Clone Name | rbart21g07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GR33A_DROME (Q9VKA5) Putative gustatory receptor 33a | 29 | 6.6 | 2 | CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor | 29 | 8.6 |
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>GR33A_DROME (Q9VKA5) Putative gustatory receptor 33a| Length = 475 Score = 29.3 bits (64), Expect = 6.6 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Frame = +2 Query: 173 MRTHQLYPNKPSNQITQDKRSNQSCS-------WSSALRRNGLNLVTLTMTSCFMTISAS 331 M H++ KP+ ++ D N+ S W + NG+ L L T F T+SA+ Sbjct: 393 MIVHEIMQKKPAFMLSNDLFYNKMKSFTLQFLHWEGFFQFNGVGLFALDYTFIFSTVSAA 452 Query: 332 AGH 340 + Sbjct: 453 TSY 455
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 28.9 bits (63), Expect = 8.6 Identities = 26/88 (29%), Positives = 31/88 (35%) Frame = -2 Query: 505 GQDGLDGHQLLRAAGXXXXXXXXXXXXXRGGDDSQGQVLPRPLRVQEPHADPRAGMAGAR 326 G +GLDG + G G + S G R L + A P AG AGAR Sbjct: 175 GYNGLDGRK-----GESGTAGAKGETGAHGANGSPGPAGSRGLNGERGRAGP-AGPAGAR 228 Query: 325 RDRHEAGCHGQCHQIQAVSPQGAGPAAG 242 G G + A P G A G Sbjct: 229 GADGSTGPAGPAGPLGAAGPPGFPGAPG 256 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,894,331 Number of Sequences: 219361 Number of extensions: 1028150 Number of successful extensions: 2597 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2539 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2593 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)