>CHD8_HUMAN (Q9HCK8) Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-)|
           (ATP-dependent helicase CHD8) (CHD-8) (Helicase with
           SNF2 domain 1)
          Length = 2302

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
 Frame = -2

Query: 251 VQSWSQEFGRWAELTECRNHIKMAAGSVFRVYDC-----------GIVPVDYLIQAFG*N 105
           + +W +EF  W E+     H  +A+  + + Y+            G    D LI  F   
Sbjct: 592 ITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMI 651

Query: 104 IEESWLLREPVY-CV*LNTAHTPPKRNRCMLI 12
           + +   LRE  + CV ++ AH    RN C L+
Sbjct: 652 LSDCPELREIEWRCVIIDEAHRLKNRN-CKLL 682

>MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-type|
           frizzled-related protein)
          Length = 584

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +3

Query: 207 GQLCPTPKFLAPRLNMPDLYRPLVHESWH 293
           G L P P       N PDLY PL H  WH
Sbjct: 151 GGLLPGPSGFFSSPNYPDLYPPLSHCVWH 179

>PRKDC_CHICK (Q8QGX4) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs)
          Length = 4134

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
 Frame = +3

Query: 315  EELFLAMTSGISNLMDFSEFRARVL----TNGSCMRYRWITRCQRNHIIKKILSWKLPNN 482
            + L  A TS + +       R RV     + G  + +  IT      ++KK +SW   N+
Sbjct: 828  QRLRKAKTSSLDDNPSLEAVRTRVARLLGSLGGQINHNLITATSAEEMMKKCVSWDTKNH 887

Query: 483  ISFLISF 503
            +SF + F
Sbjct: 888  LSFAVPF 894

>NOS_LYMST (O61309) Nitric-oxide synthase (EC 1.14.13.39) (NOS type I) (Neuronal|
            NOS) (N-NOS) (nNOS)
          Length = 1153

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 68   NTLVLVVTNSPQCSSQMPESDNPLAQCHN 154
            NT++   T  P C + MP  +N +  C N
Sbjct: 942  NTMLSCETTIPSCENSMPSCENTMPSCEN 970


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,321,237
Number of Sequences: 219361
Number of extensions: 1632401
Number of successful extensions: 4093
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4089
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)