>ESCA_ARATH (Q9S7C9) Putative DNA-binding protein ESCAROLA|
          Length = 311

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 27/40 (67%), Positives = 36/40 (90%)
 Frame = -3

Query: 522 KGQVVGGTVVGSLTAAGPVVIMAASFANAVYERLPLEEDE 403
           +GQVVGG+VV  L A+ PV++MAASF+NAV+ERLP+EE+E
Sbjct: 209 QGQVVGGSVVAPLIASAPVILMAASFSNAVFERLPIEEEE 248

>TNP5_ECOLI (P08504) Transposase for transposon Tn2501|
          Length = 994

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/73 (28%), Positives = 30/73 (41%)
 Frame = +3

Query: 39  ETILMRTCYLTRSEIVCNNSHRNPSRCEFKEESYQLKHIITFLMCRLRGPAGMIRTATGG 218
           E IL R C+L   +I   N HR P+           +     L+C LRGP  +   +   
Sbjct: 22  EIILTRMCFLNEQDIALINKHRRPAN----------RLGFAVLLCYLRGPGFIPDKSNVP 71

Query: 219 RRLCLGSICSRLQ 257
               +  I SRL+
Sbjct: 72  HSSVISRIASRLK 84

>YGFK_ECOLI (Q46811) Hypothetical protein ygfK|
          Length = 1032

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +1

Query: 241 SVAGFRRQLHVAEEVGWQPFEEAWIHVPAGHLRCLLPSSQQHPVAV 378
           S    R    VA E GW  +++ W H PAG       S  +HPVAV
Sbjct: 518 SALNIRELKKVALEKGWDEYKQRW-HKPAG-------SGSRHPVAV 555

>YGFK_ECO57 (Q8XD75) Hypothetical protein ygfK|
          Length = 1032

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +1

Query: 241 SVAGFRRQLHVAEEVGWQPFEEAWIHVPAGHLRCLLPSSQQHPVAV 378
           S    R    VA E GW  +++ W H PAG       S  +HPVAV
Sbjct: 518 SALNIRELKKVALEKGWDEYKQRW-HKPAG-------SGSRHPVAV 555

>MURD_ANAMM (Q5PBH9) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 438

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 18/75 (24%)
 Frame = -1

Query: 416 WRKTSCLQRKGRQTATGCCWLLGSKHLRWPA----------------GTWIQASSK--GC 291
           W    C+ RK R+   GC ++   ++ RW                   +W+   +K  GC
Sbjct: 22  WDDDKCVLRKNRELCAGCEFVHPYEY-RWDEISELVLSPGVPHSRCNESWVVKLAKRAGC 80

Query: 290 HPTSSATCSCRLKPA 246
           H TS     CR +PA
Sbjct: 81  HITSDVEIFCRSRPA 95

>CP2F3_CAPHI (O18809) Cytochrome P450 2F3 (EC 1.14.14.1) (CYPIIF3)|
          Length = 491

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +3

Query: 90  NNSHRNPSRCEFKEESYQLKHIITFLMCRLRGPAGMIRTATGGRRLCLGSICSRLQ 257
           N  H +PS+   K + +  +H +   M   + PA M  +A  GRRLCLG   +R++
Sbjct: 393 NTVHYDPSQF-LKPKEFNPEHFLDANMSFKKSPAFMPFSA--GRRLCLGEALARME 445

>GLGB_RHOMR (Q93HU3) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 621

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = -1

Query: 359 WLLGSKHLRWPAGTWIQASSK-GCHPTSSATCSCRLKPATDG 237
           WL      RW +GT+  +  K G HP    T  C   P  DG
Sbjct: 3   WLTEEDIRRWESGTFYDSYRKLGAHPDDEGTWFCVWAPHADG 44

>POL1_GCMV (P13025) RNA1 polyprotein (P1) [Contains: P1A protein (1A)|
           (Protease cofactor); Putative ATP-dependent helicase (EC
           3.6.1.-) (NTP-binding protein) (NTB) (1B)
           (Membrane-binding protein); Viral genome-linked protein
           (1C-VPg); Picornain 3C-like pr
          Length = 2252

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 183 GPAGMIRTATGGRRLCLGSICSRLQAAAA-RCRGGWVAALR 302
           G   +I T  GG  + +   C+ + A  A +C GGW AA R
Sbjct: 520 GLCNLIETIIGGHGMLVSLFCTGVFATMAIKCAGGWDAAQR 560

>Y305_METJA (Q57753) Hypothetical protein MJ0305|
          Length = 395

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 498 VVGSLTAAGPVVIMAASFANAVYERLPLEEDELLAAQGQA 379
           V GS    GP V  +ASFA+ +Y  L L+  EL+   G A
Sbjct: 105 VGGSAGKEGPCVQSSASFADELYRLLKLKNRELVIITGIA 144

>LPH_RAT (Q02401) Lactase-phlorizin hydrolase precursor|
            (Lactase-glycosylceramidase) [Includes: Lactase (EC
            3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
          Length = 1928

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 289  WQPFEEAWIHVPAGHLRCLLPSSQQHP 369
            W  F E W HV  G+   + P S Q P
Sbjct: 1062 WMTFNEPWCHVVLGYSSGIFPPSVQEP 1088


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,799,236
Number of Sequences: 219361
Number of extensions: 1408005
Number of successful extensions: 4403
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4401
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)