ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
2dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
3dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
4gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
6dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
7gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, comp... 46 0.10
8gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, com... 46 0.10
9gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, com... 42 1.6
10emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in ... 42 1.6
11emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, comp... 42 1.6
12gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosom... 42 1.6
13gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence 42 1.6
14dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 42 1.6
15gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene,... 42 1.6
16gb|AY104092.1| Zea mays PCO081688 mRNA sequence 42 1.6
17gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, co... 42 1.6
18emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, c... 42 1.6
19gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence 40 6.5
20ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome reg... 40 6.5
21ref|XM_761472.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.5
22emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on ch... 40 6.5
23gb|AC096953.4| Homo sapiens BAC clone RP11-272G21 from 4, comple... 40 6.5
24emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 6.5
25gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, co... 40 6.5
26gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, co... 40 6.5
27gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Canc... 40 6.5
28gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complet... 40 6.5
29gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complet... 40 6.5
30emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chr... 40 6.5 
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
           insert sequence
          Length = 1014

 Score =  184 bits (93), Expect = 2e-43
 Identities = 219/261 (83%)
 Strand = Plus / Minus

                                                                       
Query: 219 attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 278
           |||||||  ||||||||  |||||||||| ||||| |  | |||||||||||| || |||
Sbjct: 757 attcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctc 698

                                                                       
Query: 279 ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 338
           || |||||| |||| || ||| | |||||||||||||||||||||||   ||||||||||
Sbjct: 697 ttgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggg 638

                                                                       
Query: 339 aatatcttgacaaagtgagtaatccctgagttagaggacagaacctgctcgaactgcttg 398
           || ||||||||||||||   ||||||||| || || || |||||||||||||||||||| 
Sbjct: 637 aagatcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttc 578

                                                                       
Query: 399 accaattctggtggggatgttttgtcaatttcagctccaagtacagctatggggcatttc 458
           |||| ||||||||||||  |    ||||||||||||||||||| ||| || |||||||| 
Sbjct: 577 accacttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttg 518

                                
Query: 459 acctctttgatatcttcaaca 479
           |||||||| ||||| ||||||
Sbjct: 517 acctctttcatatcatcaaca 497
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>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
           insert sequence
          Length = 1127

 Score =  174 bits (88), Expect = 2e-40
 Identities = 211/252 (83%)
 Strand = Plus / Minus

                                                                       
Query: 228 aggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactcttcacagca 287
           ||||||||  |||||||||| ||||| |  | |||||||||||| || ||||| ||||||
Sbjct: 932 aggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttgacagca 873

                                                                       
Query: 288 cctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccagggaatatcttg 347
            |||| || ||| | |||||||||||||||||||||||   |||||||||||| ||||||
Sbjct: 872 gctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaagatcttg 813

                                                                       
Query: 348 acaaagtgagtaatccctgagttagaggacagaacctgctcgaactgcttgaccaattct 407
           ||||||||   ||||||||| || || || ||||||||||||||||||||  ||| ||||
Sbjct: 812 acaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctccacttct 753

                                                                       
Query: 408 ggtggggatgttttgtcaatttcagctccaagtacagctatggggcatttcacctctttg 467
           ||||||||  |    ||||||||||||||||||| ||| || |||||||| |||||||| 
Sbjct: 752 ggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacctctttc 693

                       
Query: 468 atatcttcaaca 479
           ||||| ||||||
Sbjct: 692 atatcatcaaca 681
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>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
           insert sequence
          Length = 1127

 Score =  174 bits (88), Expect = 2e-40
 Identities = 211/252 (83%)
 Strand = Plus / Minus

                                                                       
Query: 228 aggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactcttcacagca 287
           ||||||||  |||||||||| ||||| |  | |||||||||||| || ||||| ||||||
Sbjct: 932 aggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttgacagca 873

                                                                       
Query: 288 cctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccagggaatatcttg 347
            |||| || ||| | |||||||||||||||||||||||   |||||||||||| ||||||
Sbjct: 872 gctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaagatcttg 813

                                                                       
Query: 348 acaaagtgagtaatccctgagttagaggacagaacctgctcgaactgcttgaccaattct 407
           ||||||||   ||||||||| || || || ||||||||||||||||||||  ||| ||||
Sbjct: 812 acaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctccacttct 753

                                                                       
Query: 408 ggtggggatgttttgtcaatttcagctccaagtacagctatggggcatttcacctctttg 467
           ||||||||  |    ||||||||||||||||||| ||| || |||||||| |||||||| 
Sbjct: 752 ggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacctctttc 693

                       
Query: 468 atatcttcaaca 479
           ||||| ||||||
Sbjct: 692 atatcatcaaca 681
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  105 bits (53), Expect = 1e-19
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                         
Query: 219   attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 278
             |||||||  ||||||||  |||||||||| ||||| |  | |||||||||||| || |||
Sbjct: 73162 attcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctc 73103

                                                                         
Query: 279   ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 338
             || |||||| |||| || ||| | |||||||||||||||||||||||   ||||||||||
Sbjct: 73102 ttgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggg 73043

                              
Query: 339   aatatcttgacaaagtg 355
             || ||||||||||||||
Sbjct: 73042 aagatcttgacaaagtg 73026



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                         
Query: 219   attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 278
             |||||||  ||||||||  |||||||||||||||| | || |||||||||||| || |||
Sbjct: 66629 attcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctc 66570

                                                                         
Query: 279   ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 338
             || |||||| | || || |||   |||||||| || |||||||||||    |||||||||
Sbjct: 66569 ttgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggg 66510

                               
Query: 339   aatatcttgacaaagtga 356
             || |||||||||||||||
Sbjct: 66509 aagatcttgacaaagtga 66492



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 378   agaacctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctcca 437
             |||||||||||||||||||| |||| ||||||||||||  |    |||||||||||||||
Sbjct: 72353 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 72294

                                        
Query: 438   agtacagctatggggcatttcacctct 464
             |||| ||| || |||||||| ||||||
Sbjct: 72293 agtatagcaattgggcatttgacctct 72267



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                         
Query: 260   cagggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtcca 319
             ||||||||||||||| ||||| || ||| |||| || ||    ||||||||||||| |||
Sbjct: 82752 cagggcttcctcagcgctcttgacggcagctgcatcatcgtgattgtatctcacagccca 82693

                                                        
Query: 320   tccatgagaaaccccagggaatatcttgacaaagtgagtaatc 362
             ||||||    || || ||||| |||||||| ||||||| ||||
Sbjct: 82692 tccatgctctacgccggggaaaatcttgacgaagtgagcaatc 82650



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 383   ctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaagta 441
             |||||| |||||||| | ||  |||||||| || || |||||||||||||| |||||||
Sbjct: 77716 ctgctcaaactgctttaacagctctggtggagacgtcttgtcaatttcagcaccaagta 77658
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 1e-19
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                            
Query: 219      attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 278
                |||||||  ||||||||  |||||||||| ||||| |  | |||||||||||| || |||
Sbjct: 19269087 attcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctc 19269028

                                                                            
Query: 279      ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 338
                || |||||| |||| || ||| | |||||||||||||||||||||||   ||||||||||
Sbjct: 19269027 ttgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggg 19268968

                                 
Query: 339      aatatcttgacaaagtg 355
                || ||||||||||||||
Sbjct: 19268967 aagatcttgacaaagtg 19268951



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                            
Query: 219      attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 278
                |||||||  ||||||||  |||||||||||||||| | || |||||||||||| || |||
Sbjct: 19262554 attcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctc 19262495

                                                                            
Query: 279      ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 338
                || |||||| | || || |||   |||||||| || |||||||||||    |||||||||
Sbjct: 19262494 ttgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggg 19262435

                                  
Query: 339      aatatcttgacaaagtga 356
                || |||||||||||||||
Sbjct: 19262434 aagatcttgacaaagtga 19262417



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                            
Query: 378      agaacctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctcca 437
                |||||||||||||||||||| |||| ||||||||||||  |    |||||||||||||||
Sbjct: 19268278 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 19268219

                                           
Query: 438      agtacagctatggggcatttcacctct 464
                |||| ||| || |||||||| ||||||
Sbjct: 19268218 agtatagcaattgggcatttgacctct 19268192



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                            
Query: 260      cagggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtcca 319
                ||||||||||||||| ||||| || ||| |||| || ||    ||||||||||||| |||
Sbjct: 19278677 cagggcttcctcagcgctcttgacggcagctgcatcatcgtgattgtatctcacagccca 19278618

                                                           
Query: 320      tccatgagaaaccccagggaatatcttgacaaagtgagtaatc 362
                ||||||    || || ||||| |||||||| ||||||| ||||
Sbjct: 19278617 tccatgctctacgccggggaaaatcttgacgaagtgagcaatc 19278575



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 383      ctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaagta 441
                |||||| |||||||| | ||  |||||||| || || |||||||||||||| |||||||
Sbjct: 19273641 ctgctcaaactgctttaacagctctggtggagacgtcttgtcaatttcagcaccaagta 19273583
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>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
           insert sequence
          Length = 1039

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 167/210 (79%)
 Strand = Plus / Minus

                                                                       
Query: 260 cagggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtcca 319
           ||||||||||||||| ||||| || ||| |||| || ||    ||||||||||||| |||
Sbjct: 727 cagggcttcctcagcgctcttgacggcagctgcatcatcgtgattgtatctcacagccca 668

                                                                       
Query: 320 tccatgagaaaccccagggaatatcttgacaaagtgagtaatccctgagttagaggacag 379
           ||||||    || || ||||| |||||||| ||||||| |||| | | |||||  || ||
Sbjct: 667 tccatgctctacgccggggaaaatcttgacgaagtgagcaatctcggggttaggagaaag 608

                                                                       
Query: 380 aacctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaag 439
            | |||||| |||||||| | ||  |||||||| || || |||||||||||||| |||||
Sbjct: 607 gatctgctcaaactgctttaacagctctggtggagacgtcttgtcaatttcagcaccaag 548

                                         
Query: 440 tacagctatggggcatttcacctctttgat 469
           || ||  || |||||||| || ||||||||
Sbjct: 547 tatagaaattgggcatttgacttctttgat 518
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>gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, complete sequence
          Length = 187726

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 310    tcacagtccatccatgagaaacc 332
              |||||||||||||||||||||||
Sbjct: 150944 tcacagtccatccatgagaaacc 150966
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>gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, complete sequence
          Length = 152182

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 310   tcacagtccatccatgagaaacc 332
             |||||||||||||||||||||||
Sbjct: 43232 tcacagtccatccatgagaaacc 43210
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>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence
          Length = 177661

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     gcatttttatttcagtgcaat 35
              |||||||||||||||||||||
Sbjct: 165660 gcatttttatttcagtgcaat 165680
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>emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2,
             complete sequence
          Length = 223248

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 379   gaacctgctcgaactgcttga 399
             |||||||||||||||||||||
Sbjct: 44432 gaacctgctcgaactgcttga 44412
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>emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, complete sequence
          Length = 37310

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     aacaacaaatatcgcattttt 22
             |||||||||||||||||||||
Sbjct: 28423 aacaacaaatatcgcattttt 28403
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>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete sequence
          Length = 196765

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     gcatttttatttcagtgcaat 35
              |||||||||||||||||||||
Sbjct: 178095 gcatttttatttcagtgcaat 178075
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>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence
          Length = 133452

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 329    aaccccagggaatatcttgac 349
              |||||||||||||||||||||
Sbjct: 132550 aaccccagggaatatcttgac 132530
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>dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930053D13
            product:unclassifiable, full insert sequence
          Length = 2672

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 15   gcatttttatttcagtgcaat 35
            |||||||||||||||||||||
Sbjct: 2218 gcatttttatttcagtgcaat 2238
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>gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene, complete cds
          Length = 152141

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   aaccccagggaatatcttgac 349
             |||||||||||||||||||||
Sbjct: 22787 aaccccagggaatatcttgac 22807
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>gb|AY104092.1| Zea mays PCO081688 mRNA sequence
          Length = 1359

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaagtaca 443
           |||||||| |||||||| || |||||||||||  |    || || ||||||||||||| |
Sbjct: 880 tgctcgaattgcttgactaactctggtggggacctcacatccatctcagctccaagtata 821

                                        
Query: 444 gctatggggcatttcacctctttgatatc 472
           |  || | |||||| ||||||||||||||
Sbjct: 820 gagattgagcatttgacctctttgatatc 792
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>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence
          Length = 166952

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   tcacagtccatccatgagaaa 330
             |||||||||||||||||||||
Sbjct: 55129 tcacagtccatccatgagaaa 55109
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>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence
          Length = 152969

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   gaacctgctcgaactgcttga 399
             |||||||||||||||||||||
Sbjct: 24222 gaacctgctcgaactgcttga 24242
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>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence
          Length = 1139

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 384 tgctcgaactgcttgaccaattctggtgggga 415
           |||||||| |||||||| || |||||||||||
Sbjct: 749 tgctcgaattgcttgactaactctggtgggga 718
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>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on
             chromosome 15
          Length = 755217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gcatttttatttcagtgcaa 34
             ||||||||||||||||||||
Sbjct: 43621 gcatttttatttcagtgcaa 43602
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>ref|XM_761472.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_1044) partial mRNA
          Length = 2622

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 18   tttttatttcagtgcaatagtatt 41
            |||||||||||||||||| |||||
Sbjct: 2137 tttttatttcagtgcaatcgtatt 2114
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>emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on chromosome 6 Contains a
             novel pseudogene and an ADH5 (alcohol dehydrogenase 5
             (class III) chi polypeptide) pseudogene, complete sequence
          Length = 171220

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   ggcatttcacctctttgatatctt 474
             |||||||||||||| |||||||||
Sbjct: 56361 ggcatttcacctctctgatatctt 56384
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>gb|AC096953.4| Homo sapiens BAC clone RP11-272G21 from 4, complete sequence
          Length = 184152

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     caaatatcgcatttttatttcagt 30
             ||||||||||| ||||||||||||
Sbjct: 42476 caaatatcgcaattttatttcagt 42499
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete
              sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    ggatgttttgtcaatttcag 432
              ||||||||||||||||||||
Sbjct: 117354 ggatgttttgtcaatttcag 117335
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>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence
          Length = 203244

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gcatttttatttcagtgcaa 34
             ||||||||||||||||||||
Sbjct: 44165 gcatttttatttcagtgcaa 44184
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>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence
          Length = 174707

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gcatttttatttcagtgcaa 34
             ||||||||||||||||||||
Sbjct: 43621 gcatttttatttcagtgcaa 43602
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>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158176

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    taaaccctggatgattacat 163
              ||||||||||||||||||||
Sbjct: 150394 taaaccctggatgattacat 150375
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>gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complete sequence
          Length = 275269

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    taggttcttgctaaaccagt 246
              ||||||||||||||||||||
Sbjct: 217924 taggttcttgctaaaccagt 217905
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>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence
          Length = 186518

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    tctggtggggatgttttgtcaatt 428
              ||||||||||||||||| ||||||
Sbjct: 137328 tctggtggggatgttttctcaatt 137351
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>emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chromosome X, complete
              sequence
          Length = 130107

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 267    tcctcagcactcttcacagcacct 290
              |||||||||| |||||||||||||
Sbjct: 126575 tcctcagcacccttcacagcacct 126552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,465,625
Number of Sequences: 3902068
Number of extensions: 4465625
Number of successful extensions: 72112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72013
Number of HSP's gapped (non-prelim): 91
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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