Clone Name | rbart21f11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYIM_MACFA (Q4R646) Isoleucyl-tRNA synthetase, mitochondrial pre... | 30 | 1.7 | 2 | SYIM_MOUSE (Q8BIJ6) Isoleucyl-tRNA synthetase, mitochondrial pre... | 29 | 2.9 | 3 | SYIM_HUMAN (Q9NSE4) Isoleucyl-tRNA synthetase, mitochondrial pre... | 29 | 2.9 | 4 | MOK12_SCHPO (Q9UUL4) Cell wall alpha-1,3-glucan synthase mok12 (... | 28 | 6.4 |
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>SYIM_MACFA (Q4R646) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) (Fragment) Length = 993 Score = 30.0 bits (66), Expect = 1.7 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 Query: 82 LLHWTIRDEFILTSQTMPHLCICISQHG 165 + H +DE+++ SQT+ H+ + QHG Sbjct: 515 VFHHKTKDEYLINSQTIEHIVKLVEQHG 542
>SYIM_MOUSE (Q8BIJ6) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) Length = 1012 Score = 29.3 bits (64), Expect = 2.9 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 Query: 82 LLHWTIRDEFILTSQTMPHLCICISQHG 165 + H +DE+++ SQT H+ + QHG Sbjct: 534 VFHHKTKDEYLINSQTTEHIIKLVEQHG 561
>SYIM_HUMAN (Q9NSE4) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) Length = 1012 Score = 29.3 bits (64), Expect = 2.9 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 Query: 82 LLHWTIRDEFILTSQTMPHLCICISQHG 165 + H +DE+++ SQT H+ + QHG Sbjct: 534 VFHHKTKDEYLINSQTTEHIVKLVEQHG 561
>MOK12_SCHPO (Q9UUL4) Cell wall alpha-1,3-glucan synthase mok12 (EC 2.4.1.183)| Length = 2352 Score = 28.1 bits (61), Expect = 6.4 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 Query: 16 SLFHIRKQACMKWLHIG*HIYQLLH 90 S+F+I K C K++ G H++ LLH Sbjct: 1351 SIFNIEKDICTKYVQFG-HVFNLLH 1374 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,609,961 Number of Sequences: 219361 Number of extensions: 747564 Number of successful extensions: 1538 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1522 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1538 length of database: 80,573,946 effective HSP length: 51 effective length of database: 69,386,535 effective search space used: 1665276840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)