ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart22b05 |
|---|---|
| Clone Library Name | barley_pub |
>DHEA_NICPL (O04937) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A)| Length = 411 Score = 108 bits (269), Expect = 1e-23 Identities = 50/63 (79%), Positives = 55/63 (87%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMW+EEKVN EL KYM AF ++K MC+S +CSLRMGAFTLGVNRVARAT LRG Sbjct: 349 VQNIQGFMWDEEKVNRELRKYMTKAFHNLKNMCQSHNCSLRMGAFTLGVNRVARATTLRG 408 Query: 322 WEA 314 WEA Sbjct: 409 WEA 411
>DHE2_ARATH (Q38946) Glutamate dehydrogenase 2 (EC 1.4.1.3) (GDH 2)| Length = 411 Score = 107 bits (267), Expect = 2e-23 Identities = 50/63 (79%), Positives = 54/63 (85%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMWEEEKVN+EL KYM AF +IK MC + C+LRMGAFTLGVNRVARAT LRG Sbjct: 349 VQNIQGFMWEEEKVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRG 408 Query: 322 WEA 314 WEA Sbjct: 409 WEA 411
>DHE3_VITVI (P52596) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 411 Score = 106 bits (265), Expect = 3e-23 Identities = 51/63 (80%), Positives = 54/63 (85%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMWEEEKVN EL KYM AF +IKAMC+S +CSLRMGAFTL VNRVA AT LRG Sbjct: 349 VQNIQGFMWEEEKVNNELQKYMTKAFHNIKAMCQSHNCSLRMGAFTLAVNRVACATTLRG 408 Query: 322 WEA 314 WEA Sbjct: 409 WEA 411
>DHE3_MAIZE (Q43260) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 411 Score = 103 bits (258), Expect = 2e-22 Identities = 47/63 (74%), Positives = 53/63 (84%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMW+EEKVN EL Y+ AF ++K MC+S C LRMGAFTLGVNRVARAT+LRG Sbjct: 349 VQNIQGFMWDEEKVNAELRTYITRAFGNVKQMCRSHSCDLRMGAFTLGVNRVARATVLRG 408 Query: 322 WEA 314 WEA Sbjct: 409 WEA 411
>DHEB_NICPL (Q9LEC8) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B)| Length = 411 Score = 103 bits (257), Expect = 3e-22 Identities = 47/63 (74%), Positives = 53/63 (84%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMW+EE+VN EL YMN F+ +K MCK+ +C LRMGAFTLGVNRVARAT LRG Sbjct: 349 VQNIQGFMWDEERVNTELKAYMNRGFKDVKDMCKTHNCDLRMGAFTLGVNRVARATTLRG 408 Query: 322 WEA 314 WEA Sbjct: 409 WEA 411
>DHE3_LYCES (P93541) Glutamate dehydrogenase (EC 1.4.1.3) (GDH) (Legdh1)| Length = 412 Score = 101 bits (252), Expect = 1e-21 Identities = 46/63 (73%), Positives = 53/63 (84%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMW+E+KVN EL YM F+ +K MCK+ +C LRMGAFTLGVNRVARAT+LRG Sbjct: 350 VQNIQGFMWDEKKVNDELKTYMTRGFKDVKDMCKTHNCDLRMGAFTLGVNRVARATVLRG 409 Query: 322 WEA 314 WEA Sbjct: 410 WEA 412
>DHE1_ARATH (Q43314) Glutamate dehydrogenase 1 (EC 1.4.1.3) (GDH 1)| Length = 411 Score = 100 bits (249), Expect = 2e-21 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMWEEEKVN EL YM +F+ +K MCK+ C LRMGAFTLGVNRVA+ATILRG Sbjct: 349 VQNIQGFMWEEEKVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILRG 408 Query: 322 WEA 314 W A Sbjct: 409 WGA 411
>DHE3_ARATH (Q9S7A0) Probable glutamate dehydrogenase 3 (EC 1.4.1.3) (GDH 3)| Length = 411 Score = 94.4 bits (233), Expect = 2e-19 Identities = 41/61 (67%), Positives = 49/61 (80%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNIQGFMW+EEKVN EL YM F+ +K MC++ C LRMGAFTLG+NRVA+AT +RG Sbjct: 349 VQNIQGFMWDEEKVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIRG 408 Query: 322 W 320 W Sbjct: 409 W 409
>GUDB_BACSU (P50735) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 426 Score = 55.8 bits (133), Expect = 6e-08 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QGF W EE+V +L K M +F +I M ++ +R+ A+ +GV ++A A+ RG Sbjct: 365 VQNNQGFYWSEEEVEEKLEKMMVKSFNNIYEMANNRRIDMRLAAYMVGVRKMAEASRFRG 424 Query: 322 W 320 W Sbjct: 425 W 425
>DHE2_STAAW (Q7A1B9) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+VN +L + + +AF I + +++ +R+ A+ +G+ R A A RG Sbjct: 353 VQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRG 412 Query: 322 W 320 W Sbjct: 413 W 413
>DHE2_STAAS (Q6GAW8) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+VN +L + + +AF I + +++ +R+ A+ +G+ R A A RG Sbjct: 353 VQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRG 412 Query: 322 W 320 W Sbjct: 413 W 413
>DHE2_STAAR (Q6GID0) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+VN +L + + +AF I + +++ +R+ A+ +G+ R A A RG Sbjct: 353 VQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRG 412 Query: 322 W 320 W Sbjct: 413 W 413
>DHE2_STAAN (Q7A6H8) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+VN +L + + +AF I + +++ +R+ A+ +G+ R A A RG Sbjct: 353 VQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRG 412 Query: 322 W 320 W Sbjct: 413 W 413
>DHE2_STAAM (Q99VD0) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+VN +L + + +AF I + +++ +R+ A+ +G+ R A A RG Sbjct: 353 VQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRG 412 Query: 322 W 320 W Sbjct: 413 W 413
>DHE2_STAAC (Q5HHC7) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 414 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+VN +L + + +AF I + +++ +R+ A+ +G+ R A A RG Sbjct: 353 VQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRG 412 Query: 322 W 320 W Sbjct: 413 W 413
>DHE2_BACSU (P39633) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 424 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN QG+ W EE+V +L M S+F+ I + +R+ A+ G+ + A A+ RG Sbjct: 363 VQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKVDMRLAAYMTGIRKSAEASRFRG 422 Query: 322 W 320 W Sbjct: 423 W 423
>DHE3_THEPR (O74024) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 419 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/61 (39%), Positives = 35/61 (57%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNI G+ W EE+V +L K M AF + K ++ +R A+ + V+RV +A RG Sbjct: 356 VQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIHMRDAAYVVAVSRVYQAMKDRG 415 Query: 322 W 320 W Sbjct: 416 W 416
>DHE3_PYRFU (P80319) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNI G+ W E+V L K M AF + + K ++ +R A+ + V RV +A + RG Sbjct: 357 VQNITGYYWTIEEVRERLDKKMTKAFYDVYNIAKEKNIHMRDAAYVVAVQRVYQAMLDRG 416 Query: 322 W 320 W Sbjct: 417 W 417
>DHE3_PYRAB (Q47950) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNI G+ W E+V +L K M AF + K ++ +R A+ + V RV +A + RG Sbjct: 357 VQNITGYYWTLEEVREKLDKKMTKAFYDVYNTAKEKNIHMRDAAYVVAVQRVYQAMLDRG 416 Query: 322 W 320 W Sbjct: 417 W 417
>DHE3_PYRHO (O52310) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 47.0 bits (110), Expect = 3e-05 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNI G+ W E+V L K M AF + K ++ +R A+ + V RV +A + RG Sbjct: 357 VQNITGYYWTLEEVRERLDKKMTKAFYDVYNTAKEKNIHMRDAAYVVAVQRVYQAMLDRG 416 Query: 322 W 320 W Sbjct: 417 W 417
>DHE3_PYREN (Q47951) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 45.1 bits (105), Expect = 1e-04 Identities = 22/61 (36%), Positives = 33/61 (54%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNI G+ W E+V +L K M AF + K ++ +R + + V RV +A + RG Sbjct: 357 VQNITGYYWTLEEVREKLDKKMTKAFYDVYNTAKEKNIHMRDADYVVAVQRVYQAMLDRG 416 Query: 322 W 320 W Sbjct: 417 W 417
>DHE2_CLODI (P27346) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 421 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN+ G+ W EE+V + M AF+ I + + + ++R A+ + +VA A LRG Sbjct: 360 VQNLYGYYWSEEEVEQKEEIAMVKAFESIWKIKEEYNVTMREAAYMHSIKKVAEAMKLRG 419 Query: 322 W 320 W Sbjct: 420 W 420
>DHE3_PYRKO (O59650) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/61 (36%), Positives = 30/61 (49%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQNI GF W E+ L M AF + K ++ +R A+ + V+RV A RG Sbjct: 357 VQNINGFYWTVEETRKRLDDKMTKAFWDVFNTHKEKNIHMRDAAYVVAVSRVYEAMKHRG 416 Query: 322 W 320 W Sbjct: 417 W 417
>DHE41_HALSA (P29051) NAD-specific glutamate dehydrogenase A (EC 1.4.1.2)| (NAD-GDH A) Length = 435 Score = 37.0 bits (84), Expect = 0.030 Identities = 19/60 (31%), Positives = 35/60 (58%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 +Q+I W E+VN EL M +A++ +K +++D + R A+ + ++R+A A RG Sbjct: 373 LQDINRRAWSLERVNDELEAEMQAAWRAVKDEYENRDVTWRDAAYIVALSRIAEAHEARG 432
>DHE4_SYNY3 (P54386) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) Length = 428 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN G W ++VN L + M +H+ + + D ++R A+ +NR++ A +G Sbjct: 361 VQNRSGLYWSAKEVNDRLKEKMVEEAEHVWNITQELDVNVRTAAYIHALNRLSEAMDAKG 420
>DHE2_PEPAS (P28997) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)| (NAD-GDH) Length = 421 Score = 33.5 bits (75), Expect = 0.33 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = -3 Query: 502 VQNIQGFMWEEEKVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRG 323 VQN G+ W E +V + M A + + A+ + +LR + + + A LRG Sbjct: 360 VQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVADEYNVTLREAVYMYAIKSIDVAMKLRG 419 Query: 322 W 320 W Sbjct: 420 W 420
>DHE3_AERPE (Q9YC65) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 423 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = -3 Query: 487 GFMWEEE---KVNMELHKYMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVARATILRGW 320 G++ +EE K+ ++ + + + + K ++ SLR A+ + V RV RA LRGW Sbjct: 364 GWITDEEALKKLEQKMVENTKTVITYWEKNLKPEENSLRDAAYMIAVERVFRAMKLRGW 422
>NDC1_DROME (Q9VCG4) Nucleoporin Ndc1| Length = 578 Score = 30.8 bits (68), Expect = 2.2 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = -3 Query: 442 YMNSAFQHIKAMCKSQDCSLRMGAFTLGVNRVA 344 Y+++ +QH+K C QDC + LG+ A Sbjct: 127 YLHTDYQHLKYKCYGQDCISAYNVYLLGIGMTA 159
>GLT12_MOUSE (Q8BGT9) Polypeptide N-acetylgalactosaminyltransferase 12 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 12) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 12) (Polypeptide GalNAc transferase 12) (GalNAc-T12) (pp-GaNTas Length = 576 Score = 29.3 bits (64), Expect = 6.3 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = +3 Query: 63 IQQL*RFTITQNWIAILGNPGQIIS*HKDQTHHLSCTPKIISTGLLPCRQLMMNLPNQ*W 242 + L R T+ +N IL G ++ HK + T K++ G P + N NQ W Sbjct: 512 VMDLCRETVPENQEFILQEDGTLV--HKHSRKCVEATEKVLDNGFAPYLRDCTNSDNQRW 569 Query: 243 WI*ELSS 263 + E S Sbjct: 570 FFKERMS 576 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,383,762 Number of Sequences: 219361 Number of extensions: 1876016 Number of successful extensions: 4037 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4035 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
