ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart22a10 |
|---|---|
| Clone Library Name | barley_pub |
>TRPF_CAMJE (Q9PIF3) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 199 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +1 Query: 4 RNILGLLHFKRSQIVVQTIDQTKHQIIYCITRA-LDLMHTARTHISSDHQLISLQ 165 RN+ + H K ++V +D+ QI+ CI A LD + RT + +++ +Q Sbjct: 43 RNLSAIFHEKDKKVVGVFVDENLEQILRCIKEAKLDGIQIYRTITKEEFEILKVQ 97
>ETOL1_ARATH (Q9ZQX6) ETO1-like protein 1 (Ethylene overproducer 1-like protein| 1) Length = 888 Score = 30.0 bits (66), Expect = 1.6 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 Query: 16 GLLHFKRSQIVVQTIDQTKHQIIYCITRALDLMHTARTHISSDHQLISLQPPGWIL 183 G+L+F++S ++++ + C A+ + AR H SSDH+ + + GWIL Sbjct: 603 GVLYFRQSLLLLR---------LNCPEAAMRSLQLAREHASSDHERLVYE--GWIL 647
>PER23_ARATH (O80912) Peroxidase 23 precursor (EC 1.11.1.7) (Atperox P23)| (ATP34) Length = 349 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = -2 Query: 283 QGEIRRNCRVINP 245 QGEIR+NCRV+NP Sbjct: 322 QGEIRQNCRVVNP 334
>PER22_ARATH (P24102) Peroxidase 22 precursor (EC 1.11.1.7) (Atperox P22)| (ATPEa) (Basic peroxidase E) Length = 349 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = -2 Query: 283 QGEIRRNCRVINP 245 QGEIR+NCRV+NP Sbjct: 322 QGEIRQNCRVVNP 334
>WETA_EMENI (P22022) Regulatory protein wetA| Length = 555 Score = 28.1 bits (61), Expect = 6.0 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKL 156 R SFSPG++R ++Q G C++ Sbjct: 160 RKQSFSPGLMRSSQLQKGSCRM 181
>ATP4A_RABIT (P27112) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1034 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKLISWWSLEICVRAVCMRSS 102 R P +P ++F R GG + + W + IC+ A +++S Sbjct: 91 RPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 130
>ATP4A_HUMAN (P20648) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1034 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKLISWWSLEICVRAVCMRSS 102 R P +P ++F R GG + + W + IC+ A +++S Sbjct: 91 RPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 130
>SO5A1_HUMAN (Q9H2Y9) Solute carrier organic anion transporter family member 5A1| (Solute carrier family 21 member 15) (Organic anion transporter polypeptide-related protein 4) (OATP-RP4) (OATPRP4) Length = 848 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Frame = -3 Query: 129 CTCSVHEVE--CSSDAINYLMFCL 64 C C +HE E C SD I Y CL Sbjct: 559 CGCKIHEYEPVCGSDGITYFNPCL 582
>ATP4A_RAT (P09626) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1032 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKLISWWSLEICVRAVCMRSS 102 R P +P ++F R GG + + W + IC+ A +++S Sbjct: 89 RPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 128
>ATP4A_MOUSE (Q64436) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1032 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKLISWWSLEICVRAVCMRSS 102 R P +P ++F R GG + + W + IC+ A +++S Sbjct: 89 RPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 128
>MAAZ4_SCHCO (P37938) Mating-type protein A-alpha Z4| Length = 940 Score = 27.7 bits (60), Expect = 7.9 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Frame = -3 Query: 282 RARSGATAGSSTLPTPLVPAPFTIIFSRDHQVLQDPTRWLQAD*LVVT---RDMCTCSVH 112 R+RS + S + +P P + S +V DPT W+ D T RD+ + Sbjct: 583 RSRSSPSVSSPPSVSVSLPLPSRGVPSGGIKVTGDPTPWVNWDLEAHTQAPRDLTAATKS 642 Query: 111 EVECSSDAI 85 CS DA+ Sbjct: 643 SAGCSVDAV 651
>ATP4A_PIG (P19156) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKLISWWSLEICVRAVCMRSS 102 R P +P ++F R GG + + W + IC+ A +++S Sbjct: 90 RPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 129
>ATP4A_CANFA (P50996) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -1 Query: 221 RSPSFSPGIIRFFRIQPGGCKLISWWSLEICVRAVCMRSS 102 R P +P ++F R GG + + W + IC+ A +++S Sbjct: 90 RPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,546,513 Number of Sequences: 219361 Number of extensions: 768501 Number of successful extensions: 1912 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1912 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
