Clone Name | rbart22a10 |
---|---|
Clone Library Name | barley_pub |
>gb|AY107230.1| Zea mays PCO080642 mRNA sequence Length = 906 Score = 77.8 bits (39), Expect = 2e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||||||||||||||||||||||||||||||||||||| Sbjct: 601 agggttgatgaccctgcagttgcgcctgatctcgccctg 563
>gb|AY508516.1| Zea mays disrupted peroxidase (pox3) gene, partial sequence; and transposon MITE, complete sequence Length = 1744 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gggttgatgaccctgcagttgcgcctgatctcgccctg 1513
>gb|AY508163.1| Zea mays cultivar F324 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gggttgatgaccctgcagttgcgcctgatctcgccctg 1513
>gb|AY508162.1| Zea mays cultivar F227 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gggttgatgaccctgcagttgcgcctgatctcgccctg 1513
>gb|AY508161.1| Zea mays cultivar F226 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gggttgatgaccctgcagttgcgcctgatctcgccctg 1513
>gb|AY508160.1| Zea mays cultivar F7012 disrupted peroxidase (pox3) gene, exons 1 through 3; and transposon MITE, complete sequence Length = 1744 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gggttgatgaccctgcagttgcgcctgatctcgccctg 1513
>gb|AY508159.1| Zea mays cultivar Quebec28 disrupted peroxidase (pox3) gene, pox3-2 allele, exons 1 through 3; and transposon MITE, complete sequence Length = 1752 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1553 gggttgatgaccctgcagttgcgcctgatctcgccctg 1516
>gb|AY500812.1| Zea mays cultivar F271 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500811.1| Zea mays cultivar F66 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500810.1| Zea mays cultivar 212 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500809.1| Zea mays cultivar F120 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500808.1| Zea mays cultivar W117 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500807.1| Zea mays cultivar Mo17 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1428 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1234 gggttgatgaccctgcagttgcgcctgatctcgccctg 1197
>gb|AY500806.1| Zea mays cultivar Lan496 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1436 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1242 gggttgatgaccctgcagttgcgcctgatctcgccctg 1205
>gb|AY500805.1| Zea mays cultivar MBS847 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500804.1| Zea mays cultivar F7025 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500803.1| Zea mays cultivar F4 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1427 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1233 gggttgatgaccctgcagttgcgcctgatctcgccctg 1196
>gb|AY500802.1| Zea mays cultivar F288 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1426 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gggttgatgaccctgcagttgcgcctgatctcgccctg 1195
>gb|AY500801.1| Zea mays cultivar F2 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1413 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gggttgatgaccctgcagttgcgcctgatctcgccctg 1184
>gb|AY500800.1| Zea mays cultivar B73 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500799.1| Zea mays cultivar F1 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gggttgatgaccctgcagttgcgcctgatctcgccctg 1195
>gb|AY500798.1| Zea mays cultivar 16 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500797.1| Zea mays cultivar EP1 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gggttgatgaccctgcagttgcgcctgatctcgccctg 1184
>gb|AY500796.1| Zea mays cultivar F286 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500795.1| Zea mays cultivar Du101 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1436 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1244 gggttgatgaccctgcagttgcgcctgatctcgccctg 1207
>gb|AY500794.1| Zea mays cultivar F64 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500793.1| Zea mays cultivar F113 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1230 gggttgatgaccctgcagttgcgcctgatctcgccctg 1193
>gb|AY500792.1| Zea mays cultivar F564 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gggttgatgaccctgcagttgcgcctgatctcgccctg 1184
>gb|AY500791.1| Zea mays cultivar B14 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gggttgatgaccctgcagttgcgcctgatctcgccctg 1195
>gb|AY500790.1| Zea mays cultivar Wis93-3520 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gggttgatgaccctgcagttgcgcctgatctcgccctg 1184
>gb|AY500789.1| Zea mays cultivar W64A peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1414 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500788.1| Zea mays cultivar Wis94-443 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1415 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gggttgatgaccctgcagttgcgcctgatctcgccctg 1184
>gb|AY500787.1| Zea mays cultivar DE811 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1422 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gggttgatgaccctgcagttgcgcctgatctcgccctg 1194
>gb|AY500786.1| Zea mays cultivar RotalerSilomais peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gggttgatgaccctgcagttgcgcctgatctcgccctg 1195
>gb|AY500785.1| Zea mays cultivar NoordlanderVC145 peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1436 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1242 gggttgatgaccctgcagttgcgcctgatctcgccctg 1205
>gb|AY500784.1| Zea mays cultivar RainbowFlint peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1416 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gggttgatgaccctgcagttgcgcctgatctcgccctg 1185
>gb|AY500783.1| Zea mays cultivar PolarDent peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1424 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gggttgatgaccctgcagttgcgcctgatctcgccctg 1195
>gb|AY500782.1| Zea mays cultivar Sibiriacka peroxidase (pox3) gene, exons 1 through 3 and partial cds Length = 1413 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gggttgatgaccctgcagttgcgcctgatctcgccctg 1184
>gb|AY500781.1| Zea mays cultivar Quebec28 peroxidase (pox3) gene, pox3-1 allele, exons 1 through 3 and partial cds Length = 1426 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1232 gggttgatgaccctgcagttgcgcctgatctcgccctg 1195
>emb|AJ401276.1|ZMA401276 Zea mays partial mRNA for peroxidase (pox3 gene) Length = 1294 Score = 75.8 bits (38), Expect = 7e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 246 gggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||||||||||||||||||||||||||||||||| Sbjct: 1008 gggttgatgaccctgcagttgcgcctgatctcgccctg 971
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 151517 agggttgacgaccctgcagttgagcctgatctcgccctg 151555
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 8233 agggttgacgaccctgcagttgagcctgatctcgccctg 8271
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 3585886 agggttgacgaccctgcagttgagcctgatctcgccctg 3585924
>dbj|AK102154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E17, full insert sequence Length = 1344 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 1038 agggttgacgaccctgcagttgagcctgatctcgccctg 1000
>dbj|AK067416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102I07, full insert sequence Length = 1358 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 1037 agggttgacgaccctgcagttgagcctgatctcgccctg 999
>tpe|BN000601.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx72 gene for class III peroxidase 72 precursor, exons 1-3 Length = 1816 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 245 agggttgatgaccctgcagttgcgcctgatctcgccctg 283 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 1732 agggttgacgaccctgcagttgagcctgatctcgccctg 1694
>ref|NM_183819.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 978 gttgacgaccctgcagttgagcctgacctcgccctg 943
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 12564805 gttgacgaccctgcagttgagcctgacctcgccctg 12564770
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 76415 gttgacgaccctgcagttgagcctgacctcgccctg 76380
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 150420 gttgacgaccctgcagttgagcctgacctcgccctg 150385
>dbj|AK099241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O19, full insert sequence Length = 1350 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 1020 gttgacgaccctgcagttgagcctgacctcgccctg 985
>dbj|AK068063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129I12, full insert sequence Length = 1348 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 1018 gttgacgaccctgcagttgagcctgacctcgccctg 983
>tpe|BN000545.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx16 gene for class III peroxidase 16 precursor, exons 1-2 Length = 3775 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatctcgccctg 283 ||||| ||||||||||||| |||||| ||||||||| Sbjct: 3697 gttgacgaccctgcagttgagcctgacctcgccctg 3662
>gb|AC121762.7| Homo sapiens 12 BAC RP11-195D6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82558 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 gatcctgaagaacctgatgatc 198 |||||||||||||||||||||| Sbjct: 56048 gatcctgaagaacctgatgatc 56027
>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 139793 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 gatcctgaagaacctgatgatc 198 |||||||||||||||||||||| Sbjct: 22288 gatcctgaagaacctgatgatc 22309
>gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, complete cds Length = 1308 Score = 42.1 bits (21), Expect = 0.94 Identities = 27/29 (93%) Strand = Plus / Minus Query: 248 gttgatgaccctgcagttgcgcctgatct 276 ||||| |||||||||||||||||| |||| Sbjct: 1026 gttgacgaccctgcagttgcgcctaatct 998
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 tcctgaagaacctgatgatcccggg 203 |||||||||||||||||||| |||| Sbjct: 516126 tcctgaagaacctgatgatcgcggg 516150
>emb|AL162499.20| Human DNA sequence from clone RP11-315H15 on chromosome 13 Contains part of a novel gene and a CpG island, complete sequence Length = 140907 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 acctggttggatcctgaagaa 188 ||||||||||||||||||||| Sbjct: 8300 acctggttggatcctgaagaa 8320
>emb|AL139088.11| Human DNA sequence from clone RP11-129M14 on chromosome 13q12.11-13.1 Contains a steroidogenic acute regulatory protein (STAR) pseudogene, complete sequence Length = 48726 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aaaacatcagataatttattgcatc 93 ||||||||||||||| ||||||||| Sbjct: 20869 aaaacatcagataatctattgcatc 20893
>emb|BX649107.1|HSM809259 Homo sapiens mRNA; cDNA DKFZp686G0629 (from clone DKFZp686G0629) Length = 6917 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 acctggttggatcctgaagaa 188 ||||||||||||||||||||| Sbjct: 1916 acctggttggatcctgaagaa 1896
>gb|AC011093.6|AC011093 Homo sapiens, clone RP11-1L24, complete sequence Length = 161151 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aaaacatcagataatttattgcatc 93 ||||||||||||||| ||||||||| Sbjct: 18875 aaaacatcagataatctattgcatc 18899
>gb|AC005569.1| Homo sapiens chromosome 16, cosmid clone 317H7 (LANL), complete sequence Length = 34719 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaacatcagataatttattg 89 |||||||||||||||||||| Sbjct: 12869 aaacatcagataatttattg 12850
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 12591370 gcagttgagcctgatctcgccctg 12591347
>emb|AL009193.1|DMC103B4 Drosophila melanogaster cosmid clone 103B4 Length = 26697 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aagaacctgatgatcccggg 203 |||||||||||||||||||| Sbjct: 5833 aagaacctgatgatcccggg 5814
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 85619 gcagttgagcctgatctcgccctg 85642
>gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete sequence Length = 106571 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 agataatttattgcatcact 96 |||||||||||||||||||| Sbjct: 13476 agataatttattgcatcact 13495
>gb|AY118991.1| Drosophila melanogaster LP02712 full insert cDNA Length = 1648 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aagaacctgatgatcccggg 203 |||||||||||||||||||| Sbjct: 1036 aagaacctgatgatcccggg 1055
>ref|NM_143764.1| Drosophila melanogaster CG18031-RA (CG18031), mRNA Length = 1620 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aagaacctgatgatcccggg 203 |||||||||||||||||||| Sbjct: 1036 aagaacctgatgatcccggg 1055
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aagaacctgatgatcccggg 203 |||||||||||||||||||| Sbjct: 176482 aagaacctgatgatcccggg 176463
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193714 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aagaacctgatgatcccggg 203 |||||||||||||||||||| Sbjct: 35420 aagaacctgatgatcccggg 35401
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aacatcagataatttattgcatca 94 |||||| ||||||||||||||||| Sbjct: 18201329 aacatcggataatttattgcatca 18201306
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 12588133 gcagttgagcctgatctcgccctg 12588110
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0477A12 Length = 138141 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aacatcagataatttattgcatca 94 |||||| ||||||||||||||||| Sbjct: 136635 aacatcggataatttattgcatca 136612
>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1218_C12 Length = 105861 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aacatcagataatttattgcatca 94 |||||| ||||||||||||||||| Sbjct: 4572 aacatcggataatttattgcatca 4549
>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full insert sequence Length = 1265 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full insert sequence Length = 1215 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1039 gcagttgagcctgatctcgccctg 1016
>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full insert sequence Length = 1264 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1036 gcagttgagcctgatctcgccctg 1013
>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full insert sequence Length = 1263 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 1035 gcagttgagcctgatctcgccctg 1012
>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full insert sequence Length = 1031 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 803 gcagttgagcctgatctcgccctg 780
>dbj|AK058214.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D11, full insert sequence Length = 710 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aacatcagataatttattgcatca 94 |||||| ||||||||||||||||| Sbjct: 168 aacatcggataatttattgcatca 191
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 cctgcagttgcgcctgatctcgcc 280 |||||||||| ||||||||||||| Sbjct: 1093 cctgcagttgtgcctgatctcgcc 1070
>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for class III peroxidase 41 precursor, exons 1-4 Length = 5018 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 gcagttgcgcctgatctcgccctg 283 ||||||| |||||||||||||||| Sbjct: 5003 gcagttgagcctgatctcgccctg 4980
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aagaacctgatgatcccggg 203 |||||||||||||||||||| Sbjct: 136161 aagaacctgatgatcccggg 136142
>emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25, complete sequence Length = 253422 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaacatcagataatttattg 89 |||||||||||||||||||| Sbjct: 65253 aaacatcagataatttattg 65272
>emb|AL671913.10| Mouse DNA sequence from clone RP23-136P3 on chromosome 4, complete sequence Length = 220940 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gggagaaaatgatggtgaac 220 |||||||||||||||||||| Sbjct: 38523 gggagaaaatgatggtgaac 38542 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,215,873 Number of Sequences: 3902068 Number of extensions: 2215873 Number of successful extensions: 37099 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36916 Number of HSP's gapped (non-prelim): 183 length of query: 284 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 262 effective length of database: 17,147,199,772 effective search space: 4492566340264 effective search space used: 4492566340264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)