ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473381.1| Oryza sativa (japonica cultivar-group), predic... 218 1e-53
2dbj|AB189166.1| Oryza sativa (japonica cultivar-group) OsGDH2 mR... 218 1e-53
3dbj|AK063467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
5emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4,... 208 1e-50
6ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
7dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA... 155 2e-34
8dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
10dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
11dbj|AB236412.1| Brassica napus gdh2 gene for glutamate dehydroge... 74 5e-10
12dbj|AB066298.1| Brassica napus gdh2 mRNA for glutamate dehydroge... 74 5e-10
13ref|NM_120826.2| Arabidopsis thaliana GDH2 (GLUTAMATE DEHYDROGEN... 70 8e-09
14ref|NM_121822.2| Arabidopsis thaliana GDH1 (GLUTAMATE DEHYDROGEN... 70 8e-09
15gb|BT025561.1| Arabidopsis thaliana At5g18170 mRNA, complete cds 70 8e-09
16gb|AY049243.1| Arabidopsis thaliana AT5g18170/MRG7_13 mRNA, comp... 70 8e-09
17gb|AF386976.1|AF386976 Arabidopsis thaliana glutamate dehydrogen... 70 8e-09
18emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC... 70 8e-09
19gb|U53527.1|ATU53527 Arabidopsis thaliana glutamate dehydrogenas... 70 8e-09
20gb|U56635.1|ATU56635 Arabidopsis thaliana glutamate dehydrogenas... 70 8e-09
21gb|U37771.1|ATU37771 Arabidopsis thaliana glutamate dehydrogenas... 70 8e-09
22gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complet... 66 1e-07
23ref|NM_111262.1| Arabidopsis thaliana oxidoreductase AT3G03910 m... 62 2e-06
24emb|X86924.1|VVCSGDHGE V.vinifera mRNA for NAD(H) glutamate dehy... 60 7e-06
25dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 7e-06
26gb|AY681352.1| Lupinus luteus glutamate dehydrogenase 1 (GDH1) m... 56 1e-04
27ref|XM_469970.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
28ref|XM_507557.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
29ref|XM_507076.2| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
30gb|AY332470.1| Oryza sativa (japonica cultivar-group) glutamate ... 56 1e-04
31dbj|AB024962.1| Oryza sativa (japonica cultivar-group) GDH1 mRNA... 56 1e-04
32dbj|AK071839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
33gb|DQ497631.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB... 54 5e-04
34emb|AJ879896.1| Glycine max mRNA for glutamate dehydrogenase 2 (... 54 5e-04
35emb|AJ011096.2|AOF011096 Asparagus officinalis mRNA for glutamat... 54 5e-04
36gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 52 0.002
37gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
38gb|AY072535.1| Arabidopsis thaliana glutamate dehydrogenase 2 (T... 52 0.002
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
40gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC... 50 0.007
41gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC... 50 0.007
42emb|AJ303070.1|VVI303070 Vitis vinifera gdhA gene for NADH gluta... 50 0.007
43gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8... 50 0.007
44emb|AJ879895.1| Glycine max mRNA for glutamate dehydrogenase 1 (... 48 0.028
45gb|DQ497632.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB... 44 0.44
46emb|Z72909.1|SCYGR124W S.cerevisiae chromosome VII reading frame... 42 1.7
47emb|Z72908.1|SCYGR123C S.cerevisiae chromosome VII reading frame... 42 1.7
48emb|X83099.1|SCDNAORFS S.cerevisiae DNA for ORFs from chromosome... 42 1.7
49gb|AC100805.2| Homo sapiens chromosome 8, clone CTC-789J18, comp... 42 1.7
50gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence 42 1.7
51emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chr... 42 1.7
52dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.7
53ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (... 40 6.8
54gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosom... 40 6.8
55gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, com... 40 6.8
56emb|AL662819.5| Human DNA sequence from clone RP13-211P9 on chro... 40 6.8
57emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 i... 40 6.8
58gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Chi... 40 6.8
59gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, com... 40 6.8
60gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, comple... 40 6.8
61dbj|AK052152.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.8
62gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, compl... 40 6.8
63emb|AL929229.6| Zebrafish DNA sequence from clone CH211-1E14 in ... 40 6.8
64emb|CT025645.16| Mouse DNA sequence from clone RP23-233D21 on ch... 40 6.8
65emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chro... 40 6.8 
>ref|XM_473381.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1239

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
            |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| ||||||
Sbjct: 1239 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 1180

                                                                        
Query: 371  tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
             || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | 
Sbjct: 1179 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 1120

                                                                        
Query: 431  gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
              ||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct: 1119 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 1060

                          
Query: 491  aatgttctgaaccc 504
            ||||||||||||||
Sbjct: 1059 aatgttctgaaccc 1046
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>dbj|AB189166.1| Oryza sativa (japonica cultivar-group) OsGDH2 mRNA for glutamate
            dehydrogenase 2, complete cds
          Length = 1835

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
            |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| ||||||
Sbjct: 1483 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 1424

                                                                        
Query: 371  tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
             || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | 
Sbjct: 1423 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 1364

                                                                        
Query: 431  gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
              ||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct: 1363 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 1304

                          
Query: 491  aatgttctgaaccc 504
            ||||||||||||||
Sbjct: 1303 aatgttctgaaccc 1290
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>dbj|AK063467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H11, full
            insert sequence
          Length = 1884

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
            |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| ||||||
Sbjct: 1574 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 1515

                                                                        
Query: 371  tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
             || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | 
Sbjct: 1514 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 1455

                                                                        
Query: 431  gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
              ||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct: 1454 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 1395

                          
Query: 491  aatgttctgaaccc 504
            ||||||||||||||
Sbjct: 1394 aatgttctgaaccc 1381
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  208 bits (105), Expect = 1e-50
 Identities = 168/189 (88%)
 Strand = Plus / Minus

                                                                            
Query: 311      tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
                |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| ||||||
Sbjct: 27211222 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 27211163

                                                                            
Query: 371      tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
                 || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | 
Sbjct: 27211162 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 27211103

                                                                            
Query: 431      gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
                  ||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct: 27211102 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 27211043

                         
Query: 491      aatgttctg 499
                |||||||||
Sbjct: 27211042 aatgttctg 27211034
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>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03,
             complete sequence
          Length = 136656

 Score =  208 bits (105), Expect = 1e-50
 Identities = 168/189 (88%)
 Strand = Plus / Minus

                                                                         
Query: 311   tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
             |||||||||||| |||||||||| |||||| |||||||||||||| ||||||| ||||||
Sbjct: 42311 tcatgcctcccatcccctcaagagggtggcacgtgcaacccggttgactcccagggtgaa 42252

                                                                         
Query: 371   tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
              || |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| | 
Sbjct: 42251 cgcccccatcctcaggttgcaatcatgagatttacacatggccttgatgtgctggaaaga 42192

                                                                         
Query: 431   gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
               ||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct: 42191 attgttcatgtacttgtggagctccatgttcaccttctcctcatcccacatgaacccttg 42132

                      
Query: 491   aatgttctg 499
             |||||||||
Sbjct: 42131 aatgttctg 42123
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>ref|XM_467072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1424

 Score =  155 bits (78), Expect = 2e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
            |||||||||||| |||||||| |  || ||   |||||||||||| || ||||| |||||
Sbjct: 1352 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 1293

                                                                        
Query: 371  tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
            ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || ||
Sbjct: 1292 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 1233

                                                                        
Query: 431  gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
            | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| ||
Sbjct: 1232 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 1173

                          
Query: 491  aatgttctgaaccc 504
            ||||||||||||||
Sbjct: 1172 aatgttctgaaccc 1159
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>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate
            dehydrogenase 3, complete cds
          Length = 1452

 Score =  155 bits (78), Expect = 2e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
            |||||||||||| |||||||| |  || ||   |||||||||||| || ||||| |||||
Sbjct: 1378 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 1319

                                                                        
Query: 371  tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
            ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || ||
Sbjct: 1318 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 1259

                                                                        
Query: 431  gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
            | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| ||
Sbjct: 1258 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 1199

                          
Query: 491  aatgttctgaaccc 504
            ||||||||||||||
Sbjct: 1198 aatgttctgaaccc 1185
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>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full
            insert sequence
          Length = 1424

 Score =  155 bits (78), Expect = 2e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
            |||||||||||| |||||||| |  || ||   |||||||||||| || ||||| |||||
Sbjct: 1352 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 1293

                                                                        
Query: 371  tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
            ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || ||
Sbjct: 1292 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 1233

                                                                        
Query: 431  gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
            | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| ||
Sbjct: 1232 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 1173

                          
Query: 491  aatgttctgaaccc 504
            ||||||||||||||
Sbjct: 1172 aatgttctgaaccc 1159
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                            
Query: 311      tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
                |||||||||||| |||||||| |  || ||   |||||||||||| || ||||| |||||
Sbjct: 26261401 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 26261342

                                                                            
Query: 371      tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
                ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || ||
Sbjct: 26261341 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 26261282

                                                                            
Query: 431      gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
                | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| ||
Sbjct: 26261281 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 26261222

                         
Query: 491      aatgttctg 499
                |||||||||
Sbjct: 26261221 aatgttctg 26261213
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>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0012J10
          Length = 132375

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                         
Query: 311   tcatgcctcccagcccctcaagatggtggcgcgtgcaacccggttcactcccaaggtgaa 370
             |||||||||||| |||||||| |  || ||   |||||||||||| || ||||| |||||
Sbjct: 84242 tcatgcctcccatcccctcaacagagtagcctttgcaacccggttaacccccaaagtgaa 84183

                                                                         
Query: 371   tgctcccatcctaaggctgcaatcttgagacttgcacatggccttgatgtgctggaatgc 430
             ||| |||||||||||| |||| | ||| || ||||||||| ||||||||| ||| || ||
Sbjct: 84182 tgcccccatcctaaggttgcagttttgggatttgcacatgtccttgatgttctgaaaagc 84123

                                                                         
Query: 431   gctgttcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttg 490
             | | ||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||| ||
Sbjct: 84122 gttcttcatgtacttttggagctccctgttcaccttctcttcatcccacatgaagccctg 84063

                      
Query: 491   aatgttctg 499
             |||||||||
Sbjct: 84062 aatgttctg 84054
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>dbj|AB236412.1| Brassica napus gdh2 gene for glutamate dehydrogenase 2, complete cds
          Length = 3628

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                        
Query: 436  tcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttgaatgt 495
            |||| ||||| || ||||||| |||||| ||||| |||||||||||||| ||||||||||
Sbjct: 3428 tcatgtacttctgcagctccaggttcactttttcctcttcccacatgaacccttgaatgt 3369

                     
Query: 496  tctgaaccc 504
            |||| ||||
Sbjct: 3368 tctggaccc 3360
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>dbj|AB066298.1| Brassica napus gdh2 mRNA for glutamate dehydrogenase, complete cds
          Length = 1494

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                        
Query: 436  tcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttgaatgt 495
            |||| ||||| || ||||||| |||||| ||||| |||||||||||||| ||||||||||
Sbjct: 1223 tcatgtacttctgcagctccaggttcactttttcctcttcccacatgaacccttgaatgt 1164

                     
Query: 496  tctgaaccc 504
            |||| ||||
Sbjct: 1163 tctggaccc 1155
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>ref|NM_120826.2| Arabidopsis thaliana GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase
            AT5G07440 (GDH2) mRNA, complete cds
          Length = 1634

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 450  agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 1313 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcaccc 1259
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>ref|NM_121822.2| Arabidopsis thaliana GDH1 (GLUTAMATE DEHYDROGENASE 1); oxidoreductase
            AT5G18170 (GDH1) mRNA, complete cds
          Length = 1565

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 458  gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 1217 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccc 1171
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>gb|BT025561.1| Arabidopsis thaliana At5g18170 mRNA, complete cds
          Length = 1236

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 458  gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 1089 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccc 1043
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>gb|AY049243.1| Arabidopsis thaliana AT5g18170/MRG7_13 mRNA, complete cds
          Length = 1560

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 458  gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 1217 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccc 1171
to top
>gb|AF386976.1|AF386976 Arabidopsis thaliana glutamate dehydrogenase 2 (T2I1_150) mRNA,
            complete cds
          Length = 1686

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 450  agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 1379 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcaccc 1325
to top
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project)
          Length = 116763

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 450   agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
             ||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 73042 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcaccc 72988
to top
>gb|U53527.1|ATU53527 Arabidopsis thaliana glutamate dehydrogenase 1 (GDH1) mRNA, complete
            cds
          Length = 1514

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 458  gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 1188 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccc 1142
to top
>gb|U56635.1|ATU56635 Arabidopsis thaliana glutamate dehydrogenase 2 (GDH2) mRNA, complete
            cds
          Length = 1620

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 450  agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 1315 agctccaagttcactttttcctcttcccacatgaatccttgaatgttctgcaccc 1261
to top
>gb|U37771.1|ATU37771 Arabidopsis thaliana glutamate dehydrogenase 1 (GDH1) mRNA, complete
            cds
          Length = 1539

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 458  gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 1190 gttcaccttctcttcctcccacataaagccttgaatgttctgaaccc 1144
to top
>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence
          Length = 84869

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                         
Query: 436   tcatatacttgtggagctccatgttcaccttttcttcttcccacatgaagccttgaatgt 495
             |||| ||||| || ||||||| |||||| ||||| |||||||||||||| ||||| ||||
Sbjct: 42929 tcatgtacttttgcagctccaagttcactttttcctcttcccacatgaacccttgtatgt 42870

                      
Query: 496   tctgaaccc 504
             |||| ||||
Sbjct: 42869 tctgtaccc 42861
to top
>ref|NM_111262.1| Arabidopsis thaliana oxidoreductase AT3G03910 mRNA, complete cds
          Length = 1479

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 450  agctccatgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||| | ||||||||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 1168 agctccctattcaccttttcctcatcccacatgaatccttgtatgttctgaaccc 1114
to top
>emb|X86924.1|VVCSGDHGE V.vinifera mRNA for NAD(H) glutamate dehydrogenase
          Length = 1622

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 459  ttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||| |||||||||||||| || |||||||| ||||||||||
Sbjct: 1274 ttcaccttctcttcttcccacataaaaccttgaatattctgaaccc 1229
to top
>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7
          Length = 83948

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 458   gttcaccttttcttcttcccacatgaagccttgaatgttctg 499
             ||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 31607 gttcaccttctcttcctcccacataaagccttgaatgttctg 31566
to top
>gb|AY681352.1| Lupinus luteus glutamate dehydrogenase 1 (GDH1) mRNA, complete cds
          Length = 1405

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 1133 tgttcaccttctcttcatcccacatgaacccttgtatgttctgcaccc 1086
to top
>ref|XM_469970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1615

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| || || ||||||||||| || ||||||||||||||||
Sbjct: 1160 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaaccc 1113
to top
>ref|XM_507557.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.2
            mRNA
          Length = 1684

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| || || ||||||||||| || ||||||||||||||||
Sbjct: 1229 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaaccc 1182
to top
>ref|XM_507076.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.2
            mRNA
          Length = 1617

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| || || ||||||||||| || ||||||||||||||||
Sbjct: 1162 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaaccc 1115
to top
>gb|AY332470.1| Oryza sativa (japonica cultivar-group) glutamate dehydrogenase (GDH)
            mRNA, complete cds
          Length = 1416

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| || || ||||||||||| || ||||||||||||||||
Sbjct: 1160 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaaccc 1113
to top
>dbj|AB024962.1| Oryza sativa (japonica cultivar-group) GDH1 mRNA for glutamate
            dehydrogenase 1, complete cds
          Length = 1550

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| || || ||||||||||| || ||||||||||||||||
Sbjct: 1103 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaaccc 1056
to top
>dbj|AK071839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121E06, full
            insert sequence
          Length = 1682

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||| || || ||||||||||| || ||||||||||||||||
Sbjct: 1230 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaaccc 1183
to top
>gb|DQ497631.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB) mRNA, complete cds
          Length = 1460

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 474  tcccacatgaagccttgaatgttctgaaccc 504
            ||||||||||| |||||||||||||||||||
Sbjct: 1073 tcccacatgaaaccttgaatgttctgaaccc 1043
to top
>emb|AJ879896.1| Glycine max mRNA for glutamate dehydrogenase 2 (gdh2 gene)
          Length = 1500

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 458  gttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            |||||| || ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1183 gttcactttctcttcatcccacatgaaaccttgaatattctgaaccc 1137
to top
>emb|AJ011096.2|AOF011096 Asparagus officinalis mRNA for glutamate dehydrogenase
          Length = 1681

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 462  accttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||| ||||| ||||||||||| ||||| |||||||||||||
Sbjct: 1257 accttctcttcatcccacatgaatccttggatgttctgaaccc 1215
to top
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence,
            complete sequence
          Length = 162497

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaac 502
            |||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 9321 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaac 9276
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 457      tgttcaccttttcttcttcccacatgaagccttgaatgttctgaac 502
                |||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 32734586 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaac 32734631
to top
>gb|AY072535.1| Arabidopsis thaliana glutamate dehydrogenase 2 (T2I1_150) mRNA,
            complete cds
          Length = 1173

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 471  tcttcccacatgaagccttgaatgttctgaaccc 504
            |||||||||||||| |||||||||||||| ||||
Sbjct: 1169 tcttcccacatgaatccttgaatgttctgcaccc 1136
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 457      tgttcaccttttcttcttcccacatgaagccttgaatgttctgaac 502
                |||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 32825096 tgttcaccttctcctcgtcccacatgaaaccctgaatgttctgaac 32825141
to top
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence,
            complete sequence
          Length = 101410

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                             
Query: 450  agctccatgttcaccttttcttcttcccacatgaagccttgaatgttct 498
            |||||| | ||||||||||| || ||||||||||| ||||| |||||||
Sbjct: 8324 agctccctattcaccttttcctcatcccacatgaatccttgtatgttct 8372
to top
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence,
            complete sequence
          Length = 63654

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 450  agctccatgttcaccttttcttcttcccacatgaagccttgaatgttct 498
            |||||| | ||||||||||| || ||||||||||| ||||| |||||||
Sbjct: 5348 agctccctattcaccttttcctcatcccacatgaatccttgtatgttct 5300
to top
>emb|AJ303070.1|VVI303070 Vitis vinifera gdhA gene for NADH glutamate dehydrogenase, exons 1-9
          Length = 3146

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 459  ttcaccttttcttcttcccacatgaagccttgaatgttctg 499
            |||||||| |||||||||||||| || |||||||| |||||
Sbjct: 2998 ttcaccttctcttcttcccacataaaaccttgaatattctg 2958
to top
>gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8D8 genomic sequence, complete
             sequence
          Length = 55021

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                              
Query: 450   agctccatgttcaccttttcttcttcccacatgaagccttgaatgttct 498
             ||||||| |||||| ||||| |||||||||||||| | |||||||||||
Sbjct: 15033 agctccaagttcactttttcctcttcccacatgaa-ctttgaatgttct 15080
to top
>emb|AJ879895.1| Glycine max mRNA for glutamate dehydrogenase 1 (gdh1 gene)
          Length = 1635

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 457  tgttcaccttttcttcttcccacatgaagccttgaatgttctgaaccc 504
            ||||||| || || || ||||||||||| ||||| |||||||||||||
Sbjct: 1252 tgttcactttctcctcatcccacatgaaaccttggatgttctgaaccc 1205
to top
>gb|DQ497632.1| Vitis vinifera GDHB glutamate dehydrogenase (gdhB) gene, complete cds
          Length = 4013

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 474  tcccacatgaagccttgaatgttctg 499
            ||||||||||| ||||||||||||||
Sbjct: 3850 tcccacatgaaaccttgaatgttctg 3825
to top
>emb|Z72909.1|SCYGR124W S.cerevisiae chromosome VII reading frame ORF YGR124w
          Length = 4121

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 302  tggaactcatcatgcctccca 322
            |||||||||||||||||||||
Sbjct: 1212 tggaactcatcatgcctccca 1232
to top
>emb|Z72908.1|SCYGR123C S.cerevisiae chromosome VII reading frame ORF YGR123c
          Length = 4800

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 302  tggaactcatcatgcctccca 322
            |||||||||||||||||||||
Sbjct: 4272 tggaactcatcatgcctccca 4292
to top
>emb|X83099.1|SCDNAORFS S.cerevisiae DNA for ORFs from chromosome VII
          Length = 18258

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   tggaactcatcatgcctccca 322
             |||||||||||||||||||||
Sbjct: 10805 tggaactcatcatgcctccca 10825
to top
>gb|AC100805.2| Homo sapiens chromosome 8, clone CTC-789J18, complete sequence
          Length = 155955

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 458  gttcaccttttcttcttccca 478
            |||||||||||||||||||||
Sbjct: 1326 gttcaccttttcttcttccca 1346
to top
>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence
          Length = 160275

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 458   gttcaccttttcttcttccca 478
             |||||||||||||||||||||
Sbjct: 39491 gttcaccttttcttcttccca 39471
to top
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete
             sequence
          Length = 205184

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   ctaacataaagaccaaaccca 157
             |||||||||||||||||||||
Sbjct: 61560 ctaacataaagaccaaaccca 61540
to top
>dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L19, TM0070,
             complete sequence
          Length = 128164

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 457   tgttcaccttttcttcttcccacat 481
             ||||||||| |||||||||||||||
Sbjct: 27346 tgttcacctcttcttcttcccacat 27322
to top
>ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (DDB0189592), partial
           mRNA
          Length = 3192

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 58  taaacattcaacaactctga 77
           ||||||||||||||||||||
Sbjct: 396 taaacattcaacaactctga 377
to top
>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete
             sequence
          Length = 206191

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   aaacccatcatctgtcatgt 170
             ||||||||||||||||||||
Sbjct: 13695 aaacccatcatctgtcatgt 13676
to top
>gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, complete sequence
          Length = 174474

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   aaacccatcatctgtcatgt 170
             ||||||||||||||||||||
Sbjct: 42172 aaacccatcatctgtcatgt 42153
to top
>emb|AL662819.5| Human DNA sequence from clone RP13-211P9 on chromosome X Contains a
             novel pseudogene, complete sequence
          Length = 30493

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ttgaaaccaatgaggccaaa 21
             ||||||||||||||||||||
Sbjct: 19951 ttgaaaccaatgaggccaaa 19970
to top
>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9,
             complete sequence
          Length = 137898

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 187   caactggactcctcccatgccggcaact 214
             ||||| ||||||||||||||| ||||||
Sbjct: 99523 caacttgactcctcccatgccagcaact 99496
to top
>gb|AC131961.1| Drosophila pseudoobscura  FOSMID DPSF1-548A3 (Children's Hospital
            Oakland Research Institute Drosophila pseudoobscura
            FOSMID Library) complete sequence
          Length = 39990

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  tacttgtggagctccatgtt 460
            ||||||||||||||||||||
Sbjct: 9202 tacttgtggagctccatgtt 9221
to top
>gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, complete sequence
          Length = 200421

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   atgttcaccttttcttcttc 475
             ||||||||||||||||||||
Sbjct: 87127 atgttcaccttttcttcttc 87108
to top
>gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, complete sequence
          Length = 93879

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   aacttatgatgaatttacca 230
             ||||||||||||||||||||
Sbjct: 51650 aacttatgatgaatttacca 51669
to top
>dbj|AK052152.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330001E03 product:unclassifiable, full
            insert sequence
          Length = 4323

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 404  gcacatggccttgatgtgct 423
            ||||||||||||||||||||
Sbjct: 4046 gcacatggccttgatgtgct 4027
to top
>gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, complete sequence
          Length = 207184

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    tttcaactggactcctcccatgcc 207
              ||||||||||| ||||||||||||
Sbjct: 168543 tttcaactggagtcctcccatgcc 168520
to top
>emb|AL929229.6| Zebrafish DNA sequence from clone CH211-1E14 in linkage group 18,
             complete sequence
          Length = 184794

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    taaacattcaacaactctga 77
             ||||||||||||||||||||
Sbjct: 67303 taaacattcaacaactctga 67284
to top
>emb|CT025645.16| Mouse DNA sequence from clone RP23-233D21 on chromosome 13, complete
              sequence
          Length = 225179

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gcacatggccttgatgtgct 423
              ||||||||||||||||||||
Sbjct: 137800 gcacatggccttgatgtgct 137781
to top
>emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chromosome X, complete
             sequence
          Length = 190964

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 455   catgttcaccttttcttcttccca 478
             ||||||| ||||||||||||||||
Sbjct: 62225 catgttccccttttcttcttccca 62202


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,013,098
Number of Sequences: 3902068
Number of extensions: 5013098
Number of successful extensions: 106706
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106502
Number of HSP's gapped (non-prelim): 204
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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