Clone Name | rbart21h06 |
---|---|
Clone Library Name | barley_pub |
>P3C2B_HUMAN (O00750) Phosphatidylinositol-4-phosphate 3-kinase C2| domain-containing beta polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-beta) (PtdIns-3-kinase C2 beta) (PI3K-C2beta) (C2-PI3K) Length = 1634 Score = 30.8 bits (68), Expect = 1.3 Identities = 24/99 (24%), Positives = 45/99 (45%) Frame = +2 Query: 110 ALLDSIQLFCNISSLKLSAVSVKPAARRASNSLLQAETSNSGTFDRCHWSTTSAASFSCP 289 A+LD ++L+CN + + P +R+ + L+Q + CH++ + A + Sbjct: 592 AILDLVELYCNTFNADFQ--TAVPGSRK--HDLVQ---------EACHFARSLAFTVYAT 638 Query: 290 HIR*AESTQT*FRLVILWAVICIDFHMSFTLSRLPRPAC 406 H R+ I+WA DF++S +LS + C Sbjct: 639 H-----------RIPIIWATSYEDFYLSCSLSHGGKELC 666
>RISB2_CAUCR (Q9A8J4) 6,7-dimethyl-8-ribityllumazine synthase 2 (EC 2.5.1.9)| (DMRL synthase 2) (Lumazine synthase 2) (Riboflavin synthase 2 beta chain) Length = 154 Score = 29.3 bits (64), Expect = 3.7 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = -1 Query: 310 ALCLSDVRATEGCRGGRRPVAAIESPGVRRLRLQQA 203 A LS R +EG RGG A +E+ G++R L QA Sbjct: 118 AQALSRARVSEGDRGGAAAKACLETIGLKRQLLGQA 153
>IRBP_MOUSE (P49194) Interphotoreceptor retinoid-binding protein precursor (IRBP)| (Interstitial retinol-binding protein) Length = 1234 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/50 (24%), Positives = 27/50 (54%) Frame = -2 Query: 384 DRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKV 235 D V ++W Q+T +R S+ V +L++ + G ++ ++ + R+ V Sbjct: 1115 DSVSELWTHTQLTGERYGSKKSVAILTSGVTAGAAEEFTYIMKRLGRALV 1164
>GALU_SHIFL (P0AEP6) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) Length = 301 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Frame = +1 Query: 133 LLQHQLSKAIRRVGETGGQKSIEQPVAG---------GDVELRDFRSLPLVDDLRGILQL 285 L Q L++ IRR ETG + + +PVA VEL S+P+V G+++ Sbjct: 146 LSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMV----GVVEK 201 Query: 286 PAHQIGREHADVVPTSHPLGG 348 P ADV P++ + G Sbjct: 202 P-------KADVAPSNLAIVG 215
>GALU_ECOLI (P0AEP3) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) Length = 301 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Frame = +1 Query: 133 LLQHQLSKAIRRVGETGGQKSIEQPVAG---------GDVELRDFRSLPLVDDLRGILQL 285 L Q L++ IRR ETG + + +PVA VEL S+P+V G+++ Sbjct: 146 LSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMV----GVVEK 201 Query: 286 PAHQIGREHADVVPTSHPLGG 348 P ADV P++ + G Sbjct: 202 P-------KADVAPSNLAIVG 215
>GALU_ECOL6 (P0AEP4) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) Length = 301 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Frame = +1 Query: 133 LLQHQLSKAIRRVGETGGQKSIEQPVAG---------GDVELRDFRSLPLVDDLRGILQL 285 L Q L++ IRR ETG + + +PVA VEL S+P+V G+++ Sbjct: 146 LSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMV----GVVEK 201 Query: 286 PAHQIGREHADVVPTSHPLGG 348 P ADV P++ + G Sbjct: 202 P-------KADVAPSNLAIVG 215
>GALU_ECO57 (P0AEP5) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) Length = 301 Score = 28.1 bits (61), Expect = 8.3 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Frame = +1 Query: 133 LLQHQLSKAIRRVGETGGQKSIEQPVAG---------GDVELRDFRSLPLVDDLRGILQL 285 L Q L++ IRR ETG + + +PVA VEL S+P+V G+++ Sbjct: 146 LSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMV----GVVEK 201 Query: 286 PAHQIGREHADVVPTSHPLGG 348 P ADV P++ + G Sbjct: 202 P-------KADVAPSNLAIVG 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,559,187 Number of Sequences: 219361 Number of extensions: 1080867 Number of successful extensions: 3091 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3048 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3090 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)