>GFRA2_CHICK (O13157) GDNF family receptor alpha-2 precursor (GFR-alpha-2)|
           (Neurturin receptor alpha) (NTNR-alpha) (NRTNR-alpha)
           (GDNF receptor beta) (GDNFR-beta)
          Length = 465

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 283 PLGKSLQSWRRPVLLLRPNKLC 218
           P G+ LQ WR PV  +R NKLC
Sbjct: 26  PPGQDLQGWRVPVDCIRANKLC 47

>Y343_PYRHO (O58081) UPF0290 protein PH0343|
          Length = 170

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +3

Query: 231 GRKSRTGRRQL-----WRDFPSGTKHGTVFLVLVSNFLPQHFLKINLFHGLGILNSVCLG 395
           G+K R GRR L     WR F  G   GT+  ++    LP+++  + +   L  L S+   
Sbjct: 35  GKKWRDGRRILGDGKTWRGFFGGLIVGTIIGIVQYFLLPEYYGSLGIAIELAFLLSLGTL 94

Query: 396 *VGIVGSRLRYKSNL 440
              ++GS ++ + N+
Sbjct: 95  VGDLIGSFIKRRLNM 109

>YFIB_SPICI (P27712) Hypothetical protein in fibril gene 3'region (ORF2)|
           (Fragment)
          Length = 374

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 4   RSAQYWEIYSVCSIDLTTYGIQKLKCMVSFRTLL 105
           +++ YW  Y V +I L  +G+ K+    SFRT++
Sbjct: 122 QTSMYWVFYFVFNIPLFIFGVIKIGIRFSFRTIV 155

>Y1622_PYRAB (Q9UY86) UPF0290 protein PYRAB16220|
          Length = 171

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = +3

Query: 231 GRKSRTGRR-----QLWRDFPSGTKHGTVFLVLVSNFLPQHFLKINLFHGLGILNSVCLG 395
           G+K R GRR     + WR F  G   GTV   +     P ++  + L  G+  L S+   
Sbjct: 36  GKKWRDGRRIFGDGKTWRGFFGGITVGTVVGTIQHLMFPGYYGSLKLAVGVAFLLSLGAL 95

Query: 396 *VGIVGSRLRYKSNL 440
              ++GS ++ + N+
Sbjct: 96  VGDLIGSFIKRRLNM 110

>PIGF_HUMAN (Q07326) Phosphatidylinositol-glycan biosynthesis, class F protein|
           (PIG-F) (GPI11 homolog)
          Length = 219

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -2

Query: 322 LLTRTRNTVPCLVPLGKSLQSW-----RRPVLLLRPNKLC*SVFLSFFGAF 185
           ++  T  TVPCL  LG +L++W     R  V  +  N L  +   SF GA+
Sbjct: 117 VILSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTISSFVGAW 167

>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -1

Query: 422 ESAANYSNLAKAHAVENAKPVEKIDFEKVLRKKVAHQDEEHGSMLGATREVP 267
           ES  + SN+   + VE+A   E  DF+++  K   ++DEE    + +  ++P
Sbjct: 179 ESPVDKSNIEVVNTVEDASDDEYNDFKELSNKHGENEDEEEEEEMMSLGDLP 230


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,449,170
Number of Sequences: 219361
Number of extensions: 1231218
Number of successful extensions: 4140
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4139
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)