ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B r... 58 1e-05
2gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex sub... 54 2e-04
3gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote... 52 7e-04
4gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete ... 46 0.045
5gb|AC140547.18| Medicago truncatula clone mth2-17p16, complete s... 44 0.18
6gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete se... 44 0.18
7gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 42 0.70
8emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on... 42 0.70
9gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete se... 42 0.70
10emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gen... 42 0.70
11gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 42 0.70
12emb|BX322538.9| Zebrafish DNA sequence from clone CH211-245G11 i... 42 0.70
13gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcript... 42 0.70
14gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence 42 0.70
15gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 42 0.70
16gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar N... 42 0.70
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
19dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
20gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance ge... 42 0.70
21gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein... 42 0.70
22emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1... 42 0.70
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.70
24dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 0.70
25gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 40 2.8
26gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.8
27gb|AC112260.6| Mus musculus BAC clone RP23-185L5 from chromosome... 40 2.8
28gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosom... 40 2.8
29gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete se... 40 2.8
30gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete s... 40 2.8
31gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 40 2.8
32gb|AC067844.6| Homo sapiens chromosome 8, clone RP11-234A3, comp... 40 2.8
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
35dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
36dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
37gb|AC107209.4| Homo sapiens BAC clone RP11-4F12 from 2, complete... 40 2.8
38dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
39gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-6... 40 2.8
40gb|U15057.1|HIU15057 Haemophilus influenzae SB32 transferrin bin... 40 2.8
41gb|AC148983.2| Mus musculus BAC clone RP23-189G7 from 18, comple... 40 2.8
42emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2-35p1... 40 2.8
43dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 2.8 
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant
          Length = 4946

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 97   aatcttaaaaaggtcttatatttaagaacggatggaatata 137
            |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 1255 aatctttaaaaggtcttatatttaggaacggatggagtata 1215



 Score = 46.1 bits (23), Expect = 0.045
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 106  aaggtcttatatttaagaacgga 128
            |||||||||||||||||||||||
Sbjct: 1165 aaggtcttatatttaagaacgga 1187
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>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098
           cyclic nucleotide-gated ion channel 4 (Nec1) gene,
           complete cds
          Length = 9090

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 94  tggaatcttaaaaaggtcttatatttaagaacgga 128
           ||||||||| |||||||||||||||| ||||||||
Sbjct: 225 tggaatctttaaaaggtcttatattttagaacgga 191
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>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 83    ctagtttgtattggaatcttaaaaaggtcttatatttaagaacgga 128
             ||||||| || || |||||| ||||||||||||||||| |||||||
Sbjct: 61118 ctagtttatagtgtaatctttaaaaggtcttatatttaggaacgga 61163
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>gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete sequence
          Length = 128294

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 111   cttatatttaagaacggatggaatata 137
             |||||||||||||||||||||| ||||
Sbjct: 27927 cttatatttaagaacggatggagtata 27953
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>gb|AC140547.18| Medicago truncatula clone mth2-17p16, complete sequence
          Length = 123189

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 103   aaaaaggtcttatatttaagaacgga 128
             ||||| ||||||||||||||||||||
Sbjct: 71424 aaaaaagtcttatatttaagaacgga 71399
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>gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete sequence
          Length = 108548

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 103   aaaaaggtcttatatttaagaacgga 128
             ||||| ||||||||||||||||||||
Sbjct: 30205 aaaaaagtcttatatttaagaacgga 30180
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 104   aaaaggtcttatatttaagaacgga 128
             |||||||||||||||| ||||||||
Sbjct: 23182 aaaaggtcttatattttagaacgga 23206



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    aatcttaaaaaggtcttatattta 120
             |||||| |||||||||||||||||
Sbjct: 23089 aatctttaaaaggtcttatattta 23066
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>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete
             sequence
          Length = 100991

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 110   tcttatatttaagaacggatggaatataa 138
             |||||||||| |||||||||||| |||||
Sbjct: 96734 tcttatatttcagaacggatggagtataa 96762
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>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence
          Length = 100985

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 110   tcttatatttaagaacggatggaatataa 138
             |||||||||| |||||||||||| |||||
Sbjct: 96735 tcttatatttcagaacggatggagtataa 96763
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>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA
             polymerase, chloroplast precursor, exons 1-19
          Length = 10573

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 104   aaaaggtcttatatttaagaacgga 128
             ||||||||||||||||| |||||||
Sbjct: 10418 aaaaggtcttatatttaggaacgga 10394
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 104    aaaaggtcttatatttaagaacgga 128
              |||||||||||||||| ||||||||
Sbjct: 217200 aaaaggtcttatattttagaacgga 217176



 Score = 42.1 bits (21), Expect = 0.70
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 104    aaaaggtcttatatttaagaacggatgga 132
              ||||||||||||||||  |||||||||||
Sbjct: 142822 aaaaggtcttatattttggaacggatgga 142850



 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 104  aaaaggtcttatatttaagaacgga 128
            ||||||||||||||||| |||||||
Sbjct: 1723 aaaaggtcttatatttaggaacgga 1747
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>emb|BX322538.9| Zebrafish DNA sequence from clone CH211-245G11 in linkage group 15,
             complete sequence
          Length = 159879

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    tcttaaaaaggtcttatattt 119
             |||||||||||||||||||||
Sbjct: 75568 tcttaaaaaggtcttatattt 75548
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>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1
           gene, complete cds
          Length = 4098

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 104 aaaaggtcttatatttaagaacgga 128
           ||||||||||||||||| |||||||
Sbjct: 734 aaaaggtcttatatttaggaacgga 710
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>gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence
          Length = 69947

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 113   tatatttaagaacggatggaatata 137
             ||||||||||| |||||||||||||
Sbjct: 53095 tatatttaagaccggatggaatata 53071
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 104   aaaaggtcttatatttaagaacgga 128
             ||||||||||||||||| |||||||
Sbjct: 66736 aaaaggtcttatatttaggaacgga 66760



 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 104   aaaaggtcttatatttaagaacgga 128
             ||||||||||||||||| |||||||
Sbjct: 66637 aaaaggtcttatatttaggaacgga 66613
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>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OSJNBb0058B20 from chromosome 10, complete sequence
          Length = 156232

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 113   tatatttaagaacggatggaatata 137
             ||||||| |||||||||||||||||
Sbjct: 57164 tatattttagaacggatggaatata 57140
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 113      tatatttaagaacggatggaatata 137
                ||||||| |||||||||||||||||
Sbjct: 12863686 tatattttagaacggatggaatata 12863710
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 104      aaaaggtcttatatttaagaacggatggaatat 136
                |||| |||||||||||| ||||||| |||||||
Sbjct: 29946851 aaaatgtcttatatttaggaacggagggaatat 29946819



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 111     cttatatttaagaacggatggaatataa 138
               ||||||||| ||||| ||||||||||||
Sbjct: 6884991 cttatattttagaaccgatggaatataa 6884964
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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480C01
          Length = 151100

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 104   aaaaggtcttatatttaagaacggatggaatat 136
             |||| |||||||||||| ||||||| |||||||
Sbjct: 91409 aaaatgtcttatatttaggaacggagggaatat 91377
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>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041)
            gene, complete cds
          Length = 8735

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 104  aaaaggtcttatatttaagaacgga 128
            ||||||||||||||||| |||||||
Sbjct: 5771 aaaaggtcttatatttaggaacgga 5795
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>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene,
            complete cds
          Length = 25080

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 104  aaaaggtcttatatttaagaacgga 128
            ||||||||||||||||| |||||||
Sbjct: 5397 aaaaggtcttatatttaggaacgga 5373
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>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE
          Length = 120939

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 111   cttatatttaagaacggatggaata 135
             ||||||||||| |||||||||||||
Sbjct: 83247 cttatatttaaaaacggatggaata 83271
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 113      tatatttaagaacggatggaatata 137
                ||||||| |||||||||||||||||
Sbjct: 12871026 tatattttagaacggatggaatata 12871050
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>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a,
             complete sequence
          Length = 77969

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 107   aggtcttatatttaagaacggatggaatataataaag 143
             |||||||||||||| ||||||| ||| || |||||||
Sbjct: 40538 aggtcttatatttaggaacggagggagtacaataaag 40502
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>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 111  cttatatttaagaacggatggaatataa 138
            |||||||||| ||||||||||| |||||
Sbjct: 4757 cttatatttaggaacggatggagtataa 4730
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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   atatttaagaacggatggaatata 137
             ||||||||||||||||||| ||||
Sbjct: 61340 atatttaagaacggatggagtata 61317
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>gb|AC112260.6| Mus musculus BAC clone RP23-185L5 from chromosome 18, complete sequence
          Length = 216325

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    gaaggaggaggcttaaaaaa 72
             ||||||||||||||||||||
Sbjct: 84218 gaaggaggaggcttaaaaaa 84237
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>gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosome 18, complete sequence
          Length = 149264

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     ataggcagcttatgagaaaatcta 51
              |||| |||||||||||||||||||
Sbjct: 132395 atagacagcttatgagaaaatcta 132418
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>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence
          Length = 120527

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 103    aaaaaggtcttatatttaagaacggatggaatataa 138
              ||||||||||||||| || ||||| ||||| |||||
Sbjct: 107406 aaaaaggtcttatatataggaacgaatggagtataa 107441
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>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence
          Length = 128493

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 101   ttaaaaaggtcttatatttaagaacgga 128
             |||||||||||||||| ||||| |||||
Sbjct: 45534 ttaaaaaggtcttataattaaggacgga 45561
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                 
Query: 96    gaatcttaaaaaggtcttatatttaagaacggatgg 131
             |||||||||||| || |||||||| |||||||||||
Sbjct: 68478 gaatcttaaaaatgt-ttatattttagaacggatgg 68444
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>gb|AC067844.6| Homo sapiens chromosome 8, clone RP11-234A3, complete sequence
          Length = 160099

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    atgagaaaatctaggaaggaggag 62
             |||||||||||||||||| |||||
Sbjct: 62445 atgagaaaatctaggaagcaggag 62422
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                    
Query: 96       gaatcttaaaaaggtcttatatttaagaacggatgg 131
                |||||||||||| || |||||||| |||||||||||
Sbjct: 29987781 gaatcttaaaaatgt-ttatattttagaacggatgg 29987747
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 114      atatttaagaacggatggaatata 137
                ||||||||||||||||||| ||||
Sbjct: 28907047 atatttaagaacggatggagtata 28907024
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>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0492F05
          Length = 159242

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 111   cttatatttaagaacggatggaatataa 138
             ||||||||| ||||| ||||||||||||
Sbjct: 52715 cttatattttagaaccgatggaatataa 52688
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>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0443E07
          Length = 159440

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 111  cttatatttaagaacggatggaatataa 138
            ||||||||| ||||| ||||||||||||
Sbjct: 6809 cttatattttagaaccgatggaatataa 6782
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>gb|AC107209.4| Homo sapiens BAC clone RP11-4F12 from 2, complete sequence
          Length = 113078

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   gatggaatataataaagacc 146
             ||||||||||||||||||||
Sbjct: 10820 gatggaatataataaagacc 10801
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0541C02
          Length = 150660

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                 
Query: 96    gaatcttaaaaaggtcttatatttaagaacggatgg 131
             |||||||||||| || |||||||| |||||||||||
Sbjct: 63929 gaatcttaaaaatgt-ttatattttagaacggatgg 63895
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>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence
          Length = 100208

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 103   aaaaaggtcttatatttaagaacggatggaatataa 138
             ||||||||||||||| || ||||| ||||| |||||
Sbjct: 46071 aaaaaggtcttatatataggaacgaatggagtataa 46036
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>gb|U15057.1|HIU15057 Haemophilus influenzae SB32 transferrin binding protein 2 (tbp2)
           gene, complete cds
          Length = 1955

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 gatggaatataataaagacc 146
           ||||||||||||||||||||
Sbjct: 428 gatggaatataataaagacc 409
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>gb|AC148983.2| Mus musculus BAC clone RP23-189G7 from 18, complete sequence
          Length = 212564

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    gaaggaggaggcttaaaaaa 72
             ||||||||||||||||||||
Sbjct: 74161 gaaggaggaggcttaaaaaa 74142
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>emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2-35p14, COMPLETE SEQUENCE
          Length = 120436

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 110   tcttatatttaagaacggatggaatata 137
             ||||||||||| ||||||||| ||||||
Sbjct: 31512 tcttatatttaggaacggatgtaatata 31539
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>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139,
             complete sequence
          Length = 106089

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   gtcttatatttaagaacggatgga 132
             |||||||||||| |||||||||||
Sbjct: 12452 gtcttatatttaggaacggatgga 12429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,660,879
Number of Sequences: 3902068
Number of extensions: 2660879
Number of successful extensions: 178830
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 178324
Number of HSP's gapped (non-prelim): 509
length of query: 217
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 195
effective length of database: 17,147,199,772
effective search space: 3343703955540
effective search space used: 3343703955540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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