ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
2dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
3gb|AY106252.1| Zea mays PCO094239 mRNA sequence 234 2e-58
4ref|XM_465315.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AK070014.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
8gb|AY106834.1| Zea mays PCO140173 mRNA sequence 100 9e-18
9gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 68 3e-08
10ref|XM_549936.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
12dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
13dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
14gb|AC154680.2| Mus musculus BAC clone RP24-313N16 from chromosom... 44 0.44
15gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 42 1.8
16gb|AC151353.2| Xenopus tropicalis clone ISB-4M1, complete sequence 42 1.8
17dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
18gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
19emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.8
20gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete... 40 6.9
21gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, co... 40 6.9
22gb|AC134795.10| Mus musculus chromosome 15, clone RP24-456M21, c... 40 6.9
23ref|XM_712875.1| Candida albicans SC5314 UDP-glucose-starch gluc... 40 6.9
24ref|XM_712809.1| Candida albicans SC5314 UDP-glucose-starch gluc... 40 6.9
25gb|BT011071.1| Drosophila melanogaster SD21488 full insert cDNA 40 6.9
26gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosom... 40 6.9
27gb|AC121948.2| Mus musculus BAC clone RP24-215A14 from 8, comple... 40 6.9
28ref|XM_950158.1| Theileria annulata strain Ankara hypothetical p... 40 6.9
29emb|BX957269.5| Zebrafish DNA sequence from clone CH211-12C22 in... 40 6.9
30emb|AL451049.11| Human DNA sequence from clone RP11-63A2 on chro... 40 6.9
31gb|AC157582.3| Mus musculus chromosome 15, clone RP24-316F24, co... 40 6.9
32emb|X91489.1|SCVIIGENE S.cerevisiae DNA from chromosome VII incl... 40 6.9
33gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome... 40 6.9
34gb|AY095050.1| Drosophila melanogaster LD39323 full insert cDNA 40 6.9
35gb|AC022398.7| Homo sapiens chromosome 10 clone RP11-491H19, com... 40 6.9
36ref|NM_057849.3| Drosophila melanogaster Chromodomain-helicase-D... 40 6.9
37gb|AC112986.16| Mus musculus chromosome 1, clone RP24-250E15, co... 40 6.9
38gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, r... 40 6.9
39emb|Z72702.1|SCYGL180W S.cerevisiae chromosome VII reading frame... 40 6.9
40gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10... 40 6.9
41gb|L77907.1|DROCHD1A Drosophila melanogaster chromodomain-helica... 40 6.9
42dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 6.9
43gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosom... 40 6.9
44gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosom... 40 6.9
45gb|AY147013.1| Leishmania major DNA polymerase I type A (POLIA) ... 40 6.9
46dbj|D29991.1| Saccharomyces cerevisiae gene for Apg1p, complete cds 40 6.9

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  325 bits (164), Expect = 8e-86
 Identities = 233/256 (91%)
 Strand = Plus / Minus

                                                                            
Query: 257      agcgccttgaggagaaacggcttgaatctggtgacattgaccatgacatcctgcttcatg 316
                ||||||||||| || |||||||||||||| || ||||| ||| |||| ||||||||||||
Sbjct: 15385499 agcgccttgagcaggaacggcttgaatcttgtcacattcaccgtgacgtcctgcttcatg 15385440

                                                                            
Query: 317      acgatctctgcgagcgccggccatccctgcgcgtggatctgcatggggttcttgaacacg 376
                |||||||| |||||||||||||| ||||||||||||||   |||||||| ||||||||||
Sbjct: 15385439 acgatctcggcgagcgccggccagccctgcgcgtggatggccatggggtccttgaacacg 15385380

                                                                            
Query: 377      tagtggtctcgggagtacttgtccttgagagtcgtctcctcctcggacacgtagtactcg 436
                |||||||| |  | ||||||||||||||| |||||||||||||| || ||||| ||||||
Sbjct: 15385379 tagtggtcccttgggtacttgtccttgagcgtcgtctcctcctccgagacgtaatactcg 15385320

                                                                            
Query: 437      acgtaccggagctgcatgtcgcgcgccggctgcccgtagaagttggtggccatccagtcc 496
                |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 15385319 acgtaccggagccgcatgtcgcgcgccggctgcccgtagaagtttgtggccatccagtcc 15385260

                                
Query: 497      atcttgccccacggca 512
                ||||||||||||||||
Sbjct: 15385259 atcttgccccacggca 15385244



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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score =  325 bits (164), Expect = 8e-86
 Identities = 233/256 (91%)
 Strand = Plus / Minus

                                                                         
Query: 257   agcgccttgaggagaaacggcttgaatctggtgacattgaccatgacatcctgcttcatg 316
             ||||||||||| || |||||||||||||| || ||||| ||| |||| ||||||||||||
Sbjct: 53014 agcgccttgagcaggaacggcttgaatcttgtcacattcaccgtgacgtcctgcttcatg 52955

                                                                         
Query: 317   acgatctctgcgagcgccggccatccctgcgcgtggatctgcatggggttcttgaacacg 376
             |||||||| |||||||||||||| ||||||||||||||   |||||||| ||||||||||
Sbjct: 52954 acgatctcggcgagcgccggccagccctgcgcgtggatggccatggggtccttgaacacg 52895

                                                                         
Query: 377   tagtggtctcgggagtacttgtccttgagagtcgtctcctcctcggacacgtagtactcg 436
             |||||||| |  | ||||||||||||||| |||||||||||||| || ||||| ||||||
Sbjct: 52894 tagtggtcccttgggtacttgtccttgagcgtcgtctcctcctccgagacgtaatactcg 52835

                                                                         
Query: 437   acgtaccggagctgcatgtcgcgcgccggctgcccgtagaagttggtggccatccagtcc 496
             |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 52834 acgtaccggagccgcatgtcgcgcgccggctgcccgtagaagtttgtggccatccagtcc 52775

                             
Query: 497   atcttgccccacggca 512
             ||||||||||||||||
Sbjct: 52774 atcttgccccacggca 52759



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>gb|AY106252.1| Zea mays PCO094239 mRNA sequence
          Length = 457

 Score =  234 bits (118), Expect = 2e-58
 Identities = 157/170 (92%)
 Strand = Plus / Minus

                                                                       
Query: 343 ctgcgcgtggatctgcatggggttcttgaacacgtagtggtctcgggagtacttgtcctt 402
           |||||||||||| ||||| |||| |||||||||||||||||| |  | ||||||||||||
Sbjct: 457 ctgcgcgtggatgtgcattgggtccttgaacacgtagtggtcccttgggtacttgtcctt 398

                                                                       
Query: 403 gagagtcgtctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgc 462
           ||| |||||||||||||| || |||||||||||||||||||||||  |||||||||||||
Sbjct: 397 gagcgtcgtctcctcctccgagacgtagtactcgacgtaccggaggcgcatgtcgcgcgc 338

                                                             
Query: 463 cggctgcccgtagaagttggtggccatccagtccatcttgccccacggca 512
           |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cggctggccgtagaagttggtggccatccagtccatcttgccccacggca 288



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>ref|XM_465315.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2113

 Score =  145 bits (73), Expect = 2e-31
 Identities = 190/229 (82%)
 Strand = Plus / Minus

                                                                        
Query: 284  ctggtgacattgaccatgacatcctgcttcatgacgatctctgcgagcgccggccatccc 343
            |||||||  ||||||  ||| |||||||||||||   || | ||||| | | ||||||||
Sbjct: 1746 ctggtgaggttgacctcgacgtcctgcttcatgatagtcgcggcgagtgtctgccatccc 1687

                                                                        
Query: 344  tgcgcgtggatctgcatggggttcttgaacacgtagtggtctcgggagtacttgtccttg 403
            || ||||||| |  | |||||| |||||||||   ||| ||||| ||||| |||| ||| 
Sbjct: 1686 tgtgcgtggagcgccttggggtccttgaacaccatgtgatctcgcgagtagttgtgcttc 1627

                                                                        
Query: 404  agagtcgtctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgcc 463
            ||  ||||||||||||||   ||||||||||| |||||||||||||||||||| | ||||
Sbjct: 1626 aggctcgtctcctcctcgccgacgtagtactccacgtaccggagctgcatgtccctcgcc 1567

                                                             
Query: 464  ggctgcccgtagaagttggtggccatccagtccatcttgccccacggca 512
            ||||||||||| |||||||| |||||||||||||| || ||||||||||
Sbjct: 1566 ggctgcccgtaaaagttggtcgccatccagtccatgttcccccacggca 1518



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  145 bits (73), Expect = 2e-31
 Identities = 190/229 (82%)
 Strand = Plus / Minus

                                                                            
Query: 284      ctggtgacattgaccatgacatcctgcttcatgacgatctctgcgagcgccggccatccc 343
                |||||||  ||||||  ||| |||||||||||||   || | ||||| | | ||||||||
Sbjct: 13369149 ctggtgaggttgacctcgacgtcctgcttcatgatagtcgcggcgagtgtctgccatccc 13369090

                                                                            
Query: 344      tgcgcgtggatctgcatggggttcttgaacacgtagtggtctcgggagtacttgtccttg 403
                || ||||||| |  | |||||| |||||||||   ||| ||||| ||||| |||| ||| 
Sbjct: 13369089 tgtgcgtggagcgccttggggtccttgaacaccatgtgatctcgcgagtagttgtgcttc 13369030

                                                                            
Query: 404      agagtcgtctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgcc 463
                ||  ||||||||||||||   ||||||||||| |||||||||||||||||||| | ||||
Sbjct: 13369029 aggctcgtctcctcctcgccgacgtagtactccacgtaccggagctgcatgtccctcgcc 13368970

                                                                 
Query: 464      ggctgcccgtagaagttggtggccatccagtccatcttgccccacggca 512
                ||||||||||| |||||||| |||||||||||||| || ||||||||||
Sbjct: 13368969 ggctgcccgtaaaagttggtcgccatccagtccatgttcccccacggca 13368921



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>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1521_G01
          Length = 144102

 Score =  145 bits (73), Expect = 2e-31
 Identities = 190/229 (82%)
 Strand = Plus / Minus

                                                                         
Query: 284   ctggtgacattgaccatgacatcctgcttcatgacgatctctgcgagcgccggccatccc 343
             |||||||  ||||||  ||| |||||||||||||   || | ||||| | | ||||||||
Sbjct: 94400 ctggtgaggttgacctcgacgtcctgcttcatgatagtcgcggcgagtgtctgccatccc 94341

                                                                         
Query: 344   tgcgcgtggatctgcatggggttcttgaacacgtagtggtctcgggagtacttgtccttg 403
             || ||||||| |  | |||||| |||||||||   ||| ||||| ||||| |||| ||| 
Sbjct: 94340 tgtgcgtggagcgccttggggtccttgaacaccatgtgatctcgcgagtagttgtgcttc 94281

                                                                         
Query: 404   agagtcgtctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgcc 463
             ||  ||||||||||||||   ||||||||||| |||||||||||||||||||| | ||||
Sbjct: 94280 aggctcgtctcctcctcgccgacgtagtactccacgtaccggagctgcatgtccctcgcc 94221

                                                              
Query: 464   ggctgcccgtagaagttggtggccatccagtccatcttgccccacggca 512
             ||||||||||| |||||||| |||||||||||||| || ||||||||||
Sbjct: 94220 ggctgcccgtaaaagttggtcgccatccagtccatgttcccccacggca 94172



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>dbj|AK070014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038E13, full
            insert sequence
          Length = 2112

 Score =  129 bits (65), Expect = 1e-26
 Identities = 189/229 (82%), Gaps = 1/229 (0%)
 Strand = Plus / Minus

                                                                        
Query: 284  ctggtgacattgaccatgacatcctgcttcatgacgatctctgcgagcgccggccatccc 343
            |||||||  ||||||  ||| |||||||||||||   || | ||||| | | ||||||||
Sbjct: 1745 ctggtgaggttgacctcgacgtcctgcttcatgatagtcgcggcgagtgtctgccatccc 1686

                                                                        
Query: 344  tgcgcgtggatctgcatggggttcttgaacacgtagtggtctcgggagtacttgtccttg 403
            || ||||||| |  | |||||| |||||||||   ||| ||||| ||||| |||| ||| 
Sbjct: 1685 tgtgcgtggagcgccttggggtccttgaacaccatgtgatctcgcgagtagttgtgcttc 1626

                                                                        
Query: 404  agagtcgtctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgcc 463
            ||  ||||||||||||||   ||||||||||| |||||||||||||||||||| | ||||
Sbjct: 1625 aggctcgtctcctcctcgccgacgtagtactccacgtaccggagctgcatgtccctcgcc 1566

                                                             
Query: 464  ggctgcccgtagaagttggtggccatccagtccatcttgccccacggca 512
            ||||||||||| ||||| || |||||||||||||| || ||||||||||
Sbjct: 1565 ggctgcccgtaaaagtt-gtcgccatccagtccatgttcccccacggca 1518



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>gb|AY106834.1| Zea mays PCO140173 mRNA sequence
          Length = 616

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 175/214 (81%), Gaps = 2/214 (0%)
 Strand = Plus / Minus

                                                                       
Query: 300 tgacatcctgcttcatgacgatctctgcgagcgccggccatccctgcgcgtggatctgca 359
           |||| ||||||||||||||| |||  ||||||||| |||| ||||||  ||||| |  ||
Sbjct: 441 tgacgtcctgcttcatgacggtctgggcgagcgcctgccacccctgcttgtggagcgcca 382

                                                                       
Query: 360 tggggttcttgaacacgtagtggtctcgggagtacttgtccttgagagtcgtctcctcct 419
           ||||||   |||||||   ||| || || | |||||||||||||||  ||||||||||| 
Sbjct: 381 tggggtcgctgaacaccacgtgctcccgcgggtacttgtccttgaggctcgtctcctccg 322

                                                                       
Query: 420 cggacacgtagtactcgacgtaccggagctgcatgtcgcgc-gccggctgcccgtagaag 478
           |    ||||||||||| | ||| ||||||  || | | ||| |||||| || ||||||||
Sbjct: 321 ccccgacgtagtactccaggtagcggagcccca-gccccgccgccggccgcgcgtagaag 263

                                             
Query: 479 ttggtggccatccagtccatcttgccccacggca 512
           ||||||||||||||||||||||||||||||||||
Sbjct: 262 ttggtggccatccagtccatcttgccccacggca 229



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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                        
Query: 451  catgtcgcgcgccggctgcccgtagaagttggtggccatccagtccatcttgccccacgg 510
            |||||||||||||||||  ||||||||||| ||||||||||| ||||||  |||| ||||
Sbjct: 8172 catgtcgcgcgccggctcgccgtagaagttcgtggccatccactccatcccgcccaacgg 8231

              
Query: 511  ca 512
            ||
Sbjct: 8232 ca 8233



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 451   catgtcgcgcgccggctgcccgtagaagttggtggccatccagtccatc 499
             |||| |||| |||||||  ||||||||||||||||||||||| ||||||
Sbjct: 11967 catgccgcgtgccggctcaccgtagaagttggtggccatccactccatc 12015



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>ref|XM_549936.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1812

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Minus

                                                                        
Query: 411  tctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgccggctgcc 470
            |||||||| | | ||||| |||||| ||||||| ||||| |||| |   |||||||   |
Sbjct: 1639 tctcctccgccgccacgtggtactccacgtacctgagctccatggccgccgccggcgcgc 1580

                                                      
Query: 471  cgtagaagttggtggccatccagtccatcttgccccacggca 512
            ||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 1579 cgtagaagttggtcgccatccactccatcctcccccacggca 1538



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 300  tgacatcctgcttcatgacgatctctgcgagcgcc 334
            ||||||||||| |||||||||| || |||||||||
Sbjct: 1750 tgacatcctgcgtcatgacgatgtcagcgagcgcc 1716



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                           
Query: 411     tctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgccggctgcc 470
               |||||||| | | ||||| |||||| ||||||| ||||| |||| |   |||||||   |
Sbjct: 1065851 tctcctccgccgccacgtggtactccacgtacctgagctccatggccgccgccggcgcgc 1065910

                                                         
Query: 471     cgtagaagttggtggccatccagtccatcttgccccacggca 512
               ||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 1065911 cgtagaagttggtcgccatccactccatcctcccccacggca 1065952



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 300     tgacatcctgcttcatgacgatctctgcgagcgcc 334
               ||||||||||| |||||||||| || |||||||||
Sbjct: 1065740 tgacatcctgcgtcatgacgatgtcagcgagcgcc 1065774



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>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0494A10
          Length = 145576

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                          
Query: 411    tctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgccggctgcc 470
              |||||||| | | ||||| |||||| ||||||| ||||| |||| |   |||||||   |
Sbjct: 103519 tctcctccgccgccacgtggtactccacgtacctgagctccatggccgccgccggcgcgc 103578

                                                        
Query: 471    cgtagaagttggtggccatccagtccatcttgccccacggca 512
              ||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 103579 cgtagaagttggtcgccatccactccatcctcccccacggca 103620



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 300    tgacatcctgcttcatgacgatctctgcgagcgcc 334
              ||||||||||| |||||||||| || |||||||||
Sbjct: 103408 tgacatcctgcgtcatgacgatgtcagcgagcgcc 103442



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>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A04
          Length = 141079

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                         
Query: 411   tctcctcctcggacacgtagtactcgacgtaccggagctgcatgtcgcgcgccggctgcc 470
             |||||||| | | ||||| |||||| ||||||| ||||| |||| |   |||||||   |
Sbjct: 35165 tctcctccgccgccacgtggtactccacgtacctgagctccatggccgccgccggcgcgc 35224

                                                       
Query: 471   cgtagaagttggtggccatccagtccatcttgccccacggca 512
             ||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 35225 cgtagaagttggtcgccatccactccatcctcccccacggca 35266



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 300   tgacatcctgcttcatgacgatctctgcgagcgcc 334
             ||||||||||| |||||||||| || |||||||||
Sbjct: 35054 tgacatcctgcgtcatgacgatgtcagcgagcgcc 35088



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>gb|AC154680.2| Mus musculus BAC clone RP24-313N16 from chromosome 13, complete sequence
          Length = 167328

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 202    accaagtaaccaaataacccaa 223
              ||||||||||||||||||||||
Sbjct: 136807 accaagtaaccaaataacccaa 136828



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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 197    aacaaaccaagtaaccaaata 217
              |||||||||||||||||||||
Sbjct: 162042 aacaaaccaagtaaccaaata 162022



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>gb|AC151353.2| Xenopus tropicalis clone ISB-4M1, complete sequence
          Length = 110908

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ctgttcccagttcagtacagg 64
             |||||||||||||||||||||
Sbjct: 50336 ctgttcccagttcagtacagg 50356



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 138      aaatcaattaagtaactttga 158
                |||||||||||||||||||||
Sbjct: 21053999 aaatcaattaagtaactttga 21054019



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 138      aaatcaattaagtaactttga 158
                |||||||||||||||||||||
Sbjct: 20980208 aaatcaattaagtaactttga 20980228



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>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    aaatcaattaagtaactttga 158
              |||||||||||||||||||||
Sbjct: 139484 aaatcaattaagtaactttga 139504



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>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence
          Length = 164920

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   gctggtccagcgccttgagg 268
             ||||||||||||||||||||
Sbjct: 70879 gctggtccagcgccttgagg 70860



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>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence
          Length = 220191

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   caacaaaccaagtaaccaaa 215
             ||||||||||||||||||||
Sbjct: 46657 caacaaaccaagtaaccaaa 46638



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>gb|AC134795.10| Mus musculus chromosome 15, clone RP24-456M21, complete sequence
          Length = 166650

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    aaaccaagtaaccaaataacccaa 223
              |||||||| |||||||||||||||
Sbjct: 106755 aaaccaagaaaccaaataacccaa 106732



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>ref|XM_712875.1| Candida albicans SC5314 UDP-glucose-starch glucosyltransferase
           (CaO19_3278), mRNA
          Length = 1986

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 aaaccaagtaaccaaataacccaa 223
           |||||||| |||||||||||||||
Sbjct: 426 aaaccaagcaaccaaataacccaa 403



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>ref|XM_712809.1| Candida albicans SC5314 UDP-glucose-starch glucosyltransferase
           (CaO19_10788), mRNA
          Length = 1986

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 aaaccaagtaaccaaataacccaa 223
           |||||||| |||||||||||||||
Sbjct: 426 aaaccaagcaaccaaataacccaa 403



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>gb|BT011071.1| Drosophila melanogaster SD21488 full insert cDNA
          Length = 5092

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  gctggtccagcgccttgagg 268
            ||||||||||||||||||||
Sbjct: 4745 gctggtccagcgccttgagg 4726



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>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete
             sequence
          Length = 150375

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   ccaacaaaccaagtaaccaa 214
             ||||||||||||||||||||
Sbjct: 78731 ccaacaaaccaagtaaccaa 78750



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>gb|AC121948.2| Mus musculus BAC clone RP24-215A14 from 8, complete sequence
          Length = 152738

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   ccccaacaaaccaagtaaccaaat 216
             |||||||||||||| |||||||||
Sbjct: 46166 ccccaacaaaccaaataaccaaat 46143



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>ref|XM_950158.1| Theileria annulata strain Ankara hypothetical protein (TA05210)
            partial mRNA
          Length = 3741

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  tggtgacattgaccatgaca 304
            ||||||||||||||||||||
Sbjct: 2190 tggtgacattgaccatgaca 2209



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>emb|BX957269.5| Zebrafish DNA sequence from clone CH211-12C22 in linkage group 6,
              complete sequence
          Length = 174814

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     tcatcacttcatcagtatgtatat 42
              ||||||||||||||| ||||||||
Sbjct: 113982 tcatcacttcatcagaatgtatat 114005



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>emb|AL451049.11| Human DNA sequence from clone RP11-63A2 on chromosome 10 Contains a novel
              gene and a CpG island, complete sequence
          Length = 166973

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    agacaaacgctctaatcaatcctg 246
              |||||||| |||||||||||||||
Sbjct: 126764 agacaaactctctaatcaatcctg 126787



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>gb|AC157582.3| Mus musculus chromosome 15, clone RP24-316F24, complete sequence
          Length = 207168

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 200   aaaccaagtaaccaaataacccaa 223
             |||||||| |||||||||||||||
Sbjct: 14715 aaaccaagaaaccaaataacccaa 14738



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>emb|X91489.1|SCVIIGENE S.cerevisiae DNA from chromosome VII including CDC55, RPS26A, COX4,
             G1380, G1601, G1604, G1607, LSR1 and G1615 genes
          Length = 16776

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 213   aaataacccaagacaaacgctcta 236
             ||||||| ||||||||||||||||
Sbjct: 13977 aaataactcaagacaaacgctcta 13954



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>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence
          Length = 226483

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   ccaacaaaccaagtaaccaa 214
             ||||||||||||||||||||
Sbjct: 48393 ccaacaaaccaagtaaccaa 48412



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>gb|AY095050.1| Drosophila melanogaster LD39323 full insert cDNA
          Length = 3483

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  gctggtccagcgccttgagg 268
            ||||||||||||||||||||
Sbjct: 3171 gctggtccagcgccttgagg 3152



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>gb|AC022398.7| Homo sapiens chromosome 10 clone RP11-491H19, complete sequence
          Length = 169184

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    agacaaacgctctaatcaatcctg 246
              |||||||| |||||||||||||||
Sbjct: 141371 agacaaactctctaatcaatcctg 141348



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>ref|NM_057849.3| Drosophila melanogaster Chromodomain-helicase-DNA-binding protein
            CG3733-RA (Chd1), mRNA
          Length = 6288

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  gctggtccagcgccttgagg 268
            ||||||||||||||||||||
Sbjct: 4745 gctggtccagcgccttgagg 4726



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>gb|AC112986.16| Mus musculus chromosome 1, clone RP24-250E15, complete sequence
          Length = 157764

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     atcacttcatcagtatgtat 40
              ||||||||||||||||||||
Sbjct: 112754 atcacttcatcagtatgtat 112773



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>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones
             DS02190 and DS00906, complete sequence
          Length = 163403

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   gctggtccagcgccttgagg 268
             ||||||||||||||||||||
Sbjct: 49063 gctggtccagcgccttgagg 49044



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>emb|Z72702.1|SCYGL180W S.cerevisiae chromosome VII reading frame ORF YGL180w
          Length = 4312

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 213  aaataacccaagacaaacgctcta 236
            ||||||| ||||||||||||||||
Sbjct: 1426 aaataactcaagacaaacgctcta 1403



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>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete
              sequence
          Length = 314957

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    gctggtccagcgccttgagg 268
              ||||||||||||||||||||
Sbjct: 151637 gctggtccagcgccttgagg 151656



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>gb|L77907.1|DROCHD1A Drosophila melanogaster chromodomain-helicase-DNA-binding (CHD-1)
            mRNA, complete cds
          Length = 6242

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  gctggtccagcgccttgagg 268
            ||||||||||||||||||||
Sbjct: 4697 gctggtccagcgccttgagg 4678



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>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008,
             complete sequence
          Length = 116223

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ttgaatctggtgacattgac 297
             ||||||||||||||||||||
Sbjct: 24859 ttgaatctggtgacattgac 24840



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>gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosome 8, complete sequence
          Length = 201346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   ccccaacaaaccaagtaaccaaat 216
             |||||||||||||| |||||||||
Sbjct: 38697 ccccaacaaaccaaataaccaaat 38720



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>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence
          Length = 193547

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ccaacaaaccaagtaaccaa 214
              ||||||||||||||||||||
Sbjct: 167969 ccaacaaaccaagtaaccaa 167988



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>gb|AY147013.1| Leishmania major DNA polymerase I type A (POLIA) mRNA, complete cds;
            nuclear gene for mitochondrial product
          Length = 2796

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  tgcgcgtggatctgcatggggttc 367
            |||||||||||||||||| |||||
Sbjct: 1202 tgcgcgtggatctgcatgaggttc 1225



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>dbj|D29991.1| Saccharomyces cerevisiae gene for Apg1p, complete cds
          Length = 3525

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 213 aaataacccaagacaaacgctcta 236
           ||||||| ||||||||||||||||
Sbjct: 724 aaataactcaagacaaacgctcta 701


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,097,550
Number of Sequences: 3902068
Number of extensions: 4097550
Number of successful extensions: 76339
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76147
Number of HSP's gapped (non-prelim): 191
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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