Clone Name | rbart21f11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC154225.2| Mus musculus BAC clone RP24-352F3 from chromosome 13, complete sequence Length = 157586 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 cacacttgtgtatatgtatat 154 ||||||||||||||||||||| Sbjct: 112981 cacacttgtgtatatgtatat 113001
>gb|AC132306.3| Mus musculus BAC clone RP24-289O21 from 3, complete sequence Length = 151208 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gtatatcccaacatgggcttc 169 ||||||||||||||||||||| Sbjct: 103389 gtatatcccaacatgggcttc 103409
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 40.1 bits (20), Expect = 2.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 110 tcatccttacatcccagaccatgccacacttg 141 |||||||| |||||| |||| ||||||||||| Sbjct: 17094 tcatccttgcatccctgaccctgccacacttg 17125
>gb|AC164406.5| Mus musculus chromosome 3, clone RP24-391L20, complete sequence Length = 134552 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aatacaaatttcagtctatt 23 |||||||||||||||||||| Sbjct: 51635 aatacaaatttcagtctatt 51654
>gb|AC087369.5| Homo sapiens chromosome 8, clone RP11-728L1, complete sequence Length = 193872 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 acacttgtgtatatgtatat 154 |||||||||||||||||||| Sbjct: 111695 acacttgtgtatatgtatat 111714
>gb|AC008615.8| Homo sapiens chromosome 5 clone CTB-144A14, complete sequence Length = 115306 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgtgtatatgtatatcccaa 159 |||||||||||||||||||| Sbjct: 48923 tgtgtatatgtatatcccaa 48942
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 110 tcatccttacatcccagaccatgccacacttg 141 |||||||| |||||| |||| ||||||||||| Sbjct: 17640336 tcatccttgcatccctgaccctgccacacttg 17640367
>dbj|AK069708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031M23, full insert sequence Length = 2455 Score = 40.1 bits (20), Expect = 2.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 110 tcatccttacatcccagaccatgccacacttg 141 |||||||| |||||| |||| ||||||||||| Sbjct: 1388 tcatccttgcatccctgaccctgccacacttg 1357 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,472,999 Number of Sequences: 3902068 Number of extensions: 2472999 Number of successful extensions: 223454 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 223337 Number of HSP's gapped (non-prelim): 117 length of query: 227 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 205 effective length of database: 17,147,199,772 effective search space: 3515175953260 effective search space used: 3515175953260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)