Clone Name | rbart21f06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC ... | 39 | 0.005 | 2 | YAE9_YEAST (P39721) Protein YAL049C | 37 | 0.035 | 3 | DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.... | 30 | 3.3 | 4 | EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts) | 30 | 4.3 | 5 | MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscl... | 29 | 5.6 |
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>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 39.3 bits (90), Expect = 0.005 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = -2 Query: 475 EDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVL 377 +D+KEVK PI +LGA+ D T+PP+ V +F VL Sbjct: 181 DDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 36.6 bits (83), Expect = 0.035 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Frame = -2 Query: 478 VEDIKEV--KCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGITHFVKIFPGVSHGWTVRY 305 +E+I+ + K PI + AE D P L E+ L N T+ + +F GV+HG+ R Sbjct: 160 IEEIEAIDSKKPILISAAEEDHIFPANLRHLTEEKLKDNHA-TYQLDLFSGVAHGFAARG 218 Query: 304 KSEDAGAVKSAEEALSHMIDWFS 236 + E+ L I WF+ Sbjct: 219 DISIPAVKYAKEKVLLDQIYWFN 241
>DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 267 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/74 (21%), Positives = 35/74 (47%) Frame = -2 Query: 451 PIAVLGAEIDKTSPPELVKQFEQVLSSNSGITHFVKIFPGVSHGWTVRYKSEDAGAVKSA 272 P+ L D + P E ++ Q L + + + ++P H + Y+ + +SA Sbjct: 185 PVLGLYGGKDTSIPAEHIETMRQALRAANADAEII-VYPEAGHAFNADYRP--SYHAESA 241 Query: 271 EEALSHMIDWFSKN 230 ++ M+DWF+++ Sbjct: 242 QDGWQRMLDWFTQH 255
>EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts)| Length = 287 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = -2 Query: 424 DKTSPPELVKQFEQVLSSNSGITHFVKIFPGVSHGWTVRYKSEDAGAVKSAE 269 DKT+ EL+KQ + + N G+ FV+ G EDA A ++AE Sbjct: 247 DKTTVAELLKQTSKAVGDNLGVARFVRFQLG-----------EDAAAEEAAE 287
>MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscle, 25 kDa| isoform (LC25) Length = 195 Score = 29.3 bits (64), Expect = 5.6 Identities = 19/71 (26%), Positives = 35/71 (49%) Frame = -2 Query: 439 LGAEIDKTSPPELVKQFEQVLSSNSGITHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEAL 260 +G E+D P++VK+ + THF+ +F HG DA A+ E+ L Sbjct: 87 IGREVD----PKVVKEMLAESAEKLNFTHFLTLFGEKLHGTDTEGTLRDAFALFD-EDKL 141 Query: 259 SHMIDWFSKNL 227 ++++ + K+L Sbjct: 142 GYLLEEYVKDL 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,853,836 Number of Sequences: 219361 Number of extensions: 1347060 Number of successful extensions: 2980 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2930 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2980 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)