>gb|AC144428.1| Pan troglodytes BAC clone RP43-2C19 from 7, complete sequence
          Length = 208183

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   ccaggaaccaatcccttccac 166
             |||||||||||||||||||||
Sbjct: 72481 ccaggaaccaatcccttccac 72501

>gb|AF136169.1| Homo sapiens neuronal helix-loop-helix protein NEX-1 mRNA, complete
           cds
          Length = 1942

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 309 tcctcctcttcttctttctcggttt 285

>gb|BC035048.2| Homo sapiens neurogenic differentiation 6, mRNA (cDNA clone
           MGC:41788 IMAGE:5261681), complete cds
          Length = 1972

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 343 tcctcctcttcttctttctcggttt 319

>gb|AC025069.9| Homo sapiens chromosome 11, clone RP11-132I17, complete sequence
          Length = 159986

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   gttgagcttgtttttgcataa 299
             |||||||||||||||||||||
Sbjct: 58525 gttgagcttgtttttgcataa 58505

>gb|AC021824.7| Homo sapiens chromosome 11, clone RP11-220C23, complete sequence
          Length = 160869

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  gttgagcttgtttttgcataa 299
            |||||||||||||||||||||
Sbjct: 9294 gttgagcttgtttttgcataa 9274

>gb|AY643478.1| Edwardsiella tarda strain PPD130/91 putative type III secretion system
             gene cluster, complete sequence
          Length = 41204

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    tcctcctcttcttctgtctcg 97
             |||||||||||||||||||||
Sbjct: 25155 tcctcctcttcttctgtctcg 25135

>emb|CR624239.1| full-length cDNA clone CS0DF011YB02 of Fetal brain of Homo sapiens
           (human)
          Length = 1359

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 319 tcctcctcttcttctttctcggttt 295

>dbj|AK055238.1| Homo sapiens cDNA FLJ30676 fis, clone FCBBF2000038, highly similar
           to ATONAL PROTEIN HOMOLOG 2
          Length = 2131

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 511 tcctcctcttcttctttctcggttt 487

>dbj|AK055224.1| Homo sapiens cDNA FLJ30662 fis, clone FCBBF1000581, highly similar to
            ATONAL PROTEIN HOMOLOG 2
          Length = 2871

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 77   tcctcctcttcttctgtctcggttt 101
            ||||||||||||||| |||||||||
Sbjct: 1638 tcctcctcttcttctttctcggttt 1614

>ref|NM_022728.2| Homo sapiens neurogenic differentiation 6 (NEUROD6), mRNA
          Length = 2175

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 541 tcctcctcttcttctttctcggttt 517

>dbj|AB169577.1| Macaca fascicularis brain cDNA, clone: QnpA-11784, similar to human
           neurogenic differentiation 6 (NEUROD6), mRNA, RefSeq:
           NM_022728.2
          Length = 1984

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 341 tcctcctcttcttctttctcggttt 317

>gb|AF063609.1|AF063609 Homo sapiens brain my051 protein mRNA, complete cds
          Length = 1346

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 344 tcctcctcttcttctttctcggttt 320

>gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-463M14 from 7q15.1-p13, complete sequence
          Length = 120429

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    tcctcctcttcttctgtctcggttt 101
             ||||||||||||||| |||||||||
Sbjct: 49511 tcctcctcttcttctttctcggttt 49535

>gb|AC098811.3| Papio anubis clone RP41-367L14, complete sequence
          Length = 182644

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    tcctcctcttcttctgtctcggttt 101
             ||||||||||||||| |||||||||
Sbjct: 70256 tcctcctcttcttctttctcggttt 70280

>gb|AF248954.1| Homo sapiens MATH2 protein (MATH2) mRNA, complete cds
          Length = 2175

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 541 tcctcctcttcttctttctcggttt 517

>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence
          Length = 152283

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    ccaggaaccaatcccttccac 166
              |||||||||||||||||||||
Sbjct: 143455 ccaggaaccaatcccttccac 143475

>gb|AC024084.4|AC024084 Human Chromosome 7 clone RP11-212C18, complete sequence
          Length = 183709

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   ccaggaaccaatcccttccac 166
             |||||||||||||||||||||
Sbjct: 17863 ccaggaaccaatcccttccac 17883

>gb|BC022560.1| Homo sapiens cDNA clone IMAGE:4818263, containing frame-shift
           errors
          Length = 1967

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcttcttctgtctcggttt 101
           ||||||||||||||| |||||||||
Sbjct: 335 tcctcctcttcttctttctcggttt 311

>gb|AC116850.10| Mus musculus chromosome 8, clone RP24-396C10, complete sequence
          Length = 147264

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      caaattcccctgcatatatt 22
              ||||||||||||||||||||
Sbjct: 142924 caaattcccctgcatatatt 142943

>gb|BC077743.1| Xenopus laevis MGC78894 protein, mRNA (cDNA clone MGC:78894
           IMAGE:4174403), complete cds
          Length = 1498

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  tcctcctcttcttctgtctc 96
           ||||||||||||||||||||
Sbjct: 473 tcctcctcttcttctgtctc 454

>gb|BC007475.1| Mus musculus forkhead box I1, mRNA (cDNA clone MGC:6438
            IMAGE:3601768), complete cds
          Length = 2390

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  aaagctcaaaccaggaacca 155
            ||||||||||||||||||||
Sbjct: 1445 aaagctcaaaccaggaacca 1426

>emb|AL591468.4| Human DNA sequence from clone RP11-10J5 on chromosome 6 Contains a
             novel gene and the 5' part of a novel gene, complete
             sequence
          Length = 55261

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    acctgatgtatacacatatc 78
             ||||||||||||||||||||
Sbjct: 17766 acctgatgtatacacatatc 17747

>emb|AL671971.8| Mouse DNA sequence from clone RP23-32J15 on chromosome 11 Contains the
             Foxi1 gene for forkhead box I1 and the 3' end of the Dock2
             gene for dedicator of cyto-kinesis 2, complete sequence
          Length = 203257

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   aaagctcaaaccaggaacca 155
             ||||||||||||||||||||
Sbjct: 21393 aaagctcaaaccaggaacca 21412

>ref|NM_023907.2| Mus musculus forkhead box I1 (Foxi1), mRNA
          Length = 2357

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  aaagctcaaaccaggaacca 155
            ||||||||||||||||||||
Sbjct: 1482 aaagctcaaaccaggaacca 1463

>dbj|AK019994.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830401E05 product:forkhead homolog 10
            (Drosophila), full insert sequence
          Length = 2357

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  aaagctcaaaccaggaacca 155
            ||||||||||||||||||||
Sbjct: 1482 aaagctcaaaccaggaacca 1463

>gb|AC161214.4| Mus musculus chromosome 8, clone RP23-78A10, complete sequence
          Length = 182742

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     caaattcccctgcatatatt 22
             ||||||||||||||||||||
Sbjct: 16668 caaattcccctgcatatatt 16687

>emb|AL669938.9| Mouse DNA sequence from clone RP23-264N2 on chromosome 4, complete
              sequence
          Length = 199071

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tcctcctcttcttctgtctc 96
              ||||||||||||||||||||
Sbjct: 183407 tcctcctcttcttctgtctc 183388

>dbj|AB054648.1| TT virus DNA, complete genome, genotype 23
          Length = 3792

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 77   tcctcctcttcttctgtctcggtt 100
            ||||||||||||||||||| ||||
Sbjct: 2696 tcctcctcttcttctgtctgggtt 2673


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,126,855
Number of Sequences: 3902068
Number of extensions: 3126855
Number of successful extensions: 82560
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82529
Number of HSP's gapped (non-prelim): 31
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)