ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart21e09 |
|---|---|
| Clone Library Name | barley_pub |
>GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 55.5 bits (132), Expect = 8e-08 Identities = 24/52 (46%), Positives = 34/52 (65%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ S F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 55.5 bits (132), Expect = 8e-08 Identities = 24/52 (46%), Positives = 34/52 (65%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ S F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 55.5 bits (132), Expect = 8e-08 Identities = 24/52 (46%), Positives = 34/52 (65%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ S F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) (SMG p25A GDI) Length = 447 Score = 55.5 bits (132), Expect = 8e-08 Identities = 24/52 (46%), Positives = 34/52 (65%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ S F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 53.5 bits (127), Expect = 3e-07 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 53.5 bits (127), Expect = 3e-07 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) Length = 447 Score = 53.5 bits (127), Expect = 3e-07 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)| (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) (XAP-4) (Oligophrenin-2) Length = 447 Score = 53.5 bits (127), Expect = 3e-07 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+D+ F + D YEP+++ F S SYDATTHFETT D+ ++Y + G Sbjct: 375 PIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAG 426
>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1| Length = 440 Score = 53.1 bits (126), Expect = 4e-07 Identities = 24/52 (46%), Positives = 34/52 (65%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 PV E F + + YEPV + + D C++S S DAT+HFET DV ++Y +TG Sbjct: 375 PVVESFSRVQEIYEPVTDGTKDQCYISKSVDATSHFETLTCDVRDIYKRMTG 426
>GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Secretory| pathway GDP dissociation inhibitor) Length = 451 Score = 50.4 bits (119), Expect = 3e-06 Identities = 21/52 (40%), Positives = 35/52 (67%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P++E F + + +EP + S DN ++S SYDA++HFE+ DV ++Y +TG Sbjct: 386 PIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFESMTDDVKDIYFRVTG 437
>GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 47.8 bits (112), Expect = 2e-05 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D P + + F+S +YDATTHFETT D+ N+Y +TG Sbjct: 375 PIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTG 426
>GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 47.8 bits (112), Expect = 2e-05 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D P + + F+S +YDATTHFETT D+ N+Y +TG Sbjct: 375 PIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTG 426
>GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) (GDI-3) Length = 445 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/52 (38%), Positives = 33/52 (63%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D + P + + F+S +YDATTHFETT D+ ++Y +TG Sbjct: 375 PIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTG 426
>GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) (GDI-3) Length = 445 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/52 (38%), Positives = 33/52 (63%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D + P + + F+S +YDATTHFETT D+ ++Y +TG Sbjct: 375 PIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTG 426
>GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 46.6 bits (109), Expect = 4e-05 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D P + + F+S +YDATTHFETT D+ N+Y +TG Sbjct: 375 PIEQKFVSISDLLVPKDLGTESLIFISRTYDATTHFETTCDDIKNIYKRMTG 426
>GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 45.1 bits (105), Expect = 1e-04 Identities = 20/52 (38%), Positives = 32/52 (61%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D P + + F+S +YDATTHFETT D+ ++Y +TG Sbjct: 375 PIEQKFVSISDLLVPKDLGTDSQIFISRTYDATTHFETTCGDIKDIYKRMTG 426
>GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI beta)| (Guanosine diphosphate dissociation inhibitor 2) (GDI-2) Length = 445 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITG 354 P+++ F + D P + + F+S +YDATTHFETT D+ ++Y + G Sbjct: 375 PIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKDIYKRMMG 426
>TAAR2_MOUSE (Q5QD17) Trace amine-associated receptor 2 (G-protein coupled| receptor 58) Length = 339 Score = 30.0 bits (66), Expect = 3.8 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -3 Query: 162 YAKLLSVEWCWFPSLTSLLIHWVVNIILY*QWL*HVDVRLVDVFYS 25 Y+ + SVE CW+ LT IH+ +++L + H+ VD FY+ Sbjct: 87 YSMVRSVENCWYFGLTFCKIHYSFDLMLSITSIFHLCSVAVDRFYA 132
>CSN1_XENLA (Q6NRT5) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 487 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +2 Query: 245 WCTSRKYVLKKILGLLRSNTLLQRWQH 325 +CTS K+V+ L +++ + LQ W H Sbjct: 187 YCTSAKHVINMCLNVIKVSVYLQNWSH 213
>CSN1_RAT (P97834) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (MFH protein) Length = 471 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +2 Query: 245 WCTSRKYVLKKILGLLRSNTLLQRWQH 325 +CTS K+V+ L +++ + LQ W H Sbjct: 171 YCTSAKHVINMCLNVIKVSVYLQNWSH 197
>CSN1_MOUSE (Q99LD4) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) Length = 471 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +2 Query: 245 WCTSRKYVLKKILGLLRSNTLLQRWQH 325 +CTS K+V+ L +++ + LQ W H Sbjct: 171 YCTSAKHVINMCLNVIKVSVYLQNWSH 197
>CSN1_HUMAN (Q13098) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) (MFH protein) Length = 471 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +2 Query: 245 WCTSRKYVLKKILGLLRSNTLLQRWQH 325 +CTS K+V+ L +++ + LQ W H Sbjct: 171 YCTSAKHVINMCLNVIKVSVYLQNWSH 197
>TAAR2_HUMAN (Q9P1P5) Trace amine-associated receptor 2 (G-protein coupled| receptor 58) Length = 351 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = -3 Query: 162 YAKLLSVEWCWFPSLTSLLIHWVVNIILY*QWL*HVDVRLVDVFYSYTY 16 Y+ + SVE CW+ LT I++ +++L + H+ +D FY+ Y Sbjct: 99 YSMIRSVENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICY 147
>TAAR2_RAT (Q5QD25) Trace amine-associated receptor 2 (G-protein coupled| receptor 58) Length = 339 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -3 Query: 162 YAKLLSVEWCWFPSLTSLLIHWVVNIILY*QWL*HVDVRLVDVFYS 25 Y+ + SVE CW+ LT IH+ +++L + H+ +D FY+ Sbjct: 87 YSMVRSVENCWYFGLTFCKIHYSFDLMLSITSIFHLCSVAIDRFYA 132
>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) Length = 591 Score = 29.3 bits (64), Expect = 6.5 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%) Frame = -1 Query: 470 EPVNEPSLDN-----CFVSSSYDATTHFE--TTVTDVLNMYTL 363 EP +P+ + C++S SYD TT +E T +T V+ Y L Sbjct: 29 EPRQQPNCNTASNRACWISGSYDITTDYEVKTPLTGVVRQYDL 71
>APA2_YEAST (P22108) 5',5'''-P-1,P-4-tetraphosphate phosphorylase 2 (EC| 2.7.7.53) (Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase) (AP-4-A phosphorylase) (Ap4A phosphorylase II) (AP,A phosphorylase) (ATP adenylyltransferase) Length = 325 Score = 28.9 bits (63), Expect = 8.5 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -2 Query: 241 ESYCVMVTCDISCVLCRS---SGPRLLAALREIIICGMVLV 128 +SY V++T CV+ RS SGP L+ + CGM+LV Sbjct: 247 KSYNVLLTKKWICVVPRSHAKSGPPLMLNINSTGYCGMILV 287
>LEPA_TREDE (P60794) GTP-binding protein lepA| Length = 601 Score = 28.9 bits (63), Expect = 8.5 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -1 Query: 509 PVDELFFDMYDRYEPVNEPSLDNCFVSSSYDATTHFETTVTDVLNMYTLITGK 351 P+ E+ FD YDR + S+ + S Y+ ET TD+ + LI GK Sbjct: 450 PLAEVLFDFYDRLK-----SISRGYASFDYEV---IETRPTDLAKIDILINGK 494
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -2 Query: 274 LQDILPGGTPPESYCVMVTCDISCVLCRSSGPRLL 170 +Q LP G PP TC I C+LC S P L Sbjct: 573 VQPPLPPGAPPPP-----TCSIECLLCLLSSPNSL 602 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,618,844 Number of Sequences: 219361 Number of extensions: 1297877 Number of successful extensions: 3167 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3167 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
