ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phos... 220 3e-54
2emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putati... 220 3e-54
3gb|AY106317.1| Zea mays PCO101473 mRNA sequence 192 7e-46
4gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
7dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
8dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
9dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
10ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
11dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
12dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
13dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
14dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
15dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
16dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
17dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
18dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
19gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
20gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
21gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
22gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
23dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
24dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
25dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
26dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
27dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
28dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
29dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
30dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
31dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
32ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
34dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
35dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
36dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
37dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
38dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
39dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
40dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
41dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
42ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.6
43gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complet... 42 1.6
44gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, comp... 40 6.3
45ref|NM_193052.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
46ref|NM_193043.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
47gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, com... 40 6.3
48ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple my... 40 6.3
49gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete se... 40 6.3
50gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
51gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete s... 40 6.3
52gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, com... 40 6.3
53gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cance... 40 6.3
54gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
55dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.3
56emb|BX950605.2| Gallus gallus finished cDNA, clone ChEST529k5 40 6.3
57dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
59emb|BX934717.1| Gallus gallus finished cDNA, clone ChEST114j14 40 6.3
60gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds 40 6.3
61ref|XM_231590.3| PREDICTED: Rattus norvegicus plexin A4 (predict... 40 6.3
62gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
63dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
64dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
65emb|CR545466.9| Zebrafish DNA sequence from clone DKEYP-115A10 i... 40 6.3
66dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
67gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, comple... 40 6.3
68gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
69emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3

>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase
          Length = 2748

 Score =  220 bits (111), Expect = 3e-54
 Identities = 210/243 (86%)
 Strand = Plus / Minus

                                                                        
Query: 216  cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
            ||||| ||||||||||||||||||| ||| |  |||||||||| || ||||| |||||||
Sbjct: 2618 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 2559

                                                                        
Query: 276  cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
            ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||
Sbjct: 2558 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 2499

                                                                        
Query: 336  gcttctgcctctcgccggacttgtaggtcatcgcagagcccttgaacccgggttgcttca 395
            |||||| ||||||| ||||||||||||  || || ||||||||||||||  ||||||| |
Sbjct: 2498 gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 2439

                                                                        
Query: 396  gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 455
            ||   ||| |||||||||| ||||  ||||||| |||||||||   |||||||| |||||
Sbjct: 2438 gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 2379

               
Query: 456  tct 458
            |||
Sbjct: 2378 tct 2376



to top

>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3
            gene)
          Length = 1152

 Score =  220 bits (111), Expect = 3e-54
 Identities = 210/243 (86%)
 Strand = Plus / Minus

                                                                        
Query: 216  cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
            ||||| ||||||||||||||||||| ||| |  |||||||||| || ||||| |||||||
Sbjct: 1022 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 963

                                                                        
Query: 276  cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
            ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||
Sbjct: 962  cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 903

                                                                        
Query: 336  gcttctgcctctcgccggacttgtaggtcatcgcagagcccttgaacccgggttgcttca 395
            |||||| ||||||| ||||||||||||  || || ||||||||||||||  ||||||| |
Sbjct: 902  gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 843

                                                                        
Query: 396  gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 455
            ||   ||| |||||||||| ||||  ||||||| |||||||||   |||||||| |||||
Sbjct: 842  gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 783

               
Query: 456  tct 458
            |||
Sbjct: 782  tct 780



to top

>gb|AY106317.1| Zea mays PCO101473 mRNA sequence
          Length = 827

 Score =  192 bits (97), Expect = 7e-46
 Identities = 133/145 (91%)
 Strand = Plus / Minus

                                                                       
Query: 218 tagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccg 277
           ||||| |||||||| | |||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 541 tagccaatgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccg 482

                                                                       
Query: 278 aggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagc 337
           ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 481 aggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagc 422

                                    
Query: 338 ttctgcctctcgccggacttgtagg 362
           ||||| | |||||||||||||||||
Sbjct: 421 ttctggcgctcgccggacttgtagg 397



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                        
Query: 421 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 294



to top

>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01,
             complete sequence
          Length = 135184

 Score =  165 bits (83), Expect = 2e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                         
Query: 216   cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
             |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 89814 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 89873

                                                                         
Query: 276   cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
             |||||||||||||||||||||| ||||||||||||||||||    | ||||| |||| ||
Sbjct: 89874 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 89933

                                    
Query: 336   gcttctgcctctcgccggacttg 358
             ||||||||| |||||||||||||
Sbjct: 89934 gcttctgccgctcgccggacttg 89956



 Score =  161 bits (81), Expect = 3e-36
 Identities = 123/137 (89%)
 Strand = Plus / Plus

                                                                         
Query: 224   atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 283
             |||||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279

                                                                         
Query: 284   tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 343
             || ||||||||||| |||||||| ||||||||||   | || ||||||||||||||||||
Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339

                              
Query: 344   ctctcgccggacttgta 360
             | |||||||||||||||
Sbjct: 80340 cgctcgccggacttgta 80356



 Score =  157 bits (79), Expect = 4e-35
 Identities = 127/143 (88%)
 Strand = Plus / Plus

                                                                         
Query: 216   cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
             |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 90313 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 90372

                                                                         
Query: 276   cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
             |||||||||||||||||||||| |||||||||||||| |||    | ||||| |||| ||
Sbjct: 90373 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 90432

                                    
Query: 336   gcttctgcctctcgccggacttg 358
             ||||||||| |||||||||||||
Sbjct: 90433 gcttctgccgctcgccggacttg 90455



 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                          
Query: 216    cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
              ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |  |
Sbjct: 104198 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 104257

                                                                          
Query: 276    cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
              |||||||||| ||||| ||||| || |||||||||| ||||    | ||||| |||| ||
Sbjct: 104258 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 104317

                                       
Query: 336    gcttctgcctctcgccggacttgta 360
              |||| |||| |||||||||||||||
Sbjct: 104318 gcttttgccgctcgccggacttgta 104342



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                  
Query: 275  ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
            |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 422    ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
              ||||| ||||||||||| ||||||||||||  ||| ||||||||
Sbjct: 104419 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 104462



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 390   gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 449
             |||| ||||| || ||||||||||| |||   ||||| ||||| ||||| ||||||||||
Sbjct: 90502 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 90561

               
Query: 450   tg 451
             ||
Sbjct: 90562 tg 90563



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 409   ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 462
             |||||| ||||  ||||| ||| ||||||| ||||||||||||| ||| |||||
Sbjct: 80420 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 80473



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 2e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                           
Query: 216     cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
               |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 5556605 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5556664

                                                                           
Query: 276     cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
               |||||||||||||||||||||| ||||||||||||||||||    | ||||| |||| ||
Sbjct: 5556665 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 5556724

                                      
Query: 336     gcttctgcctctcgccggacttg 358
               ||||||||| |||||||||||||
Sbjct: 5556725 gcttctgccgctcgccggacttg 5556747



 Score =  161 bits (81), Expect = 3e-36
 Identities = 123/137 (89%)
 Strand = Plus / Plus

                                                                           
Query: 224     atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 283
               |||||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070

                                                                           
Query: 284     tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 343
               || ||||||||||| |||||||| ||||||||||   | || ||||||||||||||||||
Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130

                                
Query: 344     ctctcgccggacttgta 360
               | |||||||||||||||
Sbjct: 5547131 cgctcgccggacttgta 5547147



 Score =  157 bits (79), Expect = 4e-35
 Identities = 127/143 (88%)
 Strand = Plus / Plus

                                                                           
Query: 216     cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
               |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 5557104 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5557163

                                                                           
Query: 276     cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
               |||||||||||||||||||||| |||||||||||||| |||    | ||||| |||| ||
Sbjct: 5557164 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 5557223

                                      
Query: 336     gcttctgcctctcgccggacttg 358
               ||||||||| |||||||||||||
Sbjct: 5557224 gcttctgccgctcgccggacttg 5557246



 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                           
Query: 216     cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
               ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |  |
Sbjct: 5570989 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 5571048

                                                                           
Query: 276     cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
               |||||||||| ||||| ||||| || |||||||||| ||||    | ||||| |||| ||
Sbjct: 5571049 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 5571108

                                        
Query: 336     gcttctgcctctcgccggacttgta 360
               |||| |||| |||||||||||||||
Sbjct: 5571109 gcttttgccgctcgccggacttgta 5571133



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                           
Query: 245     agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 304
               ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| ||||||
Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454

                                
Query: 305     ttaccgacgatgacata 321
               |||||||| ||| ||||
Sbjct: 5399455 ttaccgacaatggcata 5399471



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                     
Query: 275     ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
               |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                           
Query: 227     tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
               ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 5416590 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 5416649

                                              
Query: 287     ctccactggtcgccgatgttaccgacgatga 317
                ||||||||||||| ||||| ||||||||||
Sbjct: 5416650 ttccactggtcgccaatgttgccgacgatga 5416680



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 277     gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327
               ||||||||||||||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 5452399



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 263     ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 306
               ||||||||| | |||||||||| |||||||||||| ||||||||
Sbjct: 5459713 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 5459756



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 422     ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
               ||||| ||||||||||| ||||||||||||  ||| ||||||||
Sbjct: 5571210 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 5571253



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 390     gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 449
               |||| ||||| || ||||||||||| |||   ||||| ||||| ||||| ||||||||||
Sbjct: 5557293 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 5557352

                 
Query: 450     tg 451
               ||
Sbjct: 5557353 tg 5557354



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                     
Query: 409     ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 462
               |||||| ||||  ||||| ||| ||||||| ||||||||||||| ||| |||||
Sbjct: 5547211 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 5547264



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 283     gtcgctccactggtcgccgatgttaccga 311
               ||||||||||||||| |||||||| ||||
Sbjct: 5428951 gtcgctccactggtcaccgatgttgccga 5428979



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                            
Query: 211      ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 270
                |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 16055858 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 16055799

                                                                            
Query: 271      cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 330
                 || || | |||||| ||||||||||| |||||||||||||||||||   | ||||||||
Sbjct: 16055798 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 16055739

                                              
Query: 331      ctgcagcttctgcctctcgccggacttgta 360
                |||||||||||| | |||||||||||||||
Sbjct: 16055738 ctgcagcttctgacgctcgccggacttgta 16055709



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 422      ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
                ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 16055632 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 16055589



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 338      ttctgcctctcgccggactt 357
                ||||||||||||||||||||
Sbjct: 25973349 ttctgcctctcgccggactt 25973330



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 338      ttctgcctctcgccggactt 357
                ||||||||||||||||||||
Sbjct: 25938072 ttctgcctctcgccggactt 25938091



to top

>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                         
Query: 211   ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 270
             |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 26191 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 26132

                                                                         
Query: 271   cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 330
              || || | |||||| ||||||||||| |||||||||||||||||||   | ||||||||
Sbjct: 26131 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 26072

                                           
Query: 331   ctgcagcttctgcctctcgccggacttgta 360
             |||||||||||| | |||||||||||||||
Sbjct: 26071 ctgcagcttctgacgctcgccggacttgta 26042



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 422   ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
             ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 25965 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 25922



to top

>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0040K22
          Length = 155832

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                          
Query: 211    ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 270
              |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 137260 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 137201

                                                                          
Query: 271    cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 330
               || || | |||||| ||||||||||| |||||||||||||||||||   | ||||||||
Sbjct: 137200 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 137141

                                            
Query: 331    ctgcagcttctgcctctcgccggacttgta 360
              |||||||||||| | |||||||||||||||
Sbjct: 137140 ctgcagcttctgacgctcgccggacttgta 137111



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 422    ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
              ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 137034 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 136991



to top

>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full
           insert sequence
          Length = 1076

 Score =  161 bits (81), Expect = 3e-36
 Identities = 123/137 (89%)
 Strand = Plus / Minus

                                                                       
Query: 224 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 283
           |||||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844

                                                                       
Query: 284 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 343
           || ||||||||||| |||||||| ||||||||||   | || ||||||||||||||||||
Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784

                            
Query: 344 ctctcgccggacttgta 360
           | |||||||||||||||
Sbjct: 783 cgctcgccggacttgta 767



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 409 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 462
           |||||| ||||  ||||| ||| ||||||| ||||||||||||| ||| |||||
Sbjct: 703 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 650



to top

>ref|XM_477966.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score =  159 bits (80), Expect = 1e-35
 Identities = 128/144 (88%)
 Strand = Plus / Minus

                                                                       
Query: 217 ctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgcc 276
           |||||||||||||||||||||||| ||||||||||||||||| || ||||| || || ||
Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352

                                                                       
Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcag 336
            | |||||| ||||||||||| |||||||||||||||||||   | ||||||||||||||
Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292

                                   
Query: 337 cttctgcctctcgccggacttgta 360
           |||||| | |||||||||||||||
Sbjct: 291 cttctgacgctcgccggacttgta 268



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
           ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 191 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 148



to top

>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full
           insert sequence
          Length = 1131

 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                       
Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275
           ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |  |
Sbjct: 885 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 826

                                                                       
Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335
           |||||||||| ||||| ||||| || |||||||||| ||||    | ||||| |||| ||
Sbjct: 825 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 766

                                    
Query: 336 gcttctgcctctcgccggacttgta 360
           |||| |||| |||||||||||||||
Sbjct: 765 gcttttgccgctcgccggacttgta 741



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465
           ||||| ||||||||||| ||||||||||||  ||| ||||||||
Sbjct: 664 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 621



to top

>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full
           insert sequence
          Length = 1112

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full
           insert sequence
          Length = 1105

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full
           insert sequence
          Length = 1012

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full
           insert sequence
          Length = 1040

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full
           insert sequence
          Length = 1040

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full
           insert sequence
          Length = 1012

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full
           insert sequence
          Length = 1105

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
           ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 323 ccggcgtcctgcagcttctgcc 344
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNOa0076M01, complete sequence
          Length = 36050

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                         
Query: 263   ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
             ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 32795 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 32854

                                   
Query: 323   ccggcgtcctgcagcttctgcc 344
             |||||||||   ||||||||||
Sbjct: 32855 ccggcgtccacaagcttctgcc 32876



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 277  gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327
            ||||||||||||||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 6730



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 263   ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 306
             ||||||||| | |||||||||| |||||||||||| ||||||||
Sbjct: 14044 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 14087



to top

>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNOa0023G10, complete sequence
          Length = 36253

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                        
Query: 263  ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322
            ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| 
Sbjct: 6415 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 6474

                                  
Query: 323  ccggcgtcctgcagcttctgcc 344
            |||||||||   ||||||||||
Sbjct: 6475 ccggcgtccacaagcttctgcc 6496



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 275   ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
             |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591



to top

>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 245   agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 304
             ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| ||||||
Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128

                              
Query: 305   ttaccgacgatgacata 321
             |||||||| ||| ||||
Sbjct: 86129 ttaccgacaatggcata 86145



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                          
Query: 227    tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
              ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 103264 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 103323

                                             
Query: 287    ctccactggtcgccgatgttaccgacgatga 317
               ||||||||||||| ||||| ||||||||||
Sbjct: 103324 ttccactggtcgccaatgttgccgacgatga 103354



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 277    gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327
              ||||||||||||||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 139073



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 263    ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 306
              ||||||||| | |||||||||| |||||||||||| ||||||||
Sbjct: 146387 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 146430



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 283    gtcgctccactggtcgccgatgttaccga 311
              ||||||||||||||| |||||||| ||||
Sbjct: 115625 gtcgctccactggtcaccgatgttgccga 115653



to top

>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 245   agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 304
             ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| ||||||
Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968

                              
Query: 305   ttaccgacgatgacata 321
             |||||||| ||| ||||
Sbjct: 84969 ttaccgacaatggcata 84985



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                          
Query: 227    tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
              ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 102104 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 102163

                                             
Query: 287    ctccactggtcgccgatgttaccgacgatga 317
               ||||||||||||| ||||| ||||||||||
Sbjct: 102164 ttccactggtcgccaatgttgccgacgatga 102194



to top

>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full
           insert sequence
          Length = 1168

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
           |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full
           insert sequence
          Length = 1081

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
           |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full
           insert sequence
          Length = 1081

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
           |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full
           insert sequence
          Length = 1081

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
           |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full
           insert sequence
          Length = 1096

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328
           |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full
           insert sequence
          Length = 1051

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 794 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 735

                                          
Query: 287 ctccactggtcgccgatgttaccgacgatga 317
            ||||||||||||| ||||| ||||||||||
Sbjct: 734 ttccactggtcgccaatgttgccgacgatga 704



to top

>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full
           insert sequence
          Length = 1053

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 796 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 737

                                          
Query: 287 ctccactggtcgccgatgttaccgacgatga 317
            ||||||||||||| ||||| ||||||||||
Sbjct: 736 ttccactggtcgccaatgttgccgacgatga 706



to top

>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full
           insert sequence
          Length = 1059

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 802 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 743

                                          
Query: 287 ctccactggtcgccgatgttaccgacgatga 317
            ||||||||||||| ||||| ||||||||||
Sbjct: 742 ttccactggtcgccaatgttgccgacgatga 712



to top

>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full
           insert sequence
          Length = 1074

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 795 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 736

                                          
Query: 287 ctccactggtcgccgatgttaccgacgatga 317
            ||||||||||||| ||||| ||||||||||
Sbjct: 735 ttccactggtcgccaatgttgccgacgatga 705



to top

>ref|NM_189664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
           |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 821 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 762

                           
Query: 296 tcgccgatgttaccga 311
           ||||||||||| ||||
Sbjct: 761 tcgccgatgttgccga 746



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                           
Query: 236     gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
               |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 4871431 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 4871490

                               
Query: 296     tcgccgatgttaccga 311
               ||||||||||| ||||
Sbjct: 4871491 tcgccgatgttgccga 4871506



to top

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                          
Query: 236    gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
              |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 116080 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 116139

                              
Query: 296    tcgccgatgttaccga 311
              ||||||||||| ||||
Sbjct: 116140 tcgccgatgttgccga 116155



to top

>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full
           insert sequence
          Length = 1095

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
           |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 296 tcgccgatgttaccga 311
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full
           insert sequence
          Length = 1094

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
           |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 843 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 784

                           
Query: 296 tcgccgatgttaccga 311
           ||||||||||| ||||
Sbjct: 783 tcgccgatgttgccga 768



to top

>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full
           insert sequence
          Length = 1095

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
           |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 296 tcgccgatgttaccga 311
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full
            insert sequence
          Length = 1308

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 236  gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
            |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 1057 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 998

                            
Query: 296  tcgccgatgttaccga 311
            ||||||||||| ||||
Sbjct: 997  tcgccgatgttgccga 982



to top

>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full
           insert sequence
          Length = 1095

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
           |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 296 tcgccgatgttaccga 311
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full
           insert sequence
          Length = 1114

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295
           |||| ||||||||||||||| |||   ||||| |||| ||| || | |||||||||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 296 tcgccgatgttaccga 311
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full
           insert sequence
          Length = 1100

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327
           ||||||||||||||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 710



to top

>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial
           mRNA
          Length = 840

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 274 gccgaggatgtcgctccactggtcgccgatgtt 306
           ||||| || ||||||||||||| ||||||||||
Sbjct: 696 gccgaagaagtcgctccactgggcgccgatgtt 664



to top

>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence
          Length = 249251

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 442    gacggtgatggccctctggtc 462
              |||||||||||||||||||||
Sbjct: 208833 gacggtgatggccctctggtc 208813



to top

>gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, complete sequence
          Length = 120189

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 447   tgatggccctctggtcctcagtcc 470
             |||||||||||||||| |||||||
Sbjct: 70158 tgatggccctctggtcttcagtcc 70181



to top

>ref|NM_193052.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 ttctgcctctcgccggactt 357
           ||||||||||||||||||||
Sbjct: 739 ttctgcctctcgccggactt 758



to top

>ref|NM_193043.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  ttctgcctctcgccggactt 357
            ||||||||||||||||||||
Sbjct: 1204 ttctgcctctcgccggactt 1223



to top

>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence
          Length = 194241

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     caagctctcaacaatggaaa 104
              ||||||||||||||||||||
Sbjct: 189390 caagctctcaacaatggaaa 189371



to top

>ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple myeloma transforming
           gene 2 (LOC428400), mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 cctggcggcggaggttggtgacgg 446
           ||||||||||||||| ||||||||
Sbjct: 109 cctggcggcggaggtgggtgacgg 86



to top

>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence
          Length = 130146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    tcctgcagcttctgcctctc 348
              ||||||||||||||||||||
Sbjct: 108648 tcctgcagcttctgcctctc 108629



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 283      gtcgctccactggtcgccga 302
                ||||||||||||||||||||
Sbjct: 12244752 gtcgctccactggtcgccga 12244771



to top

>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence
          Length = 127696

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aaaaacaacataacaaagat 21
              ||||||||||||||||||||
Sbjct: 119158 aaaaacaacataacaaagat 119139



to top

>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence
          Length = 175873

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    caagctctcaacaatggaaa 104
             ||||||||||||||||||||
Sbjct: 27587 caagctctcaacaatggaaa 27568



to top

>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174576

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    agctctcaacaatggaaatg 106
             ||||||||||||||||||||
Sbjct: 45528 agctctcaacaatggaaatg 45547



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 239     tcgggcagcttgaaggtgcgggcaccct 266
               |||||||||||||||| |||||| ||||
Sbjct: 1551158 tcgggcagcttgaaggcgcgggcgccct 1551185



to top

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 434     aggttggtgacggtgatggc 453
               ||||||||||||||||||||
Sbjct: 1566505 aggttggtgacggtgatggc 1566486



to top

>emb|BX950605.2| Gallus gallus finished cDNA, clone ChEST529k5
          Length = 536

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 cctggcggcggaggttggtgacgg 446
           ||||||||||||||| ||||||||
Sbjct: 195 cctggcggcggaggtgggtgacgg 172



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       taattcatagtagcaattaa 81
                ||||||||||||||||||||
Sbjct: 22025728 taattcatagtagcaattaa 22025709



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 283      gtcgctccactggtcgccga 302
                ||||||||||||||||||||
Sbjct: 12241515 gtcgctccactggtcgccga 12241534



to top

>emb|BX934717.1| Gallus gallus finished cDNA, clone ChEST114j14
          Length = 532

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 cctggcggcggaggttggtgacgg 446
           ||||||||||||||| ||||||||
Sbjct: 191 cctggcggcggaggtgggtgacgg 168



to top

>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds
          Length = 2310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 283 gtcgctccactggtcgccga 302
           ||||||||||||||||||||
Sbjct: 94  gtcgctccactggtcgccga 75



to top

>ref|XM_231590.3| PREDICTED: Rattus norvegicus plexin A4 (predicted)
           (Plxna4_predicted), mRNA
          Length = 7451

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 cggccgagccagaggcggcc 217
           ||||||||||||||||||||
Sbjct: 42  cggccgagccagaggcggcc 61



to top

>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   gtcgctccactggtcgccga 302
             ||||||||||||||||||||
Sbjct: 14285 gtcgctccactggtcgccga 14304



to top

>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506F02
          Length = 151612

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ttctgcctctcgccggactt 357
             ||||||||||||||||||||
Sbjct: 50361 ttctgcctctcgccggactt 50342



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   ttctgcctctcgccggactt 357
             ||||||||||||||||||||
Sbjct: 15084 ttctgcctctcgccggactt 15103



to top

>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0011H09
          Length = 147992

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ttctgcctctcgccggactt 357
            ||||||||||||||||||||
Sbjct: 6911 ttctgcctctcgccggactt 6892



to top

>emb|CR545466.9| Zebrafish DNA sequence from clone DKEYP-115A10 in linkage group 20,
            complete sequence
          Length = 84525

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   attaagcagcatgcaacatc 47
            ||||||||||||||||||||
Sbjct: 6109 attaagcagcatgcaacatc 6090



to top

>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1339_F05
          Length = 132708

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    ttctgcctctcgccggactt 357
              ||||||||||||||||||||
Sbjct: 108520 ttctgcctctcgccggactt 108539



to top

>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence
          Length = 124367

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 324   cggcgtcctgcagcttctgcctct 347
             ||||||||||||||| ||||||||
Sbjct: 10487 cggcgtcctgcagctgctgcctct 10464



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       taattcatagtagcaattaa 81
                ||||||||||||||||||||
Sbjct: 21954073 taattcatagtagcaattaa 21954054



to top

>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 138308

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     taattcatagtagcaattaa 81
              ||||||||||||||||||||
Sbjct: 131856 taattcatagtagcaattaa 131837


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,653,514
Number of Sequences: 3902068
Number of extensions: 3653514
Number of successful extensions: 68206
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67746
Number of HSP's gapped (non-prelim): 450
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top