>MIA40_HUMAN (Q8N4Q1) Mitochondrial intermembrane space import and assembly|
           protein 40 (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4)
          Length = 142

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF  STE  KGSDCV  F A+Q C+++ P
Sbjct: 68  FKSAFSCFHYSTEEIKGSDCVDQFRAMQECMQKYP 102

>MIA40_NEUCR (Q7S3S2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 298

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F  AFSCF+ STE  KG DC++ F  +Q+C ++ P  +
Sbjct: 206 FKAAFSCFVYSTEEPKGMDCIEKFSHMQDCFRKYPEVY 243

>MIA40_BRARE (Q6DEI8) Mitochondrial intermembrane space import and assembly|
           protein 40 (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4)
          Length = 146

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F DAFSCF  S E  KGSDCV+ F  +Q C+++ P  +
Sbjct: 68  FKDAFSCFHYSKEEIKGSDCVENFRGMQECMQKYPELY 105

>MIA40_RAT (Q5BJN5) Mitochondrial intermembrane space import and assembly|
           protein 40 (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4)
          Length = 139

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF  STE  KGSDC+  F A+Q C+++ P
Sbjct: 68  FKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYP 102

>MIA40_MOUSE (Q8VEA4) Mitochondrial intermembrane space import and assembly|
           protein 40 (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4)
          Length = 139

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF  STE  KGSDC+  F A+Q C+++ P
Sbjct: 68  FKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYP 102

>MIA40_ASPFU (Q4WGL2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 297

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F  AFSCF+ STE  KG DC+  F  +Q C +  P  +
Sbjct: 167 FKAAFSCFVYSTEEPKGMDCIDKFKGMQECFRRYPDVY 204

>MIA40_EMENI (P0C1D2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 283

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F  AFSCF+ S E  KG DC+  F A+Q+C + +P  +
Sbjct: 167 FRAAFSCFVYSEEEPKGMDCIDKFKAMQDCFRAHPDVY 204

>MIA40_USTMA (Q4P8D2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 247

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -3

Query: 382 AFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           AFSCF+ S    KG DCV  F A+Q+C +E+P  +
Sbjct: 167 AFSCFVYSEAEPKGIDCVDKFKAMQDCFREHPDVY 201

>MI40B_XENLA (Q63ZK1) Mitochondrial intermembrane space import and assembly|
           protein 40-B (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4-B)
          Length = 139

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F  AFSCF  S E  KGSDC+  F A+Q C+++ P  +
Sbjct: 68  FKSAFSCFHYSQEEIKGSDCLDQFRAMQECMQKYPELY 105

>MIA40_BOVIN (Q2KHZ4) Mitochondrial intermembrane space import and assembly|
           protein 40 (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4)
          Length = 137

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF  S E  KGSDCV  F A+Q C+++ P
Sbjct: 68  FKAAFSCFHYSKEDVKGSDCVDQFRAMQECMQKYP 102

>MIA40_DEBHA (Q6BSK8) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 249

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F +AF+CF+ S    KG +C++ F +++NC +E+P
Sbjct: 161 FKEAFACFIYSESEPKGIECIKKFESMRNCFREHP 195

>MIA40_XENTR (Q6PBC3) Mitochondrial intermembrane space import and assembly|
           protein 40 (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4)
          Length = 139

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF  S E  KGSDC+  F A+Q C+++ P
Sbjct: 68  FKSAFSCFHYSQEEIKGSDCLDQFRAMQECMQKYP 102

>MIA40_GIBZE (Q4IK03) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 391

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF+ S E  KG DC+  F  +Q C K+ P
Sbjct: 167 FKTAFSCFVFSQEEPKGMDCIDKFQGMQECFKKYP 201

>MIA40_CRYNE (Q5KGA4) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 242

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F  AFSCF+ S    KG DCV+ F  +Q+C +E+P  +
Sbjct: 159 FKAAFSCFVYSEAEPKGVDCVELFKVMQDCFREHPEIY 196

>MIA40_KLULA (Q6CSA1) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 406

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF+ S    KG +CV+ F  +QNC ++ P
Sbjct: 297 FKSAFSCFVYSEADPKGINCVEKFSTMQNCFRKYP 331

>MI40A_XENLA (Q6NU12) Mitochondrial intermembrane space import and assembly|
           protein 40-A (Coiled-coil-helix-coiled-coil-helix
           domain-containing protein 4-A)
          Length = 139

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF  S E  KGSDC+  F  +Q C+++ P
Sbjct: 68  FKSAFSCFHYSQEEIKGSDCLDQFRGMQECMQKYP 102

>MIA40_ASHGO (Q757A5) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 266

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AF+CF+ S    KG DCV+ F  +Q+C +++P
Sbjct: 202 FKAAFACFVYSEAEPKGIDCVEKFQVMQDCFRQHP 236

>MIA40_YEAST (P36046) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 403

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF+ S    KG DCV+ F  +Q+C ++ P
Sbjct: 311 FKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYP 345

>MIA40_SCHPO (P87059) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 313

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENPAAF 278
           F  AFSCF+ S    KG +C+  F A+Q C +++P  +
Sbjct: 214 FKAAFSCFVYSKSEPKGMECLDKFQAMQACFQKHPEIY 251

>MIA40_CANAL (O94030) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 252

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F +AFSCF+ S    KG DC++ F  +++C K  P
Sbjct: 167 FKEAFSCFVFSETEPKGIDCIKKFENMRSCFKRYP 201

>MIA40_CANGA (Q6FW26) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 404

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPFIALQNCIKENP 287
           F  AFSCF+ S    KG DCV+ F  +Q+C +  P
Sbjct: 306 FKAAFSCFVYSEAEPKGIDCVEKFQHMQDCFRRYP 340

>MIA40_ASPOR (Q2USJ2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 187

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 391 FVDAFSCFLRSTEVEKGSDCVQPF 320
           F  AFSCF+ S E  KG DC++ F
Sbjct: 161 FKAAFSCFVYSEEEPKGMDCIEKF 184

>EGFR_MOUSE (Q01279) Epidermal growth factor receptor precursor (EC 2.7.10.1)|
          Length = 1210

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = +1

Query: 7   VWKY--------FCHANCAYAC 48
           VWKY         CHANC Y C
Sbjct: 607 VWKYADANNVCHLCHANCTYGC 628

>SYA_LACJO (P61702) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 882

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 118 ESGQSLYQAVSLIPQDLKALVWI 186
           E G  + Q+ SLIPQD   L+WI
Sbjct: 19  EHGHMVMQSASLIPQDDPTLLWI 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,312,146
Number of Sequences: 219361
Number of extensions: 705755
Number of successful extensions: 1525
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)