ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart21d06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 240 bits (121), Expect = 4e-60 Identities = 148/157 (94%) Strand = Plus / Minus Query: 346 ctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatc 405 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1087 ctcagcttctgttcttgcatttctccattgccctcggtgcaaggccaatagcttctgatc 1028 Query: 406 ctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccga 465 |||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||| |||| Sbjct: 1027 ctttcattatcctaaggcgcttgcatgattcaacaaacatctcccatgggacgtcgccga 968 Query: 466 cgagcatccagtcgccgtccttgtcctcgtacgttgg 502 ||||||||||||||||||||||||||||||| ||||| Sbjct: 967 cgagcatccagtcgccgtccttgtcctcgtaggttgg 931 Score = 42.1 bits (21), Expect = 1.8 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Minus Query: 142 acatgttcttggcttcttctttcttatgtatataacaagatga 184 |||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1339 acatgttcttggcttctt---tcttatgtataagacaagatga 1300 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 agggtgcctttgcattttgtgcca 35 ||||||||||| |||||||||||| Sbjct: 1442 agggtgcctttacattttgtgcca 1419
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 345 cctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgat 404 |||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 998 cctcagcttctgttcttgcatttctccatggcccttggtgccaggccaatggcttctgat 939 Query: 405 cctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccg 464 |||||||| |||||||||||||||||||| || ||||||||||||||||| || || ||| Sbjct: 938 cctttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacggcacatcgccg 879 Query: 465 acgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcgga 514 |||||||||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 878 acgagcatccagtccccgtccttgtcctcgtaggtcggcacgtactcgga 829 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 agggtgcctttgcattttgtgcca 35 ||||||||||||||| |||||||| Sbjct: 1356 agggtgcctttgcatcttgtgcca 1333
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 218 bits (110), Expect = 1e-53 Identities = 155/170 (91%) Strand = Plus / Minus Query: 345 cctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgat 404 |||||||| |||||||||||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 571 cctcagcttctgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgat 512 Query: 405 cctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccg 464 |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 511 cctttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacggcacgtcgccg 452 Query: 465 acgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcgga 514 ||||||||||||||||| |||||||||||||| || || ||||||||||| Sbjct: 451 acgagcatccagtcgccctccttgtcctcgtaggtcggcacgtactcgga 402 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 12 agggtgcctttgcattttgtgcca 35 |||||||||||||||||||||||| Sbjct: 911 agggtgcctttgcattttgtgcca 888 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 224 ccaaaatgacttcactgatcaggagata 251 |||||||||||||| ||||||||||||| Sbjct: 715 ccaaaatgacttcattgatcaggagata 688
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 194 bits (98), Expect = 2e-46 Identities = 140/154 (90%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||||||||||| |||||||||||||||||||| ||||| || |||||||| || | Sbjct: 702 tcttgcatttctccactgcccttggtgcaaggccaatggcttcagaccctttcatgattc 643 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | ||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 642 ggaggcgtttgcacgactcgacgaacatctcccacgggacgtcgccgacgagcatccagt 583 Query: 478 cgccgtccttgtcctcgtacgttggaacgtactc 511 |||||||||||||||||||||| || |||||||| Sbjct: 582 cgccgtccttgtcctcgtacgtcggcacgtactc 549
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctt 408 |||| ||| |||||||||||||||| ||||| |||||||| ||||| || || | ||||| Sbjct: 835 agcttctgctcttgcatttctccatggccctgggtgcaagtccaatggcctcagttcctt 776 Query: 409 tcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacga 468 ||||||| || |||||||||||||| |||| ||||||||||| |||||||| || || | Sbjct: 775 tcattatgcgcaggcgcttgcatgatccaacaaacatctcccatgggacgtcaccaacaa 716 Query: 469 gcatccagtcgccgtccttgtcctcgtacgttggaac 505 |||||||||| || ||||| || || || |||||||| Sbjct: 715 gcatccagtcaccatccttatcttcataagttggaac 679
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 |||||||||||||||| || ||||||||||| |||| |||||| |||||||||||||| | Sbjct: 1027 tcttgcatttctccattgctcttggtgcaagtccaacagcttcagatcctttcattatgc 968 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | ||||||||||||| ||||| ||||||||||| || || || || || |||||||| | Sbjct: 967 gcgggcgcttgcatgaatcaacaaacatctcccatggaacatcacccacaagcatccaat 908 Query: 478 cgccgtccttgtc 490 |||| |||||||| Sbjct: 907 cgccatccttgtc 895
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 423 cgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccg 482 |||||||| ||||| |||||||||| ||| |||||||| ||||||||||||||||||||| Sbjct: 641 cgcttgcaggactcgacgaacatcttccaggggacgtcgccgacgagcatccagtcgccg 582 Query: 483 tccttgtcctcgtacgttggaacgtactcgg 513 |||||||||||||| || || |||||||||| Sbjct: 581 tccttgtcctcgtaggtgggcacgtactcgg 551
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaac 505 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 5741 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 5682 Query: 506 gtactc 511 |||||| Sbjct: 5681 gtactc 5676 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgc 385 ||||||||||||||| ||||||||||| Sbjct: 6366 tcttgcatttctccactgcccttggtgc 6339
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaac 505 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 24085715 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 24085774 Query: 506 gtactc 511 |||||| Sbjct: 24085775 gtactc 24085780 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcct 492 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 24100814 gggacgtcgccgacgagcatgaggtcgccgtccttgtcct 24100775 Score = 40.1 bits (20), Expect = 7.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||| || ||||| ||| ||||||| |||||||||||||||||| Sbjct: 32942713 ctcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctc 32942760 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 tcttgcatttctccatcgcccttggtgc 385 ||||||||||||||| ||||||||||| Sbjct: 24085090 tcttgcatttctccactgcccttggtgc 24085117
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaac 505 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 136841 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 136782 Query: 506 gtactc 511 |||||| Sbjct: 136781 gtactc 136776 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Plus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcct 492 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 123018 gggacgtcgccgacgagcatgaggtcgccgtccttgtcct 123057 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgc 385 ||||||||||||||| ||||||||||| Sbjct: 137466 tcttgcatttctccactgcccttggtgc 137439
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaac 505 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 24003184 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcac 24003243 Query: 506 gtactc 511 |||||| Sbjct: 24003244 gtactc 24003249 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcct 492 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 24017101 gggacgtcgccgacgagcatgaggtcgccgtccttgtcct 24017062 Score = 40.1 bits (20), Expect = 7.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||| || ||||| ||| ||||||| |||||||||||||||||| Sbjct: 33033223 ctcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctc 33033270 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 tcttgcatttctccatcgcccttggtgc 385 ||||||||||||||| ||||||||||| Sbjct: 24002559 tcttgcatttctccactgcccttggtgc 24002586
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 107 bits (54), Expect = 4e-20 Identities = 126/150 (84%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 |||||| ||||||||||||||||||| || |||||||| || ||||| || |||||||| Sbjct: 741 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaattgcctctgatcc 682 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||||||||| | ||| |||||||| ||||| ||||||||||| || || || || || Sbjct: 681 tttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaac 622 Query: 467 gagcatccagtcgccgtccttgtcctcgta 496 ||||||||||| || || ||||| ||||| Sbjct: 621 aagcatccagtctccatctttgtcttcgta 592
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 107 bits (54), Expect = 4e-20 Identities = 126/150 (84%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 |||||| ||||||||||||||||||| || |||||||| || ||||| || || ||||| Sbjct: 783 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaatggcctcagatcc 724 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||||||||| | ||| |||||||| ||||| ||||||||||| || || || || || Sbjct: 723 tttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaac 664 Query: 467 gagcatccagtcgccgtccttgtcctcgta 496 ||||||||||| || |||||||| ||||| Sbjct: 663 aagcatccagtctccatccttgtcttcgta 634
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 399 tctgatcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacg 458 ||||| |||||||| | |||||||||| ||| | || |||||||||| ||| |||||| Sbjct: 691 tctgaacctttcatcagacgaaggcgctggcaggtttccacgaacatcttccaggggacg 632 Query: 459 tccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactc 511 || |||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 631 tcgccgacgagcatccagtcgccatccttgtcctcgtacgtgggtacgtactc 579
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgtt 500 ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 586 Query: 501 ggaacgtactc 511 || |||||||| Sbjct: 585 ggcacgtactc 575
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgtt 500 ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 586 Query: 501 ggaacgtactc 511 || |||||||| Sbjct: 585 ggcacgtactc 575
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgtt 500 ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 647 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 588 Query: 501 ggaacgtactc 511 || |||||||| Sbjct: 587 ggcacgtactc 577
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgtt 500 ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 637 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 578 Query: 501 ggaacgtactc 511 || |||||||| Sbjct: 577 ggcacgtactc 567
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgtt 500 ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtc 586 Query: 501 ggaacgtactc 511 || |||||||| Sbjct: 585 ggcacgtactc 575
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 99.6 bits (50), Expect = 9e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||| | |||||||| || ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 776 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 717 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || ||||||||||| || |||||| ||| ||||| || || ||||||||| Sbjct: 716 atgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatc 657 Query: 474 cagtcgccgtccttgtcctcgtacgttggaacgtactc 511 ||||| || || ||||||||||| ||||||| ||||| Sbjct: 656 cagtcaccatctttgtcctcgtagcttggaacatactc 619
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 99.6 bits (50), Expect = 9e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||| | |||||||| || ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 680 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 621 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || ||||||||||| || |||||| ||| ||||| || || ||||||||| Sbjct: 620 atgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatc 561 Query: 474 cagtcgccgtccttgtcctcgtacgttggaacgtactc 511 ||||| || || ||||||||||| ||||||| ||||| Sbjct: 560 cagtcaccatctttgtcctcgtagcttggaacatactc 523
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 99.6 bits (50), Expect = 9e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 385 caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 444 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| Sbjct: 25345133 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 25345192 Query: 445 tc 446 || Sbjct: 25345193 tc 25345194 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttgg 502 |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25345350 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggttgg 25345406 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 25359886 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgta 25359843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 346 ctcagctcctgttcttgcatttctccatcgcccttggtgc 385 ||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 25344953 ctcagcttctgttcttgcatttctccattgccctcggtgc 25344992 Score = 42.1 bits (21), Expect = 1.8 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctttcttatgtatataacaagatga 184 |||||||||||||||||| ||||||||||| ||||||||| Sbjct: 25344701 acatgttcttggcttctt---tcttatgtataagacaagatga 25344740 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 agggtgcctttgcattttgtgcca 35 ||||||||||| |||||||||||| Sbjct: 25344597 agggtgcctttacattttgtgcca 25344620
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 99.6 bits (50), Expect = 9e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||| | |||||||| || ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 488 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 429 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || ||||||||||| || |||||| ||| ||||| || || ||||||||| Sbjct: 428 atgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatc 369 Query: 474 cagtcgccgtccttgtcctcgtacgttggaacgtactc 511 ||||| || || ||||||||||| ||||||| ||||| Sbjct: 368 cagtcaccatctttgtcctcgtagcttggaacatactc 331
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 99.6 bits (50), Expect = 9e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 385 caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 444 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| Sbjct: 25273309 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 25273368 Query: 445 tc 446 || Sbjct: 25273369 tc 25273370 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttgg 502 |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25273526 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggttgg 25273582 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 25288062 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgta 25288019 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 346 ctcagctcctgttcttgcatttctccatcgcccttggtgc 385 ||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 25273129 ctcagcttctgttcttgcatttctccattgccctcggtgc 25273168 Score = 42.1 bits (21), Expect = 1.8 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctttcttatgtatataacaagatga 184 |||||||||||||||||| ||||||||||| ||||||||| Sbjct: 25272877 acatgttcttggcttctt---tcttatgtataagacaagatga 25272916 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 agggtgcctttgcattttgtgcca 35 ||||||||||| |||||||||||| Sbjct: 25272773 agggtgcctttacattttgtgcca 25272796
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 99.6 bits (50), Expect = 9e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 385 caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 444 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| Sbjct: 11943 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 12002 Query: 445 tc 446 || Sbjct: 12003 tc 12004 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttgg 502 |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12160 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggttgg 12216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 26696 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgta 26653 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 346 ctcagctcctgttcttgcatttctccatcgcccttggtgc 385 ||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 11763 ctcagcttctgttcttgcatttctccattgccctcggtgc 11802 Score = 42.1 bits (21), Expect = 1.8 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctttcttatgtatataacaagatga 184 |||||||||||||||||| ||||||||||| ||||||||| Sbjct: 11511 acatgttcttggcttctt---tcttatgtataagacaagatga 11550 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 agggtgcctttgcattttgtgcca 35 ||||||||||| |||||||||||| Sbjct: 11407 agggtgcctttacattttgtgcca 11430
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 135044 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactcg 135103
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 4624577 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactcg 4624636
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 680 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactcg 621
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 677 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactcg 618
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 346 ctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatc 405 ||||||| || ||||||||||||||||| |||||||||||||| ||||| || ||| || Sbjct: 825 ctcagcttctattcttgcatttctccatagcccttggtgcaagtccaatggcctcttttc 766 Query: 406 ctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccga 465 ||||||| || || || || ||||| || ||||| |||||||||||||| || || || | Sbjct: 765 ctttcatgatacgtagacgtttgcaagattcaacaaacatctcccacggaacatctccaa 706 Query: 466 cgagcatccagtcgccgtccttgtcctcgtacgttggaac 505 | |||||||| || || || ||||| || || |||||||| Sbjct: 705 caagcatccaatcaccatctttgtcttcataagttggaac 666
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactc 511 |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 4074630 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactc 4074688 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtcct 486 |||||| ||||||||||| || | ||||||||| ||||||| Sbjct: 10312454 ctcccatgggacgtccccaaccatcatccagtccccgtcct 10312414 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 456 acgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||| ||||||||||||| |||||| || | ||||||||| Sbjct: 4817241 acgtcgccgacgagcatccggtcgccctcgtcgtcctcgta 4817201
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactc 511 |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 41373 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactc 41431
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactc 511 |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 21601 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtacgtcggcacgtactc 21659
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||| | |||||||| || ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 769 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 710 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || | | || ||||||||||| || |||||| ||| ||||| || || ||||||||| Sbjct: 709 atgcccaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatc 650 Query: 474 cagtcgccgtccttgtcctcgtacgttggaacgtactc 511 ||||| || || ||||||||||| ||||||| ||||| Sbjct: 649 cagtcaccatctttgtcctcgtagcttggaacatactc 612
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 23119015 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtgggcacgtactcg 23118956 Query: 513 g 513 | Sbjct: 23118955 g 23118955
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 69663 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtgggcacgtactcg 69604 Query: 513 g 513 | Sbjct: 69603 g 69603
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactcg 512 |||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 610 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggtgggcacgtactcg 551 Query: 513 g 513 | Sbjct: 550 g 550
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 891 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 832 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 831 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 772 Query: 474 cagtcgcc 481 |||||||| Sbjct: 771 cagtcgcc 764
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 704 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 645 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 644 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 585 Query: 474 cagtcgcc 481 |||||||| Sbjct: 584 cagtcgcc 577
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 887 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 828 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 827 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 768 Query: 474 cagtcgcc 481 |||||||| Sbjct: 767 cagtcgcc 760
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 244 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 185 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 184 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 125 Query: 474 cagtcgcc 481 |||||||| Sbjct: 124 cagtcgcc 117
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 704 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 645 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 644 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 585 Query: 474 cagtcgcc 481 |||||||| Sbjct: 584 cagtcgcc 577
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 846 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 787 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 786 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 727 Query: 474 cagtcgcc 481 |||||||| Sbjct: 726 cagtcgcc 719
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 875 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 816 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 815 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 756 Query: 474 cagtcgcc 481 |||||||| Sbjct: 755 cagtcgcc 748
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 891 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 832 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 831 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 772 Query: 474 cagtcgcc 481 |||||||| Sbjct: 771 cagtcgcc 764
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 404 tcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtcccc 463 |||||||||||| || || ||||||||||| ||||| ||||| ||||| ||||| || || Sbjct: 705 tcctttcattattcgcagccgcttgcatgattcaacaaacatgtcccatgggacatcacc 646 Query: 464 gacgagcatccagtcgccgtcctt 487 ||||||||||||||| |||||||| Sbjct: 645 gacgagcatccagtcaccgtcctt 622
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| || || | |||||||| ||||| || || ||||||||||| |||||| Sbjct: 870 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 811 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 || || | || |||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 810 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtctcctacaagcatc 751 Query: 474 cagtcgcc 481 |||||||| Sbjct: 750 cagtcgcc 743
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 81.8 bits (41), Expect = 2e-12 Identities = 130/160 (81%), Gaps = 6/160 (3%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa------tagcttctg 402 ||||||||||||||||||| |||| || ||||||||||| |||| |||| || Sbjct: 391 agctcctgttcttgcattttgccatggctcttggtgcaagaccaagaccaatagcctcct 332 Query: 403 atcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccc 462 ||||||||| || || | ||||||||||| ||||| ||||||||||| ||||| || | Sbjct: 331 ttcctttcatgatgcgtaaacgcttgcatgattcaacaaacatctcccatgggacatcac 272 Query: 463 cgacgagcatccagtcgccgtccttgtcctcgtacgttgg 502 |||| ||||||||||| || ||||||||||| || ||||| Sbjct: 271 cgacaagcatccagtcaccatccttgtcctcataggttgg 232
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 81.8 bits (41), Expect = 2e-12 Identities = 130/160 (81%), Gaps = 6/160 (3%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa------tagcttctg 402 ||||||||||||||||||| |||| || ||||||||||| |||| |||| || Sbjct: 1241 agctcctgttcttgcattttgccatggctcttggtgcaagaccaagaccaatagcctcct 1182 Query: 403 atcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccc 462 ||||||||| || || | ||||||||||| ||||| ||||||||||| ||||| || | Sbjct: 1181 ttcctttcatgatgcgtaaacgcttgcatgattcaacaaacatctcccatgggacatcac 1122 Query: 463 cgacgagcatccagtcgccgtccttgtcctcgtacgttgg 502 |||| ||||||||||| || ||||||||||| || ||||| Sbjct: 1121 cgacaagcatccagtcaccatccttgtcctcataggttgg 1082
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || || Sbjct: 811 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 752 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||| |||| | ||| ||||||||||| || ||||||| ||||||||| || || || Sbjct: 751 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 692 Query: 467 gagcatccagtcgccgtccttgtc 490 ||||||||||| || |||||||| Sbjct: 691 aagcatccagtcaccatccttgtc 668
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 79.8 bits (40), Expect = 8e-12 Identities = 121/148 (81%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctt 408 ||||| |||||||| | || ||| | |||||||||||||| || || ||||| || || | Sbjct: 776 agctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggacccct 717 Query: 409 tcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacga 468 |||| |||| | ||| |||||||| |||| ||||||||||| |||||||| || || | Sbjct: 716 tcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaa 657 Query: 469 gcatccagtcgccgtccttgtcctcgta 496 |||||||||| || |||||||| ||||| Sbjct: 656 gcatccagtctccatccttgtcttcgta 629
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || || Sbjct: 863 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 804 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||| |||| | ||| ||||||||||| || ||||||| ||||||||| || || || Sbjct: 803 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 744 Query: 467 gagcatccagtcgccgtccttgtc 490 ||||||||||| || |||||||| Sbjct: 743 aagcatccagtcaccatccttgtc 720
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || || Sbjct: 873 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 814 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||| |||| | ||| ||||||||||| || ||||||| ||||||||| || || || Sbjct: 813 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 754 Query: 467 gagcatccagtcgccgtccttgtc 490 ||||||||||| || |||||||| Sbjct: 753 aagcatccagtcaccatccttgtc 730
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || || Sbjct: 868 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 809 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||| |||| | ||| ||||||||||| || ||||||| ||||||||| || || || Sbjct: 808 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 749 Query: 467 gagcatccagtcgccgtccttgtc 490 ||||||||||| || |||||||| Sbjct: 748 aagcatccagtcaccatccttgtc 725
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 363 catttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatccgaagg 422 ||||||||||| || | |||||||| || | ||||||| ||||||||| || |||||| Sbjct: 731 catttctccatggctcgaggtgcaagtccctttgcttctgttcctttcataatacgaagg 672 Query: 423 cgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccg 482 ||||| ||||| ||||| |||||| |||| || || || ||||| |||||||| || || Sbjct: 671 cgcttacatgattcaacaaacatcccccaaggaacatcaccgacaagcatccaatctcca 612 Query: 483 tccttgtc 490 |||||||| Sbjct: 611 tccttgtc 604
>dbj|AK111128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C09, full insert sequence Length = 956 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 438 acgaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtac 497 |||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 418 acgaacatctcccagggcacgtcgccgacgagcatccagtcgccgtcgccgtcctcgtac 359
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 347 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 406 ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || || Sbjct: 136 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 77 Query: 407 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgac 466 ||||| |||| | ||| ||||||||||| || ||||||| ||||||||| || || || Sbjct: 76 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 17 Query: 467 gagcatccagtc 478 ||||||||||| Sbjct: 16 aagcatccagtc 5
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 369 tccatcgcccttggtgcaaggccaatagcttctgatcctttcattatccgaaggcgcttg 428 ||||| |||||||| || || ||||| || ||||| |||||||| |||| || | |||| Sbjct: 1294 tccatagcccttggggctagaccaatggcatctgaacctttcatgatcctcagcctcttg 1235 Query: 429 catgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttg 488 || | |||| ||||||||||| ||||| || ||||| ||||||||||| || ||||| Sbjct: 1234 caggtatcaataaacatctcccaggggacatcaccgactagcatccagtccccatcctta 1175 Query: 489 tcctcgtacgt 499 ||||||||||| Sbjct: 1174 tcctcgtacgt 1164
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 385 caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 444 |||| ||||| |||||||||||||||||||| || ||||| ||||||||| |||| |||| Sbjct: 23388 caagaccaattgcttctgatcctttcattattcgcaggcgtttgcatgacccaacaaaca 23329 Query: 445 tc 446 || Sbjct: 23328 tc 23327 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 346 ctcagctcctgttcttgcatttctccatcgcccttggtgc 385 ||||||| ||||| |||||||||||||| || |||||||| Sbjct: 23559 ctcagcttctgtttttgcatttctccatggctcttggtgc 23520
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtc 484 |||||| || |||| |||||||||||| ||||| || || || |||||||||||||| || Sbjct: 84 cttgcaagaatcaatgaacatctcccaggggacatctccaacaagcatccagtcgccatc 25 Query: 485 cttgtcctc 493 ||||||||| Sbjct: 24 cttgtcctc 16
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 393 atagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccac 452 |||||||||||||| |||||||| ||||| || ||||| || | |||||||||||||| Sbjct: 101 atagcttctgatcccttcattatacgaagacgtttgcacgagttcacgaacatctcccaa 42 Query: 453 gggacgtccccgacgagcatccagtcgccgtc 484 || ||||| || || |||||||| || ||||| Sbjct: 41 ggaacgtcgccaacaagcatccaatctccgtc 10
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 366 ttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatccgaaggcgc 425 |||||||| || || || ||||| ||||| ||||| ||||| ||||| || || | || Sbjct: 767 ttctccattgctctcggagcaagtccaattgcttcagatcccttcataatgcgcaaacgt 708 Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 707 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 648 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 647 ttgtcctcgta 637
>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds Length = 291 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| |||||||| || ||||| ||||| ||| ||| ||| ||||||||| Sbjct: 287 ctgttcttgcacttctccatggctcttggagcaagtccagcagcctcttttcctttcatg 228 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctccca 451 || ||||| | ||||||||||| || ||||||||||| Sbjct: 227 atgcgaagccttttgcatgactccacaaacatctccca 190
>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds Length = 990 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| |||||||| || ||||| ||||| ||| ||| ||| ||||||||| Sbjct: 578 ctgttcttgcacttctccatggctcttggagcaagtccagcagcctcttttcctttcatg 519 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctccca 451 || ||||| | ||||||||||| || ||||||||||| Sbjct: 518 atgcgaagccttttgcatgactccacaaacatctccca 481
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 60.0 bits (30), Expect = 8e-06 Identities = 114/142 (80%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttca 411 ||||||| |||||||||||||| |||||||| || |||||||| || || || | |||| Sbjct: 1280 tcctgtttttgcatttctccatggcccttggggctaggccaatggcatcagagctcttca 1221 Query: 412 ttatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagca 471 | |||| || | |||||||| |||| ||||||||||| || || || || || |||| Sbjct: 1220 tgatcctcagcctcttgcatgtttcaataaacatctcccagggaacatcgccaacaagca 1161 Query: 472 tccagtcgccgtccttgtcctc 493 ||||||| ||||| || ||||| Sbjct: 1160 tccagtctccgtctttatcctc 1139
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 439 cgaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 734 cgaacatctcgaacggcacgtctccgacgagcatgaggtcgccgtccttgtcctcgta 677
>ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); transcription factor AT1G04250 (AXR3) mRNA, complete cds Length = 1057 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 803 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 744 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 743 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 684 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 683 caccgtctttgtc 671
>gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 690 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 679 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 620 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 619 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 560 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 559 caccgtctttgtc 547
>gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 721 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 679 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 620 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 619 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 560 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 559 caccgtctttgtc 547
>gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 1033 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 761 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 702 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 701 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 642 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 641 caccgtctttgtc 629
>dbj|AK221076.1| Arabidopsis thaliana mRNA for putative auxin-induced protein, IAA17/AXR3-1, complete cds, clone: RAFL22-79-F09 Length = 452 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 206 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 147 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 146 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 87 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 86 caccgtctttgtc 74
>gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete sequence Length = 1021 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 803 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 744 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 743 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 684 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 683 caccgtctttgtc 671
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||||| | |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 647 gaacatctcgaatgggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgta 591
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||| || ||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 642 gaacatctcccatggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcgta 586
>gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (IAA17) mRNA, complete cds Length = 971 Score = 58.0 bits (29), Expect = 3e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 358 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 417 ||||||| |||||||||||||| || || || ||||| || || ||||||||||| | | Sbjct: 740 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatgagac 681 Query: 418 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagt 477 | | |||||||||| || |||||||| ||| || ||||| |||||||||||||| | Sbjct: 680 gtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatccaat 621 Query: 478 cgccgtccttgtc 490 | ||||| ||||| Sbjct: 620 caccgtctttgtc 608
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Minus Query: 356 gttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattat 415 ||||||| ||||||||| ||||| || || || |||||||| || ||||||||||| || Sbjct: 909 gttcttggatttctccacagccctgggagctagtccaatagcatcggatcctttcataat 850 Query: 416 ccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatcca 475 || | ||||||||| ||| ||||||||||| || || ||||| || |||||||| Sbjct: 849 tttgagcctcttgcatgaagcaataaacatctcccaaggaacatccccaacaagcatcca 790 Query: 476 gtcgccgtccttgtcctcgtacgt 499 ||| || ||||| ||||| ||||| Sbjct: 789 gtctccatccttatcctcatacgt 766
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtac 497 |||||| || ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 20341144 ctcccagggcacgtcgccgacgagcatccagtcgccgtcgccgtcctcgtac 20341195
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtac 497 |||||| || ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 120271 ctcccagggcacgtcgccgacgagcatccagtcgccgtcgccgtcctcgtac 120322
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 707 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 648 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 647 ttgtcctcgta 637
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 650 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 591 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 590 ttgtcctcgta 580
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 650 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 591 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 590 ttgtcctcgta 580
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 705 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 646 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 645 ttgtcctcgta 635
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 650 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 591 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 590 ttgtcctcgta 580
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 648 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 589 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 588 ttgtcctcgta 578
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtc 484 |||||||||||||| ||||||||||| ||||| || || || |||||||| || || || Sbjct: 394 cttgcatgactcaataaacatctcccaagggacatctccaaccagcatccaatcaccatc 335 Query: 485 cttgtcctcgtacgttggaacgt 507 |||||||| || ||||||||| Sbjct: 334 tttgtcctcataaattggaacgt 312
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 672 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 613 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 612 ttgtcctcgta 602
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtc 478 ||||||||||||| ||||||||||| |||||||| || || ||||||||||| Sbjct: 162 cttgcatgactcagtaaacatctcccaagggacgtctcccactagcatccagtc 109
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 354 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 413 ||||||||||| ||||||| || ||||| || || ||||| || || || |||||||| Sbjct: 875 ctgttcttgcacttctccacagctcttggggcgagtccaatggcctcagaccctttcatg 816 Query: 414 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatc 473 |||| | |||||||||||| ||||| ||||| |||| || || || || || |||||| Sbjct: 815 atcctcaagcgcttgcatgaatcaacaaacattccccatggaacatctcctacaagcatc 756 Query: 474 cagtcgccgtccttgtcctcgtacgttggaacgtactc 511 || || || |||||||| || || ||||| || ||||| Sbjct: 755 caatctccatccttgtcttcataagttggcacatactc 718
>ref|NM_189655.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 717 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||| ||| || ||||| ||||||||||||| |||||| || | ||||||||| Sbjct: 612 gaacatctgccagggaacgtcgccgacgagcatccggtcgccctcgtcgtcctcgta 556
>gb|DQ191056.1| Glycine max clone DD8.1 SP-6 mRNA, complete cds Length = 402 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 393 ||||||||||||||||||| |||| || ||||||||||| |||| Sbjct: 310 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 266
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 50.1 bits (25), Expect = 0.007 Identities = 118/149 (79%) Strand = Plus / Minus Query: 369 tccatcgcccttggtgcaaggccaatagcttctgatcctttcattatccgaaggcgcttg 428 ||||| |||||||| || |||||||| || ||||| |||||||| |||| | | |||| Sbjct: 1228 tccatagcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttg 1169 Query: 429 catgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttg 488 || | |||| ||||||||||| || || || ||||| ||||||||||| || ||||| Sbjct: 1168 caagtgtcaataaacatctcccaaggtacatcaccgacaagcatccagtccccatcctta 1109 Query: 489 tcctcgtacgttggaacgtactcggatcc 517 || ||||| || |||| ||||| ||||| Sbjct: 1108 tcttcgtaagtgagaacatactcagatcc 1080
>dbj|AK100314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078N13, full insert sequence Length = 1795 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||| ||| || ||||| ||||||||||||| |||||| || | ||||||||| Sbjct: 1244 gaacatctgccagggaacgtcgccgacgagcatccggtcgccctcgtcgtcctcgta 1188
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcct 492 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 716 gggacgtcgccgacgagcatgaggtcgccgtccttgtcct 677
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||||||| ||||| || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1191 aacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcgta 1136
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||||||| ||||| || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1190 aacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcgta 1135
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||||||| ||||| || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1191 aacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcgta 1136
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 453 gggacgtccccgacgagcatccagtcgccgtccttgtcct 492 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 718 gggacgtcgccgacgagcatgaggtcgccgtccttgtcct 679
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||| ||||| || || |||||||||||||| || || ||||||||||| Sbjct: 687 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>gb|AC115751.6| Mus musculus chromosome 1, clone RP23-16I21, complete sequence Length = 256998 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 81 agaacaagcagagcaaaaagaaa 103 ||||||||||||||||||||||| Sbjct: 171203 agaacaagcagagcaaaaagaaa 171181
>gb|AC138640.7| Mus musculus chromosome 1, clone RP23-463G19, complete sequence Length = 167384 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 81 agaacaagcagagcaaaaagaaa 103 ||||||||||||||||||||||| Sbjct: 4245 agaacaagcagagcaaaaagaaa 4223
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 465 acgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactc 511 |||||||||||||| || || ||||||||||| ||||||| ||||| Sbjct: 107028 acgagcatccagtcaccatctttgtcctcgtagcttggaacatactc 107074 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 385 caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 444 |||| ||||| ||||| |||||||||||||| || | || ||||||||||| || |||| Sbjct: 106636 caagtccaattgcttcggatcctttcattatgcgcaaacgtttgcatgactcgacaaaca 106695 Query: 445 tc 446 || Sbjct: 106696 tc 106697
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 465 acgagcatccagtcgccgtccttgtcctcgtacgttggaacgtactc 511 |||||||||||||| || || ||||||||||| ||||||| ||||| Sbjct: 52524 acgagcatccagtcaccatctttgtcctcgtagcttggaacatactc 52570 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 385 caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 444 |||| ||||| ||||| |||||||||||||| || | || ||||||||||| || |||| Sbjct: 52132 caagtccaattgcttcggatcctttcattatgcgcaaacgtttgcatgactcgacaaaca 52191 Query: 445 tc 446 || Sbjct: 52192 tc 52193
>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14, complete sequence Length = 189425 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 310 attttgattcttgcataacattt 332 ||||||||||||||||||||||| Sbjct: 13185 attttgattcttgcataacattt 13163
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 426 ttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtcc 485 ||||| ||||| || ||||| ||||| ||||| || || ||||||||||||| || || Sbjct: 951 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagttaccatct 892 Query: 486 ttgtcctcgta 496 ||||||||||| Sbjct: 891 ttgtcctcgta 881
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||| ||||| || || |||||||||||||| || || ||||||||||| Sbjct: 36825 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgta 36775
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||| || ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 642 ctcccatggtacgtcgccgacaagcatccaatctccatccttgtcctcgta 592
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtc 478 |||||||||||| ||||| || || |||||||||||||| Sbjct: 1207 gaacatctcccaagggacatcaccaacgagcatccagtc 1169
>ref|NM_185060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.45 Identities = 46/54 (85%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||| ||||| || ||||| ||| ||||||| |||||||||||||||||| Sbjct: 537 gaacatgtcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctc 484
>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence Length = 191923 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 aagcagagcaaaaagaaaagacacaa 111 |||||||| ||||||||||||||||| Sbjct: 85548 aagcagagaaaaaagaaaagacacaa 85573
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 44.1 bits (22), Expect = 0.45 Identities = 112/142 (78%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttca 411 ||||||||||||||||||||| ||||| || || || ||||| || || | | |||| Sbjct: 1075 tcctgttcttgcatttctccacagccctgggagctagaccaatggcatcacagctcttca 1016 Query: 412 ttatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtccccgacgagca 471 | |||| || |||||||||| ||||| ||||||| ||| || || || || || |||| Sbjct: 1015 tgatcctcagccgcttgcatgtctcaataaacatctgccagggcacatcacccacaagca 956 Query: 472 tccagtcgccgtccttgtcctc 493 ||||||| || ||||| ||||| Sbjct: 955 tccagtcaccatccttatcctc 934
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtc 478 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtc 702
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtc 478 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1153 aacatctcccaggggacatcaccgacaagcatccagtc 1116
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 44.1 bits (22), Expect = 0.45 Identities = 46/54 (85%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||| ||||| || ||||| ||| ||||||| |||||||||||||||||| Sbjct: 602 gaacatgtcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctc 549
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtc 478 ||||||||||| ||||| || || |||||||||||||| Sbjct: 402 aacatctcccatgggacatcacccacgagcatccagtc 365
>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds Length = 756 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 396 gcttctgatcctttcattatcc 417 |||||||||||||||||||||| Sbjct: 564 gcttctgatcctttcattatcc 543
>dbj|AB026823.1| Cucumis sativus CsIAA3 mRNA for Aux/IAA protein, complete cds Length = 540 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgtacgt 499 |||||| ||||| || || || ||||||||||||||||| || || || || || ||||| Sbjct: 489 gaacatttcccatggaacatcgccgacgagcatccagtcaccatctttatcttcatacgt 430 Query: 500 tggaac 505 |||||| Sbjct: 429 tggaac 424
>ref|NM_123385.2| Arabidopsis thaliana unknown protein AT5G40210 mRNA, complete cds Length = 1154 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gttcttggcttcttctttctt 166 ||||||||||||||||||||| Sbjct: 23 gttcttggcttcttctttctt 3
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||||||||||| || || || || ||||||||||| || ||||| ||||| Sbjct: 1190 aacatctcccacggaacatctccaacaagcatccagtcaccatccttatcctc 1138
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||||||||||| || || || || ||||||||||| || ||||| ||||| Sbjct: 1190 aacatctcccacggaacatctccaacaagcatccagtcaccatccttatcctc 1138
>ref|NM_183562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtcct 486 |||||| ||||||||||| || | ||||||||| ||||||| Sbjct: 558 ctcccatgggacgtccccaaccatcatccagtccccgtcct 518
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||| || || || || || ||||||||||| || |||||||| ||||| Sbjct: 753 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 697
>ref|XM_513609.1| PREDICTED: Pan troglodytes similar to syntaxin 4 binding protein UNC-18c (LOC457078), mRNA Length = 4194 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 agaacaagcagagcaaaaaga 101 ||||||||||||||||||||| Sbjct: 2549 agaacaagcagagcaaaaaga 2569
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 caaaaagaaaagacacaatta 114 ||||||||||||||||||||| Sbjct: 1125044 caaaaagaaaagacacaatta 1125064
>gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K5, complete sequence Length = 144951 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 caaaaagaaaagacacaatta 114 ||||||||||||||||||||| Sbjct: 93845 caaaaagaaaagacacaatta 93865
>gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20, complete sequence Length = 154694 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 caaaaagaaaagacacaatta 114 ||||||||||||||||||||| Sbjct: 40947 caaaaagaaaagacacaatta 40927
>ref|NM_001033838.1| Ciona intestinalis LIM and SH3 protein (lasp), mRNA Length = 711 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttct 369 ||||||||||||||||||||| Sbjct: 672 agctcctgttcttgcatttct 652
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctt 162 ||||||||||||||||||||| Sbjct: 105892 acatgttcttggcttcttctt 105912
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctt 162 ||||||||||||||||||||| Sbjct: 46906 acatgttcttggcttcttctt 46926
>gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, complete sequence Length = 192692 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 acttaggacagagaatatgatacag 285 |||||||||| |||||||||||||| Sbjct: 167403 acttaggacatagaatatgatacag 167379
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||||||||||| || || || || ||||||||||| || ||||| ||||| Sbjct: 1162 aacatctcccacggaacatctccaacaagcatccagtcaccatccttatcctc 1110
>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence Length = 198687 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 tcctgttcttgcatttctcca 372 ||||||||||||||||||||| Sbjct: 191268 tcctgttcttgcatttctcca 191288
>gb|AC091879.2| Homo sapiens chromosome 5 clone CTD-3136G21, complete sequence Length = 170712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctcca 372 ||||||||||||||||||||| Sbjct: 168732 tcctgttcttgcatttctcca 168712
>gb|AF412089.1|AF412089 Arabidopsis thaliana AT5g40210/MSN9_110 mRNA, complete cds Length = 1088 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gttcttggcttcttctttctt 166 ||||||||||||||||||||| Sbjct: 23 gttcttggcttcttctttctt 3
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||||||||||| || || || || ||||||||||| || ||||| ||||| Sbjct: 917 aacatctcccacggaacatctccaacaagcatccagtcaccatccttatcctc 865
>gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosome 12, complete sequence Length = 143190 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 acttaggacagagaatatgatacag 285 |||||||||| |||||||||||||| Sbjct: 32744 acttaggacatagaatatgatacag 32720
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctt 162 ||||||||||||||||||||| Sbjct: 24917778 acatgttcttggcttcttctt 24917798
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ctcacatgttcttggcttctt 159 ||||||||||||||||||||| Sbjct: 3804899 ctcacatgttcttggcttctt 3804879
>dbj|AB182287.1| Ciona intestinalis mRNA for lasp, complete cds Length = 711 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 agctcctgttcttgcatttct 369 ||||||||||||||||||||| Sbjct: 672 agctcctgttcttgcatttct 652
>gb|AC068121.8| Homo sapiens BAC clone RP11-181P21 from 2, complete sequence Length = 170846 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tttcttatgtatataacaaga 181 ||||||||||||||||||||| Sbjct: 119933 tttcttatgtatataacaaga 119953
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||||||||||| || || || || ||||||||||| || ||||| ||||| Sbjct: 1194 aacatctcccacggaacatctccaacaagcatccagtcaccatccttatcctc 1142
>gb|AY085353.1| Arabidopsis thaliana clone 147711 mRNA, complete sequence Length = 783 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 581 gaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 525
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtcct 486 |||||| ||||||||||| || | ||||||||| ||||||| Sbjct: 19174 ctcccatgggacgtccccaaccatcatccagtccccgtcct 19134
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ctcacatgttcttggcttctt 159 ||||||||||||||||||||| Sbjct: 70116 ctcacatgttcttggcttctt 70096
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 456 acgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||| ||||||||||||| |||||| || | ||||||||| Sbjct: 61890 acgtcgccgacgagcatccggtcgccctcgtcgtcctcgta 61850
>emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chromosome X, complete sequence Length = 197404 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 ctgactgactggaaaagagaa 214 ||||||||||||||||||||| Sbjct: 146717 ctgactgactggaaaagagaa 146697
>dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9 Length = 61001 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gttcttggcttcttctttctt 166 ||||||||||||||||||||| Sbjct: 28698 gttcttggcttcttctttctt 28718
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||| || || || || || ||||||||||| || |||||||| ||||| Sbjct: 737 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 681
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||| || || || || || ||||||||||| || |||||||| ||||| Sbjct: 834 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 778
>dbj|AK068232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149D08, full insert sequence Length = 3103 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcat 472 ||||| |||||| |||||||| ||||||||||| Sbjct: 2585 gaacagctcccatgggacgtcgccgacgagcat 2553
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 440 gaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||| || || || || || ||||||||||| || |||||||| ||||| Sbjct: 785 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 729
>gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, complete sequence Length = 194387 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 caagcagagcaaaaagaaaagacacaatt 113 ||||||||||| |||||||||||| |||| Sbjct: 108849 caagcagagcagaaagaaaagacagaatt 108821
>emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in linkage group 20, complete sequence Length = 137700 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 ttcttctttcttatgtatata 175 ||||||||||||||||||||| Sbjct: 18952 ttcttctttcttatgtatata 18932
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||||||||||| || || || || ||||||||||| || ||||| ||||| Sbjct: 1150 aacatctcccacggaacatctccaacaagcatccagtcaccatccttatcctc 1098
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 acatgttcttggcttcttctt 162 ||||||||||||||||||||| Sbjct: 25229448 acatgttcttggcttcttctt 25229468
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 ||||||||||| || || || || || |||||||||||||| || |||||||| Sbjct: 474 aacatctcccaaggaacatctccaaccagcatccagtcgccatctttgtcctc 422
>ref|NM_112422.2| Arabidopsis thaliana IAA19; transcription factor AT3G15540 (IAA19) mRNA, complete cds Length = 968 Score = 40.1 bits (20), Expect = 7.0 Identities = 59/72 (81%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtc 484 |||||||||||| | |||||| |||| || || || ||| ||||||||||||| || || Sbjct: 601 cttgcatgactctagaaacatcccccaaggtacatcaccggcgagcatccagtctccatc 542 Query: 485 cttgtcctcgta 496 ||||| ||||| Sbjct: 541 tttgtcttcgta 530
>ref|NM_104161.2| Arabidopsis thaliana IAA6; transcription factor AT1G52830 (IAA6) mRNA, complete cds Length = 829 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 582 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 527
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 829 acgagcatccagtcaccatccctgtcctcgta 798
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 790 acgagcatccagtcaccatccctgtcctcgta 759
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 795 acgagcatccagtcaccatccctgtcctcgta 764
>gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, complete sequence Length = 170688 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 aaagagaagatcacaaccca 226 |||||||||||||||||||| Sbjct: 31708 aaagagaagatcacaaccca 31727
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 agcaaaaagaaaagacacaa 111 |||||||||||||||||||| Sbjct: 160747 agcaaaaagaaaagacacaa 160728
>emb|CT025566.7| Mouse DNA sequence from clone RP24-151A22 on chromosome 13, complete sequence Length = 149381 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 aaagagaagatcacaaccca 226 |||||||||||||||||||| Sbjct: 87508 aaagagaagatcacaaccca 87527
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgcc 481 ||||||||| ||||| || || |||||||||||||| Sbjct: 67621 ctcccacggtacgtctcctacaagcatccagtcgcc 67656
>gb|AC121947.2| Mus musculus BAC clone RP24-213L3 from 13, complete sequence Length = 154202 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagcaaaaagaaaagacaca 110 |||||||||||||||||||| Sbjct: 98541 gagcaaaaagaaaagacaca 98522
>ref|XM_652254.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (2.t00121) partial mRNA Length = 2247 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 caatagcttctgatcctttc 410 |||||||||||||||||||| Sbjct: 670 caatagcttctgatcctttc 651
>gb|AY337616.1| Gossypium barbadense Gbiaa-Re (iaa-re) mRNA, complete cds Length = 1043 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 tagcttctgatcctttcattatcc 417 ||||||||||||||||||| |||| Sbjct: 610 tagcttctgatcctttcatgatcc 587
>emb|AL513493.11| Human DNA sequence from clone RP11-433N2 on chromosome 1 Contains the 5' end of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 165780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 20832 tcctgttcttgcatttctcc 20851
>emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chromosome 1 Contains the 5' end of the ARID4B gene for AT rich interactive domain 4B (RBP1- like), a ribosomal protein L23a (RPL23A) pseudogene, ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) (UBE2G10 pseudogene, the GGPS1 gene for geranylgeranyl diphosphate synthase 1 and two CpG islands, complete sequence Length = 142273 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagcagagcaaaaagaaaag 105 |||||||||||||||||||| Sbjct: 48435 aagcagagcaaaaagaaaag 48416
>emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chromosome 6 Contains the gene for a novel protein similar to FK506-binding protein (FKBP-12) (Peptidyl-prolyl cis-trans isomerase)(PPiase) (Rotamase), a pseudogene similar to part of serine palmitoyltransferase long chain base subunit 1(SPTLC1) and a novel pseudogene, complete sequence Length = 168467 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 aaaaagaaaagacacaattatgtg 118 ||||||||||||||||| |||||| Sbjct: 108420 aaaaagaaaagacacaaatatgtg 108443
>emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chromosome 10 Contains a novel pseudogene (FLJ34719 FLJ14936) and the 3' end of a novel gene, complete sequence Length = 110645 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cttagacttaggacagagaa 275 |||||||||||||||||||| Sbjct: 88043 cttagacttaggacagagaa 88062
>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43 Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex homolog (Drosophila) (PCNX) pseudogene and the gene for mixed lineage kinase 4 (KIAA1804), complete sequence Length = 118632 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 actgactggaaaagagaaga 216 |||||||||||||||||||| Sbjct: 12735 actgactggaaaagagaaga 12716
>emb|AL049541.24|HSJ991B18 Human DNA sequence from clone RP5-991B18 on chromosome 20q13.11-13.3 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 129874 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cagagaatatgatacaggga 288 |||||||||||||||||||| Sbjct: 576 cagagaatatgatacaggga 557
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 435 tcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtc 490 ||||| ||||| ||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 671 tcaacaaacatatcccaggggacatcgcctacaagcatccagtctccatccttgtc 616
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 40.1 bits (20), Expect = 7.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 446 ctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctc 493 |||||| || ||||| ||| ||||||| |||||||||||||||||| Sbjct: 47462 ctcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctc 47415
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 696 acgagcatccagtcaccatccctgtcctcgta 665
>emb|AJ627255.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA20 transcriptional repressor (putative IAA20 gene) Length = 561 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 447 tcccacgggacgtccccgacgagcatccagtcgccgtcct 486 ||||| ||||||||||| || | ||||||||| ||||||| Sbjct: 514 tcccatgggacgtccccaaccatcatccagtccccgtcct 475
>gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, complete sequence Length = 147662 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ggaagaacaagcagagcaaa 97 |||||||||||||||||||| Sbjct: 22838 ggaagaacaagcagagcaaa 22857
>emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chromosome 4, complete sequence Length = 129452 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 aagaacaagcagagcaaaaagaaa 103 |||||||||||| ||||||||||| Sbjct: 5755 aagaacaagcagggcaaaaagaaa 5732
>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 14, complete sequence Length = 161300 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 95 aaaaagaaaagacacaattatgtggcagacag 126 |||||||||||||| | || |||||||||||| Sbjct: 57982 aaaaagaaaagacaaatttttgtggcagacag 58013
>gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complete sequence Length = 179139 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 91797 tcctgttcttgcatttctcc 91778
>gb|BT024586.1| Arabidopsis thaliana At3g15540 mRNA, complete cds Length = 594 Score = 40.1 bits (20), Expect = 7.0 Identities = 59/72 (81%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtc 484 |||||||||||| | |||||| |||| || || || ||| ||||||||||||| || || Sbjct: 525 cttgcatgactctagaaacatcccccaaggtacatcaccggcgagcatccagtctccatc 466 Query: 485 cttgtcctcgta 496 ||||| ||||| Sbjct: 465 tttgtcttcgta 454
>gb|AF336915.1| Arabidopsis thaliana clone C00013 (h) IAA6 (At1g52830) mRNA, complete cds Length = 570 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 497 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 442
>gb|AC100733.16| Mus musculus chromosome 15, clone RP24-312H21, complete sequence Length = 151696 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 aagaacaagcagagcaaaaagaaaagacacaa 111 ||||||||||| |||||||||||| |||||| Sbjct: 39295 aagaacaagcaaggcaaaaagaaaaaacacaa 39326
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 35092680 acgagcatccagtcaccatccctgtcctcgta 35092711
>emb|BX817970.1|CNS0AE4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 569 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 514
>gb|AY254569.1| Gossypium barbadense auxin responsive protein IAA-Re (iaa-Re) mRNA, complete cds Length = 750 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 tagcttctgatcctttcattatcc 417 ||||||||||||||||||| |||| Sbjct: 317 tagcttctgatcctttcatgatcc 294
>gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, complete sequence Length = 65183 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 18021 tcctgttcttgcatttctcc 18040
>gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, complete sequence Length = 178845 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 82053 tcctgttcttgcatttctcc 82072
>gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, complete sequence Length = 194789 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 63054 tcctgttcttgcatttctcc 63073
>gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, complete sequence Length = 151383 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 36192 tcctgttcttgcatttctcc 36173
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 153021 acgagcatccagtcaccatccctgtcctcgta 153052
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 65843 acgagcatccagtcaccatccctgtcctcgta 65874
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 790 acgagcatccagtcaccatccctgtcctcgta 759
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 795 acgagcatccagtcaccatccctgtcctcgta 764
>dbj|AK103865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149F09, full insert sequence Length = 860 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 447 tcccacgggacgtccccgacgagcatccagtcgccgtcct 486 ||||| ||||||||||| || | ||||||||| ||||||| Sbjct: 500 tcccatgggacgtccccaaccatcatccagtccccgtcct 461
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 465 acgagcatccagtcgccgtccttgtcctcgta 496 |||||||||||||| || ||| |||||||||| Sbjct: 829 acgagcatccagtcaccatccctgtcctcgta 798
>gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, complete sequence Length = 192478 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 38659 tcctgttcttgcatttctcc 38640
>gb|AC117708.10| Mus musculus chromosome 7, clone RP23-474J16, complete sequence Length = 188333 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagcagagcaaaaagaaaag 105 |||||||||||||||||||| Sbjct: 142377 aagcagagcaaaaagaaaag 142396
>gb|U18408.1|ATU18408 Arabidopsis thaliana IAA6 (IAA6) gene, complete cds Length = 764 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 441 aacatctcccacgggacgtccccgacgagcatccagtcgccgtccttgtcctcgta 496 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 517 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 462
>gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, complete sequence Length = 201265 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 67139 tcctgttcttgcatttctcc 67120
>emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-597A11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185605 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcctgttcttgcatttctcc 371 |||||||||||||||||||| Sbjct: 6170 tcctgttcttgcatttctcc 6151
>gb|U49075.1|ATU49075 Arabidopsis thaliana early auxin-induced (IAA19) mRNA, partial cds Length = 620 Score = 40.1 bits (20), Expect = 7.0 Identities = 59/72 (81%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtc 484 |||||||||||| | |||||| |||| || || || ||| ||||||||||||| || || Sbjct: 370 cttgcatgactctagaaacatcccccaaggtacatcaccggcgagcatccagtctccatc 311 Query: 485 cttgtcctcgta 496 ||||| ||||| Sbjct: 310 tttgtcttcgta 299
>gb|AY669798.1| Arabidopsis thaliana clone C105336 IAA19 (At3g15540) mRNA, complete cds Length = 625 Score = 40.1 bits (20), Expect = 7.0 Identities = 59/72 (81%) Strand = Plus / Minus Query: 425 cttgcatgactcaacgaacatctcccacgggacgtccccgacgagcatccagtcgccgtc 484 |||||||||||| | |||||| |||| || || || ||| ||||||||||||| || || Sbjct: 525 cttgcatgactctagaaacatcccccaaggtacatcaccggcgagcatccagtctccatc 466 Query: 485 cttgtcctcgta 496 ||||| ||||| Sbjct: 465 tttgtcttcgta 454
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 390 ccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaacat 445 ||||| ||||| || ||||||||||| || || |||||||| || || |||||||| Sbjct: 4408 ccaattgcttcagaacctttcattatgcggagacgcttgcaagattctacgaacat 4463
>emb|AL732527.6| Mouse DNA sequence from clone RP23-259B18 on chromosome 4, complete sequence Length = 145837 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 aagaacaagcagagcaaaaagaaa 103 |||||||||||| ||||||||||| Sbjct: 22479 aagaacaagcagggcaaaaagaaa 22502
>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete sequence Length = 193932 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 gcctttgcattttgtgccaggaag 40 ||||||||||||| |||||||||| Sbjct: 26621 gcctttgcattttatgccaggaag 26598
>dbj|D86559.1| Glycyrrhiza glabra mRNA for polyketide reductase (GGPKR2), complete cds Length = 1197 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 caagcaaggttataggtattttga 316 |||||||||||||||| ||||||| Sbjct: 192 caagcaaggttataggcattttga 215 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,652,556 Number of Sequences: 3902068 Number of extensions: 5652556 Number of successful extensions: 108642 Number of sequences better than 10.0: 208 Number of HSP's better than 10.0 without gapping: 210 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 107760 Number of HSP's gapped (non-prelim): 870 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
