ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart21g04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 271 tgactgcgacgtcgcggctccattattgg 299 |||| |||||||||||||||||||||||| Sbjct: 801 tgacggcgacgtcgcggctccattattgg 773
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 271 tgactgcgacgtcgcggctccattattgg 299 |||| |||||||||||||||||||||||| Sbjct: 3336943 tgacggcgacgtcgcggctccattattgg 3336915
>gb|AY190948.1| Drosophila pseudoobscura clone DPSF01_06_H12 (D1436) genomic sequence Length = 43025 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgtcgccg 180 ||||||||||||||||||||||||| Sbjct: 23177 gtcgcagtcgcagtcgccgtcgccg 23201 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 155 cgtcgcagtcgcagtcgccgtcgccg 180 |||||||||||||||||| ||||||| Sbjct: 23170 cgtcgcagtcgcagtcgcagtcgccg 23195
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 271 tgactgcgacgtcgcggctccattattgg 299 |||| |||||||||||||||||||||||| Sbjct: 124306 tgacggcgacgtcgcggctccattattgg 124278
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 271 tgactgcgacgtcgcggctccattattgg 299 |||| |||||||||||||||||||||||| Sbjct: 28497 tgacggcgacgtcgcggctccattattgg 28469
>dbj|AK107775.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-B12, full insert sequence Length = 1005 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 271 tgactgcgacgtcgcggctccattattgg 299 |||| |||||||||||||||||||||||| Sbjct: 801 tgacggcgacgtcgcggctccattattgg 773
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| |||||||||||||||||||| Sbjct: 2318236 ccgtcgccgtcgcagtcgccgtcgccgc 2318263 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccggcatttcaccgaacaccttgcg 346 ||||||||||| ||||||||||||| Sbjct: 21036323 ccggcatttcatcgaacaccttgcg 21036299 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 8275720 ccgtcgccgtcgccgtcgccgtcgccgc 8275693
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| |||||||||||||||||||| Sbjct: 65735 ccgtcgccgtcgcagtcgccgtcgccgc 65762
>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence Length = 171000 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||||||||| Sbjct: 137927 tcgcagtcgcagtcgccgtcgcc 137905
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 156 gtcgcagtcgcagtcgccgtcgccgcc 182 ||||||||||||||||| ||||||||| Sbjct: 1510177 gtcgcagtcgcagtcgcagtcgccgcc 1510151
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 156 gtcgcagtcgcagtcgccgtcgccgcc 182 ||||||||||||||||| ||||||||| Sbjct: 2844932 gtcgcagtcgcagtcgcagtcgccgcc 2844906
>ref|NM_001014459.1| Drosophila melanogaster dpr3 CG33516-PA (dpr3) mRNA, complete cds Length = 1848 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 tcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||||||||| Sbjct: 859 tcgcagtcgcagtcgccgtcgcc 881
>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete sequence Length = 346734 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||||||||| Sbjct: 182611 tcgcagtcgcagtcgccgtcgcc 182589
>gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 DS00164 (D269)), complete sequence Length = 86391 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||||||||| Sbjct: 38743 tcgcagtcgcagtcgccgtcgcc 38721
>gb|AY190953.1| Drosophila virilis clone DVIF01_19_E15 (D1419) genomic sequence Length = 43320 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgtcg 177 |||||||||||||||||||||| Sbjct: 14489 gtcgcagtcgcagtcgccgtcg 14510
>ref|XM_380838.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00662.1) partial mRNA Length = 2100 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cgcagtcgcagtcgccgtcgcc 179 |||||||||||||||||||||| Sbjct: 302 cgcagtcgcagtcgccgtcgcc 323
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 agtcgccgtcgccgcctcggcc 188 |||||||||||||||||||||| Sbjct: 105351 agtcgccgtcgccgcctcggcc 105372
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 agtcgccgtcgccgcctcggcc 188 |||||||||||||||||||||| Sbjct: 20374718 agtcgccgtcgccgcctcggcc 20374739
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 153 accgtcgcagtcgcagtcgccgtcgccgcc 182 |||||||| ||||| ||||||||||||||| Sbjct: 6346080 accgtcgccgtcgccgtcgccgtcgccgcc 6346109 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 ggcatttcaccgaacaccttgcgtg 348 ||||||||||| ||||||||||||| Sbjct: 9609976 ggcatttcacccaacaccttgcgtg 9609952 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 1721284 ccgtcgccgtcgccgtcgccgtcgccgcc 1721256 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 tcgcagtcgcagtcgccgtcgccgcctc 184 |||| ||||| ||||||||||||||||| Sbjct: 22838609 tcgccgtcgccgtcgccgtcgccgcctc 22838636 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 20178299 cgtcgccgtcgccgtcgccgtcgccgcc 20178272
>dbj|AK120232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H21, full insert sequence Length = 835 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 agtcgccgtcgccgcctcggcc 188 |||||||||||||||||||||| Sbjct: 88 agtcgccgtcgccgcctcggcc 109
>dbj|AK108959.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-D01, full insert sequence Length = 666 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 153 accgtcgcagtcgcagtcgccgtcgccgcc 182 |||||||| ||||| ||||||||||||||| Sbjct: 92 accgtcgccgtcgccgtcgccgtcgccgcc 63
>dbj|AK063658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B11, full insert sequence Length = 496 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 153 accgtcgcagtcgcagtcgccgtcgccgcc 182 |||||||| ||||| ||||||||||||||| Sbjct: 63 accgtcgccgtcgccgtcgccgtcgccgcc 34
>dbj|AK062016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F06, full insert sequence Length = 752 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 agtcgccgtcgccgcctcggcc 188 |||||||||||||||||||||| Sbjct: 51 agtcgccgtcgccgcctcggcc 72
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 153 accgtcgcagtcgcagtcgccgtcgccgcc 182 |||||||| ||||| ||||||||||||||| Sbjct: 6345955 accgtcgccgtcgccgtcgccgtcgccgcc 6345984 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 ggcatttcaccgaacaccttgcgtg 348 ||||||||||| ||||||||||||| Sbjct: 9609861 ggcatttcacccaacaccttgcgtg 9609837 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 1721260 ccgtcgccgtcgccgtcgccgtcgccgcc 1721232 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 tcgcagtcgcagtcgccgtcgccgcctc 184 |||| ||||| ||||||||||||||||| Sbjct: 22766800 tcgccgtcgccgtcgccgtcgccgcctc 22766827 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 20104513 cgtcgccgtcgccgtcgccgtcgccgcc 20104486
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 153 accgtcgcagtcgcagtcgccgtcgccgcc 182 |||||||| ||||| ||||||||||||||| Sbjct: 7628 accgtcgccgtcgccgtcgccgtcgccgcc 7657
>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence Length = 147128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aaacactcttttcttttatat 58 ||||||||||||||||||||| Sbjct: 53863 aaacactcttttcttttatat 53843
>ref|XM_482551.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccggcatttcaccgaacaccttgcg 346 ||||||||||| ||||||||||||| Sbjct: 562 ccggcatttcatcgaacaccttgcg 538
>ref|XM_463319.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 152 caccgtcgcagtcgcagtcgccgtcgccg 180 ||||||||| ||||| ||||||||||||| Sbjct: 950 caccgtcgccgtcgccgtcgccgtcgccg 922
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 85954 ccgtcgccgtcgccgtcgccgtcgccgcc 85982
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgccgcctcggc 187 |||||||| | ||||| ||||||||||||||| |||| Sbjct: 169368 tcaccgtcaccgtcgccgtcgccgtcgccgccgcggc 169404
>gb|AC138003.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0020C11, complete sequence Length = 30321 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgccgcctcggc 187 |||||||| | ||||| ||||||||||||||| |||| Sbjct: 19582 tcaccgtcaccgtcgccgtcgccgtcgccgccgcggc 19546
>gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 map MAP_LOC, complete sequence Length = 146091 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ttttatatctcaacttctcaa 71 ||||||||||||||||||||| Sbjct: 54640 ttttatatctcaacttctcaa 54660
>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence Length = 119525 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ttttatatctcaacttctcaa 71 ||||||||||||||||||||| Sbjct: 42006 ttttatatctcaacttctcaa 41986
>gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p13, complete sequence Length = 91226 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ttttatatctcaacttctcaa 71 ||||||||||||||||||||| Sbjct: 78298 ttttatatctcaacttctcaa 78278
>gb|AY735112.1| Streptomyces hygroscopicus mannopeptimycin biosynthetic gene cluster, complete sequence Length = 48200 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgc 178 ||||||||||||||||||| ||||| Sbjct: 32241 ccgtcgcagtcgcagtcgcagtcgc 32265
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 23366 ccgtcgccgtcgccgtcgccgtcgccgcc 23338
>gb|AY177423.1| Trypanosoma cruzi B3 adaptin-like protein mRNA, complete cds Length = 2889 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 tctttcctttacaaacactcttttctttt 54 |||||||||||||| ||||||||| |||| Sbjct: 54 tctttcctttacaagcactcttttttttt 26
>gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete sequence Length = 140874 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ccggcatttcaccgaacacct 342 ||||||||||||||||||||| Sbjct: 98295 ccggcatttcaccgaacacct 98315
>gb|AY126835.1| Drosophila dunni thomasensis isolate PRT5 Yellow protein precursor (y) gene, exon 1 and partial cds Length = 526 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cgcagtcgcagtcgccgtcgc 178 ||||||||||||||||||||| Sbjct: 121 cgcagtcgcagtcgccgtcgc 101
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 cgcagtcgcagtcgccgtcgccgcc 182 ||||||||||||||| ||||||||| Sbjct: 162363 cgcagtcgcagtcgcagtcgccgcc 162339
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 33565 ccgtcgccgtcgccgtcgccgtcgccgcc 33537
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgccgcctcggc 187 |||||||| | ||||| ||||||||||||||| |||| Sbjct: 7828580 tcaccgtcaccgtcgccgtcgccgtcgccgccgcggc 7828544 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgccgcctcggcc 188 |||| ||||| ||||||||||||||| ||||| Sbjct: 27114382 tcgccgtcgccgtcgccgtcgccgccgcggcc 27114351
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 8753512 ccgtcgccgtcgccgtcgccgtcgccgcc 8753540
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 147 tcgctcaccgtcgcagtcgcagtcgccgt 175 |||||||||||||| ||||| |||||||| Sbjct: 35581123 tcgctcaccgtcgccgtcgccgtcgccgt 35581151 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 6172912 ccgtcgccgtcgccgtcgccgtcgccgc 6172939
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 152 caccgtcgcagtcgcagtcgccgtcgccg 180 ||||||||| ||||| ||||||||||||| Sbjct: 21825452 caccgtcgccgtcgccgtcgccgtcgccg 21825480 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gcagtcgcagtcgccgtcgccgcc 182 |||||||||||||||| ||||||| Sbjct: 43136252 gcagtcgcagtcgccgccgccgcc 43136229 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 accgtcgcagtcgcagtcgc 172 |||||||||||||||||||| Sbjct: 32271538 accgtcgcagtcgcagtcgc 32271519 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gtcgccgtcgccgcctcggc 187 |||||||||||||||||||| Sbjct: 32158773 gtcgccgtcgccgcctcggc 32158792 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 28731334 cggcatttcaccgaacacct 28731353 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 cgtcgcagtcgcagtcgccgtcgc 178 |||||| ||||||||||||||||| Sbjct: 17556933 cgtcgccgtcgcagtcgccgtcgc 17556956 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gctcggttgcttgcttgctt 378 |||||||||||||||||||| Sbjct: 9912591 gctcggttgcttgcttgctt 9912572
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 152 caccgtcgcagtcgcagtcgccgtcgccg 180 ||||||||| ||||| ||||||||||||| Sbjct: 54745 caccgtcgccgtcgccgtcgccgtcgccg 54773
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccggcatttcaccgaacaccttgcg 346 ||||||||||| ||||||||||||| Sbjct: 102498 ccggcatttcatcgaacaccttgcg 102474
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 147 tcgctcaccgtcgcagtcgcagtcgccgt 175 |||||||||||||| ||||| |||||||| Sbjct: 97515 tcgctcaccgtcgccgtcgccgtcgccgt 97543
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccggcatttcaccgaacaccttgcg 346 ||||||||||| ||||||||||||| Sbjct: 7533 ccggcatttcatcgaacaccttgcg 7509
>dbj|AK119426.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-H08, full insert sequence Length = 3395 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccggcatttcaccgaacaccttgcg 346 ||||||||||| ||||||||||||| Sbjct: 562 ccggcatttcatcgaacaccttgcg 538
>gb|AY109498.1| Zea mays CL28_-2 mRNA sequence Length = 2150 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 gtcgcagtcgcagtcgccgtcgccgcctc 184 ||||||||||||||||| ||||| ||||| Sbjct: 889 gtcgcagtcgcagtcgcagtcgctgcctc 861
>gb|AF522029.1| Momordica charantia auxin influx carrier-like protein 2 (AIC2) mRNA, complete cds Length = 2787 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgtcgccg 180 ||||||||||||||||| ||||||| Sbjct: 309 gtcgcagtcgcagtcgcagtcgccg 333
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgccgcctcggc 187 |||||||| | ||||| ||||||||||||||| |||| Sbjct: 7898667 tcaccgtcaccgtcgccgtcgccgtcgccgccgcggc 7898631 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgccgcctcggcc 188 |||| ||||| ||||||||||||||| ||||| Sbjct: 27441435 tcgccgtcgccgtcgccgtcgccgccgcggcc 27441404
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165137 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 ggcatttcaccgaacaccttgcgtg 348 ||||||||||| ||||||||||||| Sbjct: 73287 ggcatttcacccaacaccttgcgtg 73263
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 119200 ccgtcgccgtcgccgtcgccgtcgccgcc 119228
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgcc 182 ||||||| ||||| ||||||||||||||| Sbjct: 45637 ccgtcgccgtcgccgtcgccgtcgccgcc 45665
>gb|AC140947.1| Gallus gallus BAC clone TAM33-40B24 from chromosome ul, complete sequence Length = 229639 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ctcttttcttttatatctcaa 63 ||||||||||||||||||||| Sbjct: 211667 ctcttttcttttatatctcaa 211647
>emb|AL691493.17| Mouse DNA sequence from clone RP23-264D18 on chromosome X, complete sequence Length = 202742 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 365 ttgcttgcttgcttccccatgcctt 389 |||||||||||||||||| |||||| Sbjct: 171718 ttgcttgcttgcttccccctgcctt 171742
>ref|XM_469030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cagtcgcagtcgccgtcgcc 179 |||||||||||||||||||| Sbjct: 235 cagtcgcagtcgccgtcgcc 216
>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence Length = 186002 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gtcgcagtcgccgtcgccgc 181 |||||||||||||||||||| Sbjct: 53523 gtcgcagtcgccgtcgccgc 53504
>ref|NM_192177.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1872 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 147 cggcatttcaccgaacacct 128
>ref|NM_191359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 357 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gtcgccgtcgccgcctcggc 187 |||||||||||||||||||| Sbjct: 76 gtcgccgtcgccgcctcggc 95
>ref|NM_189502.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gcagtcgcagtcgccgtcgccgcc 182 |||||||||||||||| ||||||| Sbjct: 90 gcagtcgcagtcgccgccgccgcc 67
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cagtcgcagtcgccgtcgcc 179 |||||||||||||||||||| Sbjct: 140985 cagtcgcagtcgccgtcgcc 140966
>gb|AC159456.1| Trypanosoma brucei chromosome 8 clone RPCI93-6H23, complete sequence Length = 169646 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||| |||||| Sbjct: 25314 gtcgcagtcgcagtcgcagtcgcc 25337
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||| |||||| Sbjct: 2269109 gtcgcagtcgcagtcgcagtcgcc 2269132
>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 142935 ccgtcgccgtcgccgtcgccgtcgccgc 142962
>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence Length = 182182 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcctcgg 186 |||||||||||| ||||| ||||||| ||||| Sbjct: 175762 cgtcgcagtcgccgtcgctgtcgccgtctcgg 175731
>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence Length = 184662 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcctcgg 186 |||||||||||| ||||| ||||||| ||||| Sbjct: 93225 cgtcgcagtcgccgtcgctgtcgccgtctcgg 93194
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgc 178 |||||||||||||||||| ||||| Sbjct: 199012 cgtcgcagtcgcagtcgcagtcgc 198989
>ref|XM_322802.1| Neurospora crassa OR74A hypothetical protein (NCU03545.1) partial mRNA Length = 6930 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgc 178 |||| ||||||||||||||||| ||||| Sbjct: 115 tcacagtcgcagtcgcagtcgcagtcgc 142
>ref|XM_951731.1| Neurospora crassa OR74A hypothetical protein (NCU03545.1) partial mRNA Length = 6930 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgc 178 |||| ||||||||||||||||| ||||| Sbjct: 115 tcacagtcgcagtcgcagtcgcagtcgc 142
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 gctcggttgcttgcttgcttcccc 382 ||||| |||||||||||||||||| Sbjct: 93802 gctcgcttgcttgcttgcttcccc 93825
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cagtcgcagtcgccgtcgcc 179 |||||||||||||||||||| Sbjct: 25024540 cagtcgcagtcgccgtcgcc 25024521 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 12407061 cgtcgccgtcgccgtcgccgtcgccgcc 12407034 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 7265059 ccgtcgccgtcgccgtcgccgtcgccgc 7265032
>ref|XM_819938.1| Trypanosoma brucei TREU927 clone RPCI93-6H23 hypothetical protein (Tb927.8.7800) partial mRNA Length = 3603 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgtcgcc 179 ||||||||||||||||| |||||| Sbjct: 669 gtcgcagtcgcagtcgcagtcgcc 692
>ref|XM_445756.1| Candida glabrata CBS138, CAGL0E01551g partial mRNA Length = 693 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgc 178 |||| ||||||||||||||||| ||||| Sbjct: 613 tcacagtcgcagtcgcagtcgcagtcgc 640
>gb|AC117599.14| Mus musculus chromosome 1, clone RP23-426D21, complete sequence Length = 195683 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cacacatggccatgcatgcg 99 |||||||||||||||||||| Sbjct: 179965 cacacatggccatgcatgcg 179984
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cagtcgcagtcgccgtcgcc 179 |||||||||||||||||||| Sbjct: 56347 cagtcgcagtcgccgtcgcc 56328
>emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2 Length = 37467 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gtcgcagtcgccgtcgccgc 181 |||||||||||||||||||| Sbjct: 16807 gtcgcagtcgccgtcgccgc 16788
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgc 178 |||| ||||||||||||||||| ||||| Sbjct: 147196 tcacagtcgcagtcgcagtcgcagtcgc 147169
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 tcaccgtcgcagtcgcagtcgccgtcgc 178 |||| ||||||||||||||||| ||||| Sbjct: 94039 tcacagtcgcagtcgcagtcgcagtcgc 94012
>emb|AJ890151.1| Scophthalmus maximus mRNA for antimicrobial peptide precursor (TAPP gene) Length = 320 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 ctcaccgtcgcagtcgcagtcgccgtcg 177 |||||||| ||||||||||| ||||||| Sbjct: 36 ctcaccgttgcagtcgcagtggccgtcg 63
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 66079 cgtcgccgtcgccgtcgccgtcgccgcc 66052
>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0047M04, complete sequence Length = 109523 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgccgcctcggcc 188 |||| ||||| ||||||||||||||| ||||| Sbjct: 65435 tcgccgtcgccgtcgccgtcgccgccgcggcc 65404
>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194979 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcg 177 |||||||||||||||||| ||||| Sbjct: 119122 ccgtcgcagtcgcagtcgacgtcg 119099
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179205 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tcgcagtcgccgtcgccgcc 182 |||||||||||||||||||| Sbjct: 89987 tcgcagtcgccgtcgccgcc 89968
>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164941 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgt 175 |||||||||||||||||||| Sbjct: 48756 gtcgcagtcgcagtcgccgt 48775
>gb|AC104610.13| Drosophila melanogaster 3L BAC RP98-35J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 138534 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 gcagtcgcagtcgccgtcgccgcctcgg 186 ||||||| |||||||||||| ||||||| Sbjct: 23212 gcagtcgtagtcgccgtcgctgcctcgg 23239
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcg 177 |||||||||||||||||| ||||| Sbjct: 137423 ccgtcgcagtcgcagtcgacgtcg 137446
>gb|AC092888.4| Homo sapiens 12 BAC RP11-597C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 atctttcctttacaaacact 44 |||||||||||||||||||| Sbjct: 143236 atctttcctttacaaacact 143255
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 16315 ccgtcgccgtcgccgtcgccgtcgccgc 16288
>ref|NM_166983.1| Drosophila melanogaster Mnt CG13316-RA, transcript variant A (Mnt), mRNA Length = 2444 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gtcgcagtcgccgtcgccgc 181 |||||||||||||||||||| Sbjct: 30 gtcgcagtcgccgtcgccgc 49
>ref|NM_132057.2| Drosophila melanogaster Glutamate receptor binding protein CG14447-RA (Grip), mRNA Length = 3759 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcgcagtcgccgtcgccgcc 182 |||||||||||||||||||| Sbjct: 59 tcgcagtcgccgtcgccgcc 78
>gb|AF026202.1| Caenorhabditis elegans cosmid C10E2, complete sequence Length = 32480 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 actcttttcttttatatctc 61 |||||||||||||||||||| Sbjct: 11962 actcttttcttttatatctc 11981
>gb|AY075457.1| Drosophila melanogaster RE14068 full length cDNA Length = 3780 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcgcagtcgccgtcgccgcc 182 |||||||||||||||||||| Sbjct: 59 tcgcagtcgccgtcgccgcc 78
>dbj|AK078333.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530401I16 product:ELAV-LIKE PROTEIN 1 (HU-ANTIGEN R) (HUR) (ELAV-LIKE GENERIC PROTEIN) (MELG) homolog [Mus musculus], full insert sequence Length = 1820 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 379 ccgtcgccgtcgccgtcgccgtcgccgc 406
>dbj|AK080365.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630073F18 product:ELAV-LIKE PROTEIN 1 (HU-ANTIGEN R) (HUR) (ELAV-LIKE GENERIC PROTEIN) (MELG), full insert sequence Length = 2426 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 21 ccgtcgccgtcgccgtcgccgtcgccgc 48
>dbj|AK034536.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430002B02 product:ELAV-LIKE PROTEIN 1 (HU-ANTIGEN R) (HUR) (ELAV-LIKE GENERIC PROTEIN) (MELG) homolog [Mus musculus], full insert sequence Length = 2453 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 50 ccgtcgccgtcgccgtcgccgtcgccgc 77
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 gcagtcgcagtcgccgtcgccgcc 182 |||||||||||||| ||||||||| Sbjct: 393297 gcagtcgcagtcgcagtcgccgcc 393320
>dbj|AK075818.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010107C19 product:ELAV-LIKE PROTEIN 1 (HU-ANTIGEN R) (HUR) (ELAV-LIKE GENERIC PROTEIN) (MELG) homolog [Mus musculus], full insert sequence Length = 1266 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 25 ccgtcgccgtcgccgtcgccgtcgccgc 52
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 2487066 cggcatttcaccgaacacct 2487085
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 4682894 cggcatttcaccgaacacct 4682913
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cagtcgcagtcgccgtcgcc 179 |||||||||||||||||||| Sbjct: 25115857 cagtcgcagtcgccgtcgcc 25115838 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 12403824 cgtcgccgtcgccgtcgccgtcgccgcc 12403797 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 7262954 ccgtcgccgtcgccgtcgccgtcgccgc 7262927
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gcagtcgcagtcgccgtcgccgcc 182 |||||||||||||||| ||||||| Sbjct: 133281 gcagtcgcagtcgccgccgccgcc 133258
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 accgtcgcagtcgcagtcgc 172 |||||||||||||||||||| Sbjct: 142291 accgtcgcagtcgcagtcgc 142272 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gtcgccgtcgccgcctcggc 187 |||||||||||||||||||| Sbjct: 29526 gtcgccgtcgccgcctcggc 29545
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gcagtcgcagtcgccgtcgccgcc 182 |||||||||||||||| ||||||| Sbjct: 23707 gcagtcgcagtcgccgccgccgcc 23684
>ref|XM_344063.2| PREDICTED: Rattus norvegicus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) (predicted) (Elavl1_predicted), mRNA Length = 2600 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 219 ccgtcgccgtcgccgtcgccgtcgccgc 246
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 91812 ccgtcgccgtcgccgtcgccgtcgccgc 91785
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 114408 cggcatttcaccgaacacct 114427
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gctcggttgcttgcttgctt 378 |||||||||||||||||||| Sbjct: 48357 gctcggttgcttgcttgctt 48338
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 cgtcgcagtcgcagtcgccgtcgc 178 |||||| ||||||||||||||||| Sbjct: 74505 cgtcgccgtcgcagtcgccgtcgc 74528
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 73656 cggcatttcaccgaacacct 73675
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tcgccgtcgccgcctcggcc 188 |||||||||||||||||||| Sbjct: 60547 tcgccgtcgccgcctcggcc 60528
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 accgtcgcagtcgcagtcgc 172 |||||||||||||||||||| Sbjct: 3823 accgtcgcagtcgcagtcgc 3804
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 804 cggcatttcaccgaacacct 823
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 138394 ccgtcgccgtcgccgtcgccgtcgccgc 138421
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 15829 ccgtcgccgtcgccgtcgccgtcgccgc 15802
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_H02 Length = 117860 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcgccgc 181 ||||||| ||||| |||||||||||||| Sbjct: 108402 ccgtcgccgtcgccgtcgccgtcgccgc 108375
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 gctcggttgcttgcttgcttcccc 382 ||||| |||||||||||||||||| Sbjct: 144991 gctcgcttgcttgcttgcttcccc 144968
>dbj|AK100107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N09, full insert sequence Length = 2327 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gctcggttgcttgcttgctt 378 |||||||||||||||||||| Sbjct: 227 gctcggttgcttgcttgctt 208
>dbj|AK072388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079B04, full insert sequence Length = 2152 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 199 cgtcgccgtcgccgtcgccgtcgccgcc 226
>dbj|AK071002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078P05, full insert sequence Length = 850 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 216 cgtcgccgtcgccgtcgccgtcgccgcc 243
>dbj|AK067683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115G11, full insert sequence Length = 2243 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gctcggttgcttgcttgctt 378 |||||||||||||||||||| Sbjct: 90 gctcggttgcttgcttgctt 71
>dbj|AK067598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D23, full insert sequence Length = 1195 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 157 tcgcagtcgcagtcgccgtcgccgcctcggcc 188 |||| ||||| ||||||||||||||| ||||| Sbjct: 211 tcgccgtcgccgtcgccgtcgccgccgcggcc 242
>dbj|AK065111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O02, full insert sequence Length = 4130 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 cgtcgcagtcgcagtcgccgtcgc 178 |||||| ||||||||||||||||| Sbjct: 65 cgtcgccgtcgcagtcgccgtcgc 88
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcatttcaccgaacacct 342 |||||||||||||||||||| Sbjct: 90267 cggcatttcaccgaacacct 90286
>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the complete sequence Length = 226075 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcctcgg 186 |||||||||||| ||||| ||||||| ||||| Sbjct: 102186 cgtcgcagtcgccgtcgctgtcgccgtctcgg 102155
>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete sequence Length = 295143 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gtcgcagtcgcagtcgccgt 175 |||||||||||||||||||| Sbjct: 280833 gtcgcagtcgcagtcgccgt 280852
>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete sequence Length = 295875 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ccgtcgcagtcgcagtcgccgtcg 177 |||||||||||||||||| ||||| Sbjct: 179675 ccgtcgcagtcgcagtcgacgtcg 179652
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 gcagtcgcagtcgccgtcgccgcctcgg 186 ||||||| |||||||||||| ||||||| Sbjct: 54599 gcagtcgtagtcgccgtcgctgcctcgg 54626
>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete sequence Length = 317322 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcgcagtcgccgtcgccgcc 182 |||||||||||||||||||| Sbjct: 49263 tcgcagtcgccgtcgccgcc 49282
>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gtcgcagtcgccgtcgccgc 181 |||||||||||||||||||| Sbjct: 126407 gtcgcagtcgccgtcgccgc 126426
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 157 tcgcagtcgcagtcgccgtcgccgcctc 184 |||| ||||| ||||||||||||||||| Sbjct: 118235 tcgccgtcgccgtcgccgtcgccgcctc 118208
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152862 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 cgtcgcagtcgcagtcgccgtcgccgcc 182 |||||| ||||| ||||||||||||||| Sbjct: 42533 cgtcgccgtcgccgtcgccgtcgccgcc 42506
>gb|AC144947.4| Mus musculus BAC clone RP23-319M19 from 1, complete sequence Length = 185575 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cacacatggccatgcatgcg 99 |||||||||||||||||||| Sbjct: 84367 cacacatggccatgcatgcg 84386
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gctcggttgcttgcttgctt 378 |||||||||||||||||||| Sbjct: 7084 gctcggttgcttgcttgctt 7065 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,903,229 Number of Sequences: 3902068 Number of extensions: 4903229 Number of successful extensions: 115429 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112378 Number of HSP's gapped (non-prelim): 2955 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
