Clone Name | rbart21d05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC126403.7| Mus musculus chromosome 15, clone RP24-483E7, complete sequence Length = 152384 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 tggaaagaaaactaggcacaa 163 ||||||||||||||||||||| Sbjct: 140661 tggaaagaaaactaggcacaa 140681
>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence Length = 200074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 tggaaagaaaactaggcacaa 163 ||||||||||||||||||||| Sbjct: 81115 tggaaagaaaactaggcacaa 81135
>gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, complete sequence Length = 159624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ttccaacctccaactgattta 95 ||||||||||||||||||||| Sbjct: 68874 ttccaacctccaactgattta 68894
>gb|AC126677.3| Mus musculus BAC clone RP24-156D14 from chromosome 9, complete sequence Length = 152468 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 aaagaaaactaggcacaaatt 166 ||||||||||||||||||||| Sbjct: 33020 aaagaaaactaggcacaaatt 33040
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cacattgttcatgagcatgg 145 |||||||||||||||||||| Sbjct: 1953570 cacattgttcatgagcatgg 1953551
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cacacattgttcatgagcat 143 |||||||||||||||||||| Sbjct: 51877 cacacattgttcatgagcat 51858
>gb|AC183276.3| Pan troglodytes BAC clone CH251-50A9 from chromosome 19, complete sequence Length = 180204 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 aaagaaaactaggcacaaat 165 |||||||||||||||||||| Sbjct: 51189 aaagaaaactaggcacaaat 51170
>gb|AF390860.1| Homo sapiens isolate UPN2 CBFB/MYH11 translocation breakpoint region sequence Length = 1353 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 aaatgggaatgttttctccacagtgaat 48 |||| ||||||||||||||| ||||||| Sbjct: 136 aaataggaatgttttctccaaagtgaat 163
>gb|AC116564.5| Homo sapiens BAC clone RP11-761E7 from 4, complete sequence Length = 159435 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccacagtgaatatgcccaa 56 |||||||||||||||||||| Sbjct: 84219 tccacagtgaatatgcccaa 84238
>gb|AC093746.3| Homo sapiens BAC clone RP11-27P15 from 4, complete sequence Length = 169391 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccacagtgaatatgcccaa 56 |||||||||||||||||||| Sbjct: 114961 tccacagtgaatatgcccaa 114980
>gb|AC099489.2| Homo sapiens chromosome 16 clone CTD-3088G3, complete sequence Length = 204493 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 aaagaaaactaggcacaaattctt 169 ||||||||| |||||||||||||| Sbjct: 200291 aaagaaaacaaggcacaaattctt 200314
>dbj|AK115161.1| Ciona intestinalis cDNA, clone:cieg036h12, full insert sequence Length = 1592 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 caacctccaactgatttaaaggaa 101 ||||||||||||||||||| |||| Sbjct: 779 caacctccaactgatttaatggaa 802 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,636,366 Number of Sequences: 3902068 Number of extensions: 3636366 Number of successful extensions: 64111 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64082 Number of HSP's gapped (non-prelim): 29 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)