Clone Name | rbart21d04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HUNB_DROTA (O46260) Protein hunchback (Fragments) | 31 | 0.84 | 2 | HUNB_DROPO (O46252) Protein hunchback (Fragments) | 28 | 4.2 | 3 | CAUP_DROME (P54269) Homeobox protein caupolican | 28 | 5.5 | 4 | YNL6_YEAST (P53924) RING finger protein YNL116W | 28 | 5.5 | 5 | TESK1_MOUSE (O70146) Dual specificity testis-specific protein ki... | 28 | 7.1 | 6 | TESK1_RAT (Q63572) Dual specificity testis-specific protein kina... | 28 | 7.1 | 7 | MATN3_CHICK (O42401) Matrilin-3 precursor | 28 | 7.1 |
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>HUNB_DROTA (O46260) Protein hunchback (Fragments)| Length = 192 Score = 30.8 bits (68), Expect = 0.84 Identities = 18/74 (24%), Positives = 30/74 (40%) Frame = +2 Query: 80 ESVGGKAHANHASYISHTCSRRLTTTPHMTPDRRHLKLRDPPQNTKNKIRQMISINRVMN 259 E + H +HA + H S ++PH +P L +PP NT ++ Q + + Sbjct: 13 EPISHHHHHHHAHHSHHADSNSNASSPHQSP----LPSPNPPSNTNLQLEQYLKQQQQQQ 68 Query: 260 CNQQRGQSACMHAC 301 Q+ Q C Sbjct: 69 QQHQQQQQPMDTLC 82
>HUNB_DROPO (O46252) Protein hunchback (Fragments)| Length = 193 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/67 (25%), Positives = 30/67 (44%) Frame = +2 Query: 101 HANHASYISHTCSRRLTTTPHMTPDRRHLKLRDPPQNTKNKIRQMISINRVMNCNQQRGQ 280 HA+H+ + + S ++PH +P L +PP NT ++ Q + + QQ+ Q Sbjct: 23 HAHHSHHRHDSNSNSNASSPHQSP----LPSPNPPSNTNLQLEQYLKQQQQQQQLQQQQQ 78 Query: 281 SACMHAC 301 C Sbjct: 79 QPMDTLC 85
>CAUP_DROME (P54269) Homeobox protein caupolican| Length = 693 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +2 Query: 71 PYTESVGGKAHANHASYISHTCSRRLTTTPHMTPDRRHLKLRDPPQN 211 PY G AH HA+Y S+ S T PH + H + + QN Sbjct: 369 PYATPPG--AHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQN 413
>YNL6_YEAST (P53924) RING finger protein YNL116W| Length = 522 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = -1 Query: 102 CAFPPTDSVYGVPCI-TWHYLCVTKIPNQSYKFF 4 C P +++ PC +WH+ CV ++ SY F Sbjct: 438 CKIKPCQAIFISPCAHSWHFRCVRRLVMLSYPQF 471
>TESK1_MOUSE (O70146) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 627 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +2 Query: 185 LKLRDPPQNTKNKIRQMISINRVMNCNQQRGQSACMH 295 LK+ P N N +R++ +NR+ + N R C+H Sbjct: 80 LKMNKLPSNRSNTLREVQLMNRLRHPNILRFMGVCVH 116
>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 628 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +2 Query: 185 LKLRDPPQNTKNKIRQMISINRVMNCNQQRGQSACMH 295 LK+ P N N +R++ +NR+ + N R C+H Sbjct: 80 LKMNKLPSNRSNTLREVQLMNRLRHPNILRFMGVCVH 116
>MATN3_CHICK (O42401) Matrilin-3 precursor| Length = 452 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 157 GRRQAS*TCVGNVGSMVCMCFPAH 86 GR + CV N GS VC CF + Sbjct: 283 GRHECDQICVSNNGSYVCECFEGY 306 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,463,725 Number of Sequences: 219361 Number of extensions: 1084109 Number of successful extensions: 3190 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3189 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)