ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart22b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds 462 e-127
2gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, com... 159 9e-36
3ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA 101 2e-18
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
7dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3... 101 2e-18
8dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds 101 2e-18
9gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence 66 1e-07
10gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-... 66 1e-07
11emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein 66 1e-07
12emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein 64 4e-07
13gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence 52 0.002
14gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker 52 0.002
15gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker 52 0.002
16gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein... 52 0.002
17gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein... 52 0.002
18gb|AY103580.1| Zea mays PCO072544 mRNA sequence 52 0.002
19gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 50 0.006
20emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 50 0.006
21emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 50 0.006
22emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complet... 48 0.025
23gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein... 48 0.025
24dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
25dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
26dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membra... 48 0.025
27dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membra... 48 0.025
28dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
29dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
30dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
31gb|AY107675.1| Zea mays PCO112712 mRNA sequence 48 0.025
32gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, co... 48 0.025
33gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, ... 48 0.025
34dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membran... 48 0.025
35dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for ... 48 0.025
36emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intri... 44 0.39
37gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Canc... 44 0.39
38gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from ... 44 0.39
39gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.5
40ref|NM_053924.1| Rattus norvegicus ATP-binding cassette, sub-fam... 42 1.5
41gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
42emb|CR702474.2|CNS0G4ZA Tetraodon nigroviridis full-length cDNA 42 1.5
43emb|CR702005.2|CNS0G4M9 Tetraodon nigroviridis full-length cDNA 42 1.5
44emb|CR701878.2|CNS0G4IQ Tetraodon nigroviridis full-length cDNA 42 1.5
45emb|CR700458.2|CNS0G3FA Tetraodon nigroviridis full-length cDNA 42 1.5
46emb|CR698963.2|CNS0G29R Tetraodon nigroviridis full-length cDNA 42 1.5
47emb|CR697642.2|CNS0G192 Tetraodon nigroviridis full-length cDNA 42 1.5
48emb|CR696608.2|CNS0G0GC Tetraodon nigroviridis full-length cDNA 42 1.5
49emb|CR694961.2|CNS0FZ6L Tetraodon nigroviridis full-length cDNA 42 1.5
50emb|CR693847.2|CNS0FYBN Tetraodon nigroviridis full-length cDNA 42 1.5
51emb|CR693583.2|CNS0FY4B Tetraodon nigroviridis full-length cDNA 42 1.5
52emb|CR693474.2|CNS0FY1A Tetraodon nigroviridis full-length cDNA 42 1.5
53emb|CR690780.2|CNS0FVYG Tetraodon nigroviridis full-length cDNA 42 1.5
54emb|CR689984.2|CNS0FVCC Tetraodon nigroviridis full-length cDNA 42 1.5
55emb|CR686426.2|CNS0FSLI Tetraodon nigroviridis full-length cDNA 42 1.5
56emb|CR685561.2|CNS0FRXH Tetraodon nigroviridis full-length cDNA 42 1.5
57emb|CR685520.2|CNS0FRWC Tetraodon nigroviridis full-length cDNA 42 1.5
58emb|CR684429.2|CNS0FR21 Tetraodon nigroviridis full-length cDNA 42 1.5
59gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.5
60emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for p... 42 1.5
61emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 i... 42 1.5
62emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp... 42 1.5
63gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.5
64gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, comple... 42 1.5
65dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
66emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in... 42 1.5
67gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.5
68emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in... 42 1.5
69dbj|AB020209.1| Rattus norvegicus mRNA for multidrug resistance ... 42 1.5
70ref|XM_476112.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
71gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.0
72ref|NM_187081.2| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
73gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.0
74gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.0
75gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
76gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Can... 40 6.0
77gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosom... 40 6.0
78gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124... 40 6.0
79gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome ... 40 6.0
80gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosom... 40 6.0
81gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.0
82emb|Y17691.1|XCT17691 Xanthomonas campestris Tn5044 transposon 40 6.0
83emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major... 40 6.0
84emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in... 40 6.0
85gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell... 40 6.0
86gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of... 40 6.0
87emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, co... 40 6.0
88gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.0
89dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
90emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 i... 40 6.0
91gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, r... 40 6.0
92gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Canc... 40 6.0
93gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosom... 40 6.0
94gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.0
95dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
96dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.0
97dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.0
98dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
99emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, ... 40 6.0
100dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
101dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
102dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
103emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 6.0
104gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55... 40 6.0
105gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 6.0
106emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on ch... 40 6.0
107gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.0
108emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chr... 40 6.0
109gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, compl... 40 6.0
110gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosom... 40 6.0 
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds
          Length = 1285

 Score =  462 bits (233), Expect = e-127
 Identities = 247/249 (99%), Gaps = 2/249 (0%)
 Strand = Plus / Minus

                                                                        
Query: 42   aattcgatcgtcgtcccttctt-aataataatttacatacatatgcacgctggattaaat 100
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1285 aattcgatcgtcgtcccttctttaataataatttacatacatatgcacgctggattaaat 1226

                                                                        
Query: 101  ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 1166

                                                                        
Query: 161  tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 1106

                                                                        
Query: 221  gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacg-tacgcgc 279
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1105 gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacgttacgcgc 1046

                     
Query: 280  gcaccagca 288
            |||||||||
Sbjct: 1045 gcaccagca 1037



 Score =  283 bits (143), Expect = 2e-73
 Identities = 143/143 (100%)
 Strand = Plus / Minus

                                                                        
Query: 306  atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagactgattggt 365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagactgattggt 960

                                                                        
Query: 366  ccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgc 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  ccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgc 900

                                   
Query: 426  cagcgccgcgccgatgaacggtc 448
            |||||||||||||||||||||||
Sbjct: 899  cagcgccgcgccgatgaacggtc 877
to top
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds
          Length = 1248

 Score =  159 bits (80), Expect = 9e-36
 Identities = 130/145 (89%), Gaps = 5/145 (3%)
 Strand = Plus / Minus

                                                                        
Query: 306  atgatcggtcgacgatgaacagcgataagattcca----tccatggccgcccagactgat 361
            ||||||| |||||||||||||||||||||||||||    ||||||| || | ||||||||
Sbjct: 1007 atgatcgatcgacgatgaacagcgataagattccacccgtccatggtcggc-agactgat 949

                                                                        
Query: 362  tggtccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcg 421
            |||   ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 948  tggctgactagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatgg 889

                                     
Query: 422  ccgccagcgccgcgccgatgaacgg 446
            ||||||||||||| |||||||||||
Sbjct: 888  ccgccagcgccgcaccgatgaacgg 864



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 64/72 (88%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 38   aattaattcgatcgtcgtcccttcttaat-aataatttacatacatatgcacgctggatt 96
            |||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||   ||
Sbjct: 1248 aattaactcgatcgacgttccttcttaattaataatttacatacatatgcacgctccgtt 1189

                        
Query: 97   aaatggcgtgcg 108
            |||| |||||||
Sbjct: 1188 aaatcgcgtgcg 1177



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 189  gacgctgccggcaggcacacacaccgaggagag 221
            ||||||| |||||||||||||||||||||||||
Sbjct: 1111 gacgctgtcggcaggcacacacaccgaggagag 1079



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  aactcgcagacttgaacagg 187
            ||||||||||||||||||||
Sbjct: 1142 aactcgcagacttgaacagg 1123
to top
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1319

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 376  cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 435
            ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 1012 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 953

                       
Query: 436  ccgatgaacgg 446
            |||||||||||
Sbjct: 952  ccgatgaacgg 942
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                            
Query: 376      cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 435
                ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 35369407 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 35369348

                           
Query: 436      ccgatgaacgg 446
                |||||||||||
Sbjct: 35369347 ccgatgaacgg 35369337



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                            
Query: 378      gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
                ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 27065642 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 27065583
to top
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C04
          Length = 103194

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 376   cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 435
             ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 29955 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 29896

                        
Query: 436   ccgatgaacgg 446
             |||||||||||
Sbjct: 29895 ccgatgaacgg 29885
to top
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full
            insert sequence
          Length = 1318

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 376  cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 435
            ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 1011 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 952

                       
Query: 436  ccgatgaacgg 446
            |||||||||||
Sbjct: 951  ccgatgaacgg 941
to top
>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and
            complete cds
          Length = 5325

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 376  cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 435
            ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 4910 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 4851

                       
Query: 436  ccgatgaacgg 446
            |||||||||||
Sbjct: 4850 ccgatgaacgg 4840
to top
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds
          Length = 1403

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 376 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 435
           ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 989 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 930

                      
Query: 436 ccgatgaacgg 446
           |||||||||||
Sbjct: 929 ccgatgaacgg 919
to top
>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence
          Length = 698

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 379 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 438
           |||||||| |||||||||||||| | ||||  ||||||||| || |||||||| ||||||
Sbjct: 426 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 367

                
Query: 439 atgaa 443
           |||||
Sbjct: 366 atgaa 362
to top
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete
           cds
          Length = 1086

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 379 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 438
           |||||||| |||||||||||||| | ||||  ||||||||| || |||||||| ||||||
Sbjct: 857 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 798

                
Query: 439 atgaa 443
           |||||
Sbjct: 797 atgaa 793
to top
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein
          Length = 1169

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 379 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 438
           |||||||| |||||||||||||| | ||||  ||||||||| || |||||||| ||||||
Sbjct: 914 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 855

                
Query: 439 atgaa 443
           |||||
Sbjct: 854 atgaa 850
to top
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 380 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 439
           ||||||| |||||||| ||||| ||||||  ||||||||| || |||||||| |||||||
Sbjct: 926 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 867

               
Query: 440 tgaa 443
           ||||
Sbjct: 866 tgaa 863
to top
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence
          Length = 1154

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 820 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 761

                 
Query: 438 gatgaa 443
           ||||||
Sbjct: 760 gatgaa 755
to top
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker
          Length = 824

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 258 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 317

                 
Query: 438 gatgaa 443
           ||||||
Sbjct: 318 gatgaa 323
to top
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker
          Length = 763

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 519 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 460

                 
Query: 438 gatgaa 443
           ||||||
Sbjct: 459 gatgaa 454
to top
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete
           cds
          Length = 1153

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 970 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 911

                 
Query: 438 gatgaa 443
           ||||||
Sbjct: 910 gatgaa 905
to top
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete
           cds
          Length = 1296

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 965 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 906

                 
Query: 438 gatgaa 443
           ||||||
Sbjct: 905 gatgaa 900
to top
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence
          Length = 1633

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 378  gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
            ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 1294 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 1235

                  
Query: 438  gatgaa 443
            ||||||
Sbjct: 1234 gatgaa 1229
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 398    tgatcaccaccacgtggtagatcgccgccagcgccgc 434
              |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 685604 tgatcaccgccacgaggtagatcgccgccagcaccgc 685640
to top
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 398    tgatcaccaccacgtggtagatcgccgccagcgccgc 434
              |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 342248 tgatcaccgccacgaggtagatcgccgccagcaccgc 342284
to top
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             3/14
          Length = 320050

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 398   tgatcaccaccacgtggtagatcgccgccagcgccgc 434
             |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 18398 tgatcaccgccacgaggtagatcgccgccagcaccgc 18434
to top
>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS
          Length = 1139

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 885 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 826
to top
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete
           cds
          Length = 1338

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 376 cggctcttgaaggggatcgccctgatcaccaccacgtggtagat 419
           ||||||||||||||||  |||||||| |  ||||||||||||||
Sbjct: 932 cggctcttgaaggggagggccctgatgatgaccacgtggtagat 889
to top
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 378   gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
             ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 37291 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 37232
to top
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 378    gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
              ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 118844 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 118785
to top
>dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membrane intrinsic
           protein, complete cds
          Length = 1223

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 381 cttgaaggggatcgccctgatcaccaccacgtggta 416
           |||||| ||||| ||||||||||| |||||||||||
Sbjct: 944 cttgaaagggatggccctgatcacaaccacgtggta 909
to top
>dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membrane intrinsic
           protein, complete cds
          Length = 1260

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 381 cttgaaggggatcgccctgatcaccaccacgtggta 416
           |||||| ||||| ||||||||||| |||||||||||
Sbjct: 948 cttgaaagggatggccctgatcacaaccacgtggta 913
to top
>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full
           insert sequence
          Length = 1128

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
to top
>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full
           insert sequence
          Length = 1205

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 973 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 914
to top
>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full
           insert sequence
          Length = 1136

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
to top
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence
          Length = 791

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 376 cggctcttgaaggggatcgccctgatcaccaccacgtggtagat 419
           ||||||||||||||||  |||||||| |  ||||||||||||||
Sbjct: 365 cggctcttgaaggggagggccctgatgatgaccacgtggtagat 322
to top
>gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, complete cds
          Length = 1298

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 381 cttgaaggggatcgccctgatcaccaccacgtggta 416
           ||||||||| || |||||||||||||| ||||||||
Sbjct: 916 cttgaagggaatggccctgatcaccacgacgtggta 881
to top
>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1140

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 913 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 854
to top
>dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membrane intrinsic protein
            1-1, complete cds
          Length = 1351

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 381  cttgaaggggatcgccctgatcaccaccacgtggta 416
            |||||| ||||| ||||||||||| |||||||||||
Sbjct: 1085 cttgaaagggatggccctgatcacaaccacgtggta 1050
to top
>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel
           protein, complete cds
          Length = 1116

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 378 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 437
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 916 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 857
to top
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene)
          Length = 1364

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 374 cgcggctcttgaaggggatcgccctgatcaccaccacgtggtagat 419
           ||||||||||||| ||||  |||||||| |  ||||||||||||||
Sbjct: 943 cgcggctcttgaaagggagggccctgatgatgaccacgtggtagat 898
to top
>gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 174309

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 63    taataataatttacatacatat 84
             ||||||||||||||||||||||
Sbjct: 29491 taataataatttacatacatat 29512
to top
>gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from clone y414a
          Length = 40121

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 419   tcgccgccagcgccgcgccgat 440
             ||||||||||||||||||||||
Sbjct: 32612 tcgccgccagcgccgcgccgat 32633
to top
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete
             sequence
          Length = 109794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    ataatttacatacatatgcac 88
             |||||||||||||||||||||
Sbjct: 95031 ataatttacatacatatgcac 95011
to top
>ref|NM_053924.1| Rattus norvegicus ATP-binding cassette, sub-family C (CFTR/MRP),
            member 5 (Abcc5), mRNA
          Length = 5744

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 391  atcgccctgatcaccaccacg 411
            |||||||||||||||||||||
Sbjct: 3461 atcgccctgatcaccaccacg 3481
to top
>gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_F05,
             complete sequence
          Length = 119573

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 63    taataataatttacatacatatgca 87
             ||||||||| |||||||||||||||
Sbjct: 27479 taataataacttacatacatatgca 27503
to top
>emb|CR702474.2|CNS0G4ZA Tetraodon nigroviridis full-length cDNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
to top
>emb|CR702005.2|CNS0G4M9 Tetraodon nigroviridis full-length cDNA
          Length = 970

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
to top
>emb|CR701878.2|CNS0G4IQ Tetraodon nigroviridis full-length cDNA
          Length = 934

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 30  gggaaagtagtacagcaggta 10
to top
>emb|CR700458.2|CNS0G3FA Tetraodon nigroviridis full-length cDNA
          Length = 965

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
to top
>emb|CR698963.2|CNS0G29R Tetraodon nigroviridis full-length cDNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
to top
>emb|CR697642.2|CNS0G192 Tetraodon nigroviridis full-length cDNA
          Length = 961

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 56  gggaaagtagtacagcaggta 36
to top
>emb|CR696608.2|CNS0G0GC Tetraodon nigroviridis full-length cDNA
          Length = 967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 62  gggaaagtagtacagcaggta 42
to top
>emb|CR694961.2|CNS0FZ6L Tetraodon nigroviridis full-length cDNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
to top
>emb|CR693847.2|CNS0FYBN Tetraodon nigroviridis full-length cDNA
          Length = 964

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 63  gggaaagtagtacagcaggta 43
to top
>emb|CR693583.2|CNS0FY4B Tetraodon nigroviridis full-length cDNA
          Length = 964

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 63  gggaaagtagtacagcaggta 43
to top
>emb|CR693474.2|CNS0FY1A Tetraodon nigroviridis full-length cDNA
          Length = 934

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 50  gggaaagtagtacagcaggta 30
to top
>emb|CR690780.2|CNS0FVYG Tetraodon nigroviridis full-length cDNA
          Length = 967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 62  gggaaagtagtacagcaggta 42
to top
>emb|CR689984.2|CNS0FVCC Tetraodon nigroviridis full-length cDNA
          Length = 935

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 30  gggaaagtagtacagcaggta 10
to top
>emb|CR686426.2|CNS0FSLI Tetraodon nigroviridis full-length cDNA
          Length = 960

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 55  gggaaagtagtacagcaggta 35
to top
>emb|CR685561.2|CNS0FRXH Tetraodon nigroviridis full-length cDNA
          Length = 961

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 55  gggaaagtagtacagcaggta 35
to top
>emb|CR685520.2|CNS0FRWC Tetraodon nigroviridis full-length cDNA
          Length = 964

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
to top
>emb|CR684429.2|CNS0FR21 Tetraodon nigroviridis full-length cDNA
          Length = 975

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 gggaaagtagtacagcaggta 154
           |||||||||||||||||||||
Sbjct: 68  gggaaagtagtacagcaggta 48
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 420     cgccgccagcgccgcgccgat 440
               |||||||||||||||||||||
Sbjct: 2953569 cgccgccagcgccgcgccgat 2953589
to top
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin
          Length = 1291

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 411  gtggtagatcgccgccagcgccgcgccgatgaa 443
            ||||||||| || |||||||| |||||||||||
Sbjct: 1288 gtggtagatggcggccagcgcggcgccgatgaa 1256
to top
>emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 in linkage group 10,
             complete sequence
          Length = 167226

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    taataataatttacatacata 83
             |||||||||||||||||||||
Sbjct: 60087 taataataatttacatacata 60107
to top
>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene)
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 380 tcttgaaggggatcgccctgatcaccaccacgtggta 416
           ||||||| ||||| || |||||||||||||| |||||
Sbjct: 841 tcttgaatgggatagctctgatcaccaccacatggta 805
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 420     cgccgccagcgccgcgccgat 440
               |||||||||||||||||||||
Sbjct: 4187442 cgccgccagcgccgcgccgat 4187462
to top
>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence
          Length = 125133

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    ataatttacatacatatgcac 88
             |||||||||||||||||||||
Sbjct: 18615 ataatttacatacatatgcac 18635
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 63       taataataatttacatacatatgca 87
                ||||||||| |||||||||||||||
Sbjct: 15861488 taataataacttacatacatatgca 15861464



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     gccgcggctcttgaagggga 391
               ||||||||||||||||||||
Sbjct: 6211026 gccgcggctcttgaagggga 6211045
to top
>emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in linkage group 22,
             complete sequence
          Length = 164475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    aataataatttacatacatat 84
             |||||||||||||||||||||
Sbjct: 30255 aataataatttacatacatat 30275
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 186     ggcgacgctgccggcaggcac 206
               |||||||||||||||||||||
Sbjct: 2595820 ggcgacgctgccggcaggcac 2595840
to top
>emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in linkage group 10,
             complete sequence
          Length = 160621

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    taataataatttacatacata 83
             |||||||||||||||||||||
Sbjct: 47614 taataataatttacatacata 47634
to top
>dbj|AB020209.1| Rattus norvegicus mRNA for multidrug resistance protein (MRP5),
            complete cds
          Length = 5744

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 391  atcgccctgatcaccaccacg 411
            |||||||||||||||||||||
Sbjct: 3461 atcgccctgatcaccaccacg 3481
to top
>ref|XM_476112.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 gccgcggctcttgaagggga 391
           ||||||||||||||||||||
Sbjct: 354 gccgcggctcttgaagggga 335
to top
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   gatcgccgccagcgccgcgc 436
             ||||||||||||||||||||
Sbjct: 93532 gatcgccgccagcgccgcgc 93513
to top
>ref|NM_187081.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 411 gtggtagatcgccgccagcgccgcgccgatgaacgg 446
           |||||| | |||||| | ||||||||||||||||||
Sbjct: 898 gtggtacagcgccgcgatcgccgcgccgatgaacgg 863
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cgccgccagcgccgcgccga 439
               ||||||||||||||||||||
Sbjct: 2703938 cgccgccagcgccgcgccga 2703957
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    gatcgccgccagcgccgcgccgat 440
              |||| |||||||||||||||||||
Sbjct: 708311 gatctccgccagcgccgcgccgat 708334
to top
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12,
             complete sequence
          Length = 172647

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   gccgcggctcttgaagggga 391
             ||||||||||||||||||||
Sbjct: 41381 gccgcggctcttgaagggga 41400
to top
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216676

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cagatttgagaactattaca 245
             ||||||||||||||||||||
Sbjct: 46344 cagatttgagaactattaca 46325
to top
>gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosome 16, complete
             sequence
          Length = 199601

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tgcgtggtactggtacaatg 124
             ||||||||||||||||||||
Sbjct: 64904 tgcgtggtactggtacaatg 64885
to top
>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4,
            complete sequence
          Length = 183648

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   taataataatttacatacat 82
            ||||||||||||||||||||
Sbjct: 3763 taataataatttacatacat 3744
to top
>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence
          Length = 233904

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 62     ttaataataatttacatacatatg 85
              ||||||||||| ||||||||||||
Sbjct: 205619 ttaataataatatacatacatatg 205596
to top
>gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosome 9, complete sequence
          Length = 209835

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    tgcgtggtactggtacaatg 124
              ||||||||||||||||||||
Sbjct: 199385 tgcgtggtactggtacaatg 199366
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 423     cgccagcgccgcgccgatga 442
               ||||||||||||||||||||
Sbjct: 4160264 cgccagcgccgcgccgatga 4160245
to top
>emb|Y17691.1|XCT17691 Xanthomonas campestris Tn5044 transposon
          Length = 10840

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 420 cgccgccagcgccgcgccgatgaa 443
           |||| |||||||||||||||||||
Sbjct: 882 cgccaccagcgccgcgccgatgaa 859
to top
>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2
          Length = 1189

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 381 cttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgat 440
           |||||| || || ||||| ||||| ||||||||||| |  || || ||||| ||||||||
Sbjct: 920 cttgaatggaatggcccttatcacaaccacgtggtaaagtgcggcgagcgctgcgccgat 861

                   
Query: 441 gaacggtc 448
           ||| ||||
Sbjct: 860 gaatggtc 853
to top
>emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in linkage group 5,
             complete sequence
          Length = 72481

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttcttaataataatttacat 78
             ||||||||||||||||||||
Sbjct: 25089 ttcttaataataatttacat 25108
to top
>gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     taataataatttacatacat 82
              ||||||||||||||||||||
Sbjct: 100924 taataataatttacatacat 100943
to top
>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome
          Length = 11137

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 410  cgtggtagatcgccgccagcgccgcgcc 437
            |||||||||||| |||||||| ||||||
Sbjct: 9054 cgtggtagatcggcgccagcggcgcgcc 9081
to top
>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence
          Length = 207067

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 420    cgccgccagcgccgcgccgatgaa 443
              |||| |||||||||||||||||||
Sbjct: 174840 cgccaccagcgccgcgccgatgaa 174817
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     tcgccgccagcgccgcgccg 438
               ||||||||||||||||||||
Sbjct: 4115711 tcgccgccagcgccgcgccg 4115730
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 411      gtggtagatcgccgccagcgccgcgccgatgaacgg 446
                |||||| | |||||| | ||||||||||||||||||
Sbjct: 15306495 gtggtacagcgccgcgatcgccgcgccgatgaacgg 15306460
to top
>emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 in linkage group 3,
             complete sequence
          Length = 190220

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    taataataatttacatacat 82
             ||||||||||||||||||||
Sbjct: 69241 taataataatttacatacat 69260
to top
>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone
              BACR48C05, complete sequence
          Length = 164450

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     tacatacatatgcacgctgg 93
              ||||||||||||||||||||
Sbjct: 141958 tacatacatatgcacgctgg 141939
to top
>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 184696

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   cagatttgagaactattaca 245
             ||||||||||||||||||||
Sbjct: 18168 cagatttgagaactattaca 18187
to top
>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete
             sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    ttaataataatttacatacatatg 85
             ||||||||||| ||||||||||||
Sbjct: 83579 ttaataataatatacatacatatg 83602
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     tcgccgccagcgccgcgccg 438
               ||||||||||||||||||||
Sbjct: 3230880 tcgccgccagcgccgcgccg 3230899
to top
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 411   gtggtagatcgccgccagcgccgcgccgatgaacgg 446
             |||||| | |||||| | ||||||||||||||||||
Sbjct: 13494 gtggtacagcgccgcgatcgccgcgccgatgaacgg 13459
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 423     cgccagcgccgcgccgatga 442
               ||||||||||||||||||||
Sbjct: 1521793 cgccagcgccgcgccgatga 1521774
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cgccgccagcgccgcgccga 439
               ||||||||||||||||||||
Sbjct: 5795700 cgccgccagcgccgcgccga 5795719
to top
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0475E07
          Length = 139961

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 411   gtggtagatcgccgccagcgccgcgccgatgaacgg 446
             |||||| | |||||| | ||||||||||||||||||
Sbjct: 92508 gtggtacagcgccgcgatcgccgcgccgatgaacgg 92473
to top
>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence
          Length = 169897

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ttcttaataataatttacat 78
             ||||||||||||||||||||
Sbjct: 69809 ttcttaataataatttacat 69790
to top
>dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G03, full
           insert sequence
          Length = 853

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 gccgcggctcttgaagggga 391
           ||||||||||||||||||||
Sbjct: 97  gccgcggctcttgaagggga 116
to top
>dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F12, full
           insert sequence
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 gccgcggctcttgaagggga 391
           ||||||||||||||||||||
Sbjct: 538 gccgcggctcttgaagggga 519
to top
>dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132K03, full
           insert sequence
          Length = 1215

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 411 gtggtagatcgccgccagcgccgcgccgatgaacgg 446
           |||||| | |||||| | ||||||||||||||||||
Sbjct: 898 gtggtacagcgccgcgatcgccgcgccgatgaacgg 863
to top
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    taataataatttacatacat 82
             ||||||||||||||||||||
Sbjct: 76094 taataataatttacatacat 76075
to top
>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the complete
              sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     tacatacatatgcacgctgg 93
              ||||||||||||||||||||
Sbjct: 123669 tacatacatatgcacgctgg 123650
to top
>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
             sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    taataataatttacatacat 82
             ||||||||||||||||||||
Sbjct: 23638 taataataatttacatacat 23619
to top
>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete
              sequence
          Length = 203615

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    tgcgtggtactggtacaatg 124
              ||||||||||||||||||||
Sbjct: 196039 tgcgtggtactggtacaatg 196058
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 181     gaacaggcgacgctgccggc 200
               ||||||||||||||||||||
Sbjct: 1380459 gaacaggcgacgctgccggc 1380478
to top
>emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chromosome X, complete
             sequence
          Length = 98612

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tgcgtggtactggtacaatg 124
             ||||||||||||||||||||
Sbjct: 32191 tgcgtggtactggtacaatg 32172
to top
>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence
          Length = 174162

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tgcgtggtactggtacaatg 124
             ||||||||||||||||||||
Sbjct: 50679 tgcgtggtactggtacaatg 50660
to top
>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence
          Length = 222889

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   acaatgcaaaaggtagggaa 138
             ||||||||||||||||||||
Sbjct: 94243 acaatgcaaaaggtagggaa 94262


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,447,972
Number of Sequences: 3902068
Number of extensions: 3447972
Number of successful extensions: 76574
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75034
Number of HSP's gapped (non-prelim): 1538
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top