>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 169 TNKTKWPPRPCRRGHICSIYSEQHENDDTNHGNKNPDDRLQPSSPIQAPD 318
           T   K PPR CR+G+ C  Y   H + D     +    R  P   ++  D
Sbjct: 218 TEPCKKPPRLCRQGYACPYY---HNSKDRRRSPRKHKYRSSPCPNVKHGD 264

>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 169 TNKTKWPPRPCRRGHICSIYSEQHENDDTNHGNKNPDDRLQPSSPIQAPD 318
           T   K PPR CR+G+ C  Y   H + D     +    R  P   ++  D
Sbjct: 218 TEPCKKPPRLCRQGYACPYY---HNSKDRRRSPRKHKYRSSPCPNVKHGD 264

>ZC3H5_CANFA (Q6EE22) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 169 TNKTKWPPRPCRRGHICSIYSEQHENDDTNHGNKNPDDRLQPSSPIQAPD 318
           T   K PPR CR+G+ C  Y   H + D     +    R  P   ++  D
Sbjct: 218 TEPCKKPPRLCRQGYACPYY---HNSKDRRRSPRKHKYRSSPCPNVKHGD 264

>TBX6_BRARE (P79742) T-box transcription factor TBX6 (T-box protein 6)|
          Length = 473

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 11/72 (15%)
 Frame = +1

Query: 145 QSHRNLRLTNKTKWPPRPCRRGHICSIY----------SEQHENDDTNHGNKNPDDRLQP 294
           Q+H  L L+N+    PR      +C+            S    N    H N  P  +LQP
Sbjct: 301 QTHTLLSLSNRHFSSPRESNLNSVCAALPVSQLSTGHTSFSRLNPQETHHNSRPKIQLQP 360

Query: 295 SSP-IQAPDTDV 327
             P +Q  D DV
Sbjct: 361 PHPSLQCHDLDV 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,866,270
Number of Sequences: 219361
Number of extensions: 854016
Number of successful extensions: 2226
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)