcatcatgtcctcgaggaccttctccgacggcg 1120 Query: 331 gcgccgcgcacgacaccagccacagcacgttgaccgccagcctcgtggccaggccggata 390 | || || ||||| ||||||||||| ||||| || ||| ||||| ||| | || | Sbjct: 1119 ccaccacg---gacacgagccacagcaccttgacggcgagctgcgtggacagctccgaca 1063 Query: 391 cccgcagcaccgtccgcaccacggccgccacggcgagcccgtgctccccgaacgcgagcc 450 | ||||||| ||||| | ||||||||||||| | || |||||||| |||| ||||||| Sbjct: 1062 cgcgcagcatcgtcctcgccacggccgccaccgacaggtcgtgctccgcgaaggcgagcc 1003 Query: 451 ggccctccgggcacttgc 468 | ||||| |||||||||| Sbjct: 1002 gcccctcggggcacttgc 985
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 251 gccgtccgcctgcagcagcgccagcagcttcgccac 286 ||||||||||||||||| | ||||||||||||||| Sbjct: 105370 gccgtccgcctgcagcaccagcagcagcttcgccac 105405
>dbj|AK108494.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-G06, full insert sequence Length = 1643 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 251 gccgtccgcctgcagcagcgccagcagcttcgccac 286 ||||||||||||||||| | ||||||||||||||| Sbjct: 1322 gccgtccgcctgcagcaccagcagcagcttcgccac 1287
>gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosome 7, complete sequence Length = 189296 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgtacacacatgctcatgctca 47 |||||||||||||||||||||| Sbjct: 133497 tgtacacacatgctcatgctca 133518
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tccttgaggtcggcggggatgc 180 |||||||||||||||||||||| Sbjct: 3039822 tccttgaggtcggcggggatgc 3039843
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 268 gcgccagcagcttcgccacgccgccg 293 ||||||||||||||| |||||||||| Sbjct: 3107388 gcgccagcagcttcggcacgccgccg 3107363
>gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, complete sequence Length = 224041 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgtacacacatgctcatgctca 47 |||||||||||||||||||||| Sbjct: 208044 tgtacacacatgctcatgctca 208065
>gb|AC149593.5| Mus musculus BAC clone RP23-34O23 from 7, complete sequence Length = 231000 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgtacacacatgctcatgctca 47 |||||||||||||||||||||| Sbjct: 63668 tgtacacacatgctcatgctca 63689
>gb|BC033307.1| Homo sapiens mannosidase, alpha, class 2B, member 2, mRNA (cDNA clone MGC:24942 IMAGE:4932398), complete cds Length = 4174 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1215 cctgcagcagctccagcagcttcgc 1239
>gb|AY536252.1| Chlamydomonas reinhardtii chloroplast ATP-binding protein (Sabc) mRNA, complete cds; nuclear gene for chloroplast product Length = 2253 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 260 ctgcagcagcgccagcagcttcgccacgc 288 ||||| |||||||||||||| |||||||| Sbjct: 716 ctgcaccagcgccagcagctccgccacgc 688
>gb|AC182644.4| Pan troglodytes BAC clone CH251-64L5 from chromosome 4, complete sequence Length = 157801 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 agcatcctcaccaccttctcc 236 ||||||||||||||||||||| Sbjct: 87084 agcatcctcaccaccttctcc 87104
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 ttctccttggtcgacggcgag 251 ||||||||||||||||||||| Sbjct: 311744 ttctccttggtcgacggcgag 311724
>gb|BC094773.1| Homo sapiens mannosidase, alpha, class 2B, member 2, mRNA (cDNA clone MGC:104672 IMAGE:30531368), complete cds Length = 4199 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1246 cctgcagcagctccagcagcttcgc 1270
>emb|AL833071.2|HSM804382 Homo sapiens mRNA; cDNA DKFZp451A0519 (from clone DKFZp451A0519); complete cds Length = 4173 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1219 cctgcagcagctccagcagcttcgc 1243
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 caccgtccgcaccacggccgccacg 422 ||||||| ||||||||||||||||| Sbjct: 92285 caccgtcggcaccacggccgccacg 92309
>emb|CR857915.1| Pongo pygmaeus mRNA; cDNA DKFZp459L1030 (from clone DKFZp459L1030) Length = 3245 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1213 cctgcagcagctccagcagcttcgc 1237
>gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, complete sequence Length = 195576 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 64187 cctgcagcagctccagcagcttcgc 64211
>gb|AC018692.9| Homo sapiens BAC clone RP11-555K2 from 4, complete sequence Length = 189789 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 agcatcctcaccaccttctcc 236 ||||||||||||||||||||| Sbjct: 15884 agcatcctcaccaccttctcc 15864
>gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, complete sequence Length = 156378 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 agcatcctcaccaccttctcc 236 ||||||||||||||||||||| Sbjct: 63171 agcatcctcaccaccttctcc 63151
>dbj|AB023152.2| Homo sapiens mRNA for KIAA0935 protein, partial cds Length = 7720 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1205 cctgcagcagctccagcagcttcgc 1229
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cgccgctcgccaccatgtcgt 309 ||||||||||||||||||||| Sbjct: 4331091 cgccgctcgccaccatgtcgt 4331111
>ref|NM_015274.1| Homo sapiens mannosidase, alpha, class 2B, member 2 (MAN2B2), mRNA Length = 4242 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1245 cctgcagcagctccagcagcttcgc 1269
>emb|AL832232.1|HSM803539 Homo sapiens mRNA; cDNA DKFZp686F0253 (from clone DKFZp686F0253) Length = 4171 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 cctgcagcagcgccagcagcttcgc 283 ||||||||||| ||||||||||||| Sbjct: 1216 cctgcagcagctccagcagcttcgc 1240
>gb|AC154032.1| Drosophila melanogaster clone BACR16N23, complete sequence Length = 149839 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cagcctcgtggccaggccgg 387 |||||||||||||||||||| Sbjct: 74376 cagcctcgtggccaggccgg 74357
>gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome 16, complete sequence Length = 206814 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tacacacatgctcatgctca 47 |||||||||||||||||||| Sbjct: 86397 tacacacatgctcatgctca 86416
>ref|XM_469828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 1210 cggccgccacggcgagcccg 1191
>ref|XM_469830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1632 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 1223 cggccgccacggcgagcccg 1204
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcgccacgccgccgctcgcc 299 |||||||||||||||||||| Sbjct: 2612095 tcgccacgccgccgctcgcc 2612114
>ref|XM_525065.1| PREDICTED: Pan troglodytes similar to solute carrier family 30 (zinc transporter), member 10 isoform a; zinc transporter 8 (LOC469681), mRNA Length = 1458 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 450 ccgcctgcagcagcggcagcagct 473
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 ccgcaccacggccgccacggcgagcccg 431 |||| ||||| ||||||||||||||||| Sbjct: 19590 ccgccccacgcccgccacggcgagcccg 19617
>ref|XM_864150.1| PREDICTED: Bos taurus similar to Rap1 GTPase-activating protein 1 (Rap1GAP), transcript variant 2 (LOC532839), mRNA Length = 2985 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cagcgccagcagcttcgcca 285 |||||||||||||||||||| Sbjct: 1668 cagcgccagcagcttcgcca 1687
>ref|XM_612035.2| PREDICTED: Bos taurus similar to Rap1 GTPase-activating protein 1 (Rap1GAP), transcript variant 1 (LOC532839), mRNA Length = 2957 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cagcgccagcagcttcgcca 285 |||||||||||||||||||| Sbjct: 1668 cagcgccagcagcttcgcca 1687
>gb|AC010916.9| Drosophila melanogaster clone BACR11A04, complete sequence Length = 165458 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cagcctcgtggccaggccgg 387 |||||||||||||||||||| Sbjct: 54356 cagcctcgtggccaggccgg 54375
>ref|XM_415281.1| PREDICTED: Gallus gallus similar to KIAA1853 protein (LOC416989), mRNA Length = 3198 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 ccgtccgcctgcagcagcgccagcagct 279 |||||| ||| ||||||||||||||||| Sbjct: 3043 ccgtcctcctccagcagcgccagcagct 3070
>ref|NM_001004433.1| Homo sapiens solute carrier family 30, member 10 (SLC30A10), transcript variant 2, mRNA Length = 2907 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 661 ccgcctgcagcagcggcagcagct 684
>ref|NM_018713.2| Homo sapiens solute carrier family 30, member 10 (SLC30A10), transcript variant 1, mRNA Length = 2869 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 661 ccgcctgcagcagcggcagcagct 684
>gb|BC036078.1| Homo sapiens solute carrier family 30, member 10, mRNA (cDNA clone IMAGE:5288669), partial cds Length = 3176 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 183 ccgcctgcagcagcggcagcagct 206
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 30990986 cggccgccacggcgagcccg 30991005 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 30980423 cggccgccacggcgagcccg 30980404
>gb|AY212919.1| Homo sapiens zinc transporter 8 (ZNT8) mRNA, complete cds Length = 1955 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 612 ccgcctgcagcagcggcagcagct 635
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gtccgcaccacggccgccac 421 |||||||||||||||||||| Sbjct: 121559 gtccgcaccacggccgccac 121540
>ref|XM_546081.2| PREDICTED: Canis familiaris similar to solute carrier family 35, member F3 (LOC488963), mRNA Length = 1414 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gagccgtccgcctgcagcagcgcc 272 ||||||||||||||||| |||||| Sbjct: 145 gagccgtccgcctgcaggagcgcc 122
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 115641 cggccgccacggcgagcccg 115660 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 105078 cggccgccacggcgagcccg 105059
>gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, complete sequence Length = 205171 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 186120 ccgcctgcagcagcggcagcagct 186097
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gcctgcagcagcgccagcagcttc 281 |||||||| ||||||||||||||| Sbjct: 129718 gcctgcaggagcgccagcagcttc 129695
>emb|AL365207.17| Human DNA sequence from clone RP11-420O24 on chromosome 1 Contains a CpG island, complete sequence Length = 182679 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tcaatctgtacacacatgct 39 |||||||||||||||||||| Sbjct: 67237 tcaatctgtacacacatgct 67218
>emb|AL121829.30|HSJ697K14 Human DNA sequence from clone RP4-697K14 on chromosome 20 Contains the C20orf148 gene for a novel tyrosine kinase, the PTK6 gene for protein tyrosine kinase 6, a novel gene, the EEF1A2 gene for eukaryotic translation elongation factor 1 alpha 2, the 5' end of the KCNQ2 gene for potassium voltage-gated channel (KQT-like subfamily member 2), the gene for peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285)(FLJ00244, KIAA1769), the C20orf149 gene, the gene for novel protein MGC5356 (MGC5356), the gene for a novel protein (LOC200213), a novel gene and thirteen CpG islands, complete sequence Length = 113196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ccatcctcccgcttctctgt 105 |||||||||||||||||||| Sbjct: 20034 ccatcctcccgcttctctgt 20015
>emb|AL049760.26|HSRYR7CC1 Human DNA sequence from clone XX-PRYR7CC1 on chromosome 22, complete sequence Length = 119118 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccacgccgccgctcgcca 300 |||||||||||||||||||| Sbjct: 1755 cgccacgccgccgctcgcca 1774
>emb|BX248360.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 7/8 Length = 349659 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tgaccgccagcctcgtggcc 380 |||||||||||||||||||| Sbjct: 178015 tgaccgccagcctcgtggcc 178034
>gb|AC154513.2| Mus musculus BAC clone RP24-72F2 from chromosome 16, complete sequence Length = 197862 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tacacacatgctcatgctca 47 |||||||||||||||||||| Sbjct: 188400 tacacacatgctcatgctca 188419
>dbj|AK090806.1| Homo sapiens cDNA FLJ33487 fis, clone BRAMY2003538, weakly similar to ZINC TRANSPORTER 1 Length = 2692 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccgcctgcagcagcgccagcagct 279 ||||||||||||||| |||||||| Sbjct: 661 ccgcctgcagcagcggcagcagct 684
>ref|NM_166794.1| Drosophila melanogaster unc-13 CG2999-RB, transcript variant B (unc-13), mRNA Length = 10267 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cagcctcgtggccaggccgg 387 |||||||||||||||||||| Sbjct: 3867 cagcctcgtggccaggccgg 3886
>gb|AC093599.6| Homo sapiens BAC clone RP11-285C1 from 4, complete sequence Length = 187937 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tacacacatgctcatgctca 47 |||||||||||||||||||| Sbjct: 106477 tacacacatgctcatgctca 106458
>gb|AY965680.1| Eptatretus stoutii nonfunctional variable lymphocyte receptor A (VLRA) gene, complete sequence Length = 81648 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gcatcctcaccaccttctcc 236 |||||||||||||||||||| Sbjct: 14675 gcatcctcaccaccttctcc 14656
>ref|NM_057690.2| Drosophila melanogaster anachronism CG8084-RA (ana), mRNA Length = 2413 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 1004 gcagcaccgccagcagcttcgcca 1027
>gb|AY060249.1| Drosophila melanogaster GH07389 full length cDNA Length = 1703 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 276 gcagcaccgccagcagcttcgcca 299
>gb|S63815.1| Drosophila sp. neuroblast proliferation inhibitor (ana) mRNA, complete cds Length = 2428 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 1004 gcagcaccgccagcagcttcgcca 1027
>gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45A-45A, BAC clone BACR08E17, complete sequence Length = 178262 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 47408 gcagcaccgccagcagcttcgcca 47385
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 283 ccacgccgccgctcgccaccatgtcgtc 310 ||||||||||||| |||||| ||||||| Sbjct: 883797 ccacgccgccgctggccaccttgtcgtc 883770
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 caccacggccgccacggcgagccc 430 ||||||||||||| |||||||||| Sbjct: 12188990 caccacggccgccgcggcgagccc 12188967
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 31081509 cggccgccacggcgagcccg 31081528 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 31070946 cggccgccacggcgagcccg 31070927
>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone BACR10M14, complete sequence Length = 189757 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 2642 gcagcaccgccagcagcttcgcca 2665
>gb|AF163763.1|AF163763 Homo sapiens elongation factor 1 A-2 (EF1A-2) gene, complete cds Length = 12124 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccatcctcccgcttctctgt 105 |||||||||||||||||||| Sbjct: 9021 ccatcctcccgcttctctgt 9040
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 caccacggccgccacggcgagccc 430 ||||||||||||| |||||||||| Sbjct: 26012 caccacggccgccgcggcgagccc 25989
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468A12 Length = 143018 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 caccacggccgccacggcgagccc 430 ||||||||||||| |||||||||| Sbjct: 131779 caccacggccgccgcggcgagccc 131756
>dbj|AB015472.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAE1 Length = 54632 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aattttccctatatcaaaca 80 |||||||||||||||||||| Sbjct: 13566 aattttccctatatcaaaca 13585
>dbj|AK071136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078E19, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cggccgccacggcgagcccg 431 |||||||||||||||||||| Sbjct: 1240 cggccgccacggcgagcccg 1221
>dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008K20, full insert sequence Length = 1951 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 caccacggccgccacggcgagccc 430 ||||||||||||| |||||||||| Sbjct: 242 caccacggccgccgcggcgagccc 219
>gb|AF127082.1|AF127082 Myxococcus xanthus ATP-dependent protease proteolytic subunit ClpP (clpP), ATP-dependent protease ATPase subunit ClpX (clpX), prolyl endopeptidase precursor Pep (pep), ATP-dependent protease LonV (lonV), oligopeptide permease homolog OppA (oppA), oligopeptide permease homolog OppB (oppB), and oligopeptide permease homolog OppC (oppC) genes, complete cds Length = 10847 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 404 ccgcaccacggccgccacggcgagcccg 431 |||| ||||||| ||||||||||||||| Sbjct: 10241 ccgcgccacggcggccacggcgagcccg 10214
>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete sequence Length = 243313 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 9484 gcagcaccgccagcagcttcgcca 9507
>gb|AE003847.5| Drosophila melanogaster chromosome 4, section 4 of 5 of the complete sequence Length = 107108 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cagcctcgtggccaggccgg 387 |||||||||||||||||||| Sbjct: 91230 cagcctcgtggccaggccgg 91211
>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones DS05998, DS07727, DS05175, and DS01885, complete sequence Length = 204617 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcagcagcgccagcagcttcgcca 285 |||||| ||||||||||||||||| Sbjct: 39220 gcagcaccgccagcagcttcgcca 39197
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cctgcagcagcgccagcagc 278 |||||||||||||||||||| Sbjct: 4121080 cctgcagcagcgccagcagc 4121061 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 245 cggcgagccgtccgcctgcagcagcgcc 272 ||||| |||||||||||||| ||||||| Sbjct: 1904047 cggcgcgccgtccgcctgcaacagcgcc 1904020
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 cacgttgaccgccagcctcgtggc 379 |||||||| ||||||||||||||| Sbjct: 143432 cacgttgatcgccagcctcgtggc 143455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,752,004 Number of Sequences: 3902068 Number of extensions: 3752004 Number of successful extensions: 90581 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88577 Number of HSP's gapped (non-prelim): 1988 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
