ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart21d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 232 9e-58
2dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic D... 232 9e-58
3dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 9e-58
4dbj|AK058424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.007
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
7gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
8ref|XM_466363.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
9ref|XM_466362.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
10emb|AL162500.15| Human DNA sequence from clone RP11-318K19 on ch... 44 0.43
11emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 ... 44 0.43
12gb|AC109488.3| Homo sapiens chromosome 5 clone RP11-57H15, compl... 44 0.43
13gb|AC097357.2| Homo sapiens chromosome 3 clone RP11-137N22, comp... 44 0.43
14gb|AC098480.2| Homo sapiens chromosome 3 clone RP11-149J4, compl... 44 0.43
15gb|AC010344.6| Homo sapiens chromosome 5 clone CTD-2017I7, compl... 44 0.43
16dbj|AK038686.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 44 0.43
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
18gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, comp... 44 0.43
19emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13,... 44 0.43
20dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
21dbj|AK105571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
22dbj|AK101003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
23gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, comple... 44 0.43
24ref|XM_466323.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
25gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic ... 42 1.7
26gb|AY144118.1| Photorhabdus luminescens strain W14 necrotizing f... 42 1.7
27emb|BX276181.15| Zebrafish DNA sequence from clone CH211-247O20 ... 42 1.7
28emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in ... 42 1.7
29gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold 42 1.7
30gb|AC153100.3| Oryctolagus cuniculus clone LB1-192J7, complete s... 42 1.7
31dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.7
32dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
33dbj|AK059010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
34gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map nea... 42 1.7
35gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.8
36gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 6.8
37gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, co... 40 6.8
38gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, comp... 40 6.8
39ref|XM_414461.1| PREDICTED: Gallus gallus similar to FLJ00023 pr... 40 6.8
40gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, comple... 40 6.8
41gb|AC144486.2| Gasterosteus aculeatus clone CH213-169J23, comple... 40 6.8
42gb|AC140433.3| Mus musculus BAC clone RP23-96L16 from chromosome... 40 6.8
43ref|XM_543995.2| PREDICTED: Canis familiaris similar to Arsenite... 40 6.8
44gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.8
45emb|Z93393.2|CEY48E1B Caenorhabditis elegans YAC Y48E1B, complet... 40 6.8
46emb|CR384078.17| Zebrafish DNA sequence from clone DKEY-251E16 i... 40 6.8
47gb|AC122381.2| Mus musculus BAC clone RP23-477C4 from chromosome... 40 6.8
48emb|CR376849.29| Zebrafish DNA sequence from clone CH211-145A9 i... 40 6.8
49ref|XM_541709.2| PREDICTED: Canis familiaris similar to potassiu... 40 6.8
50gb|AC135465.23| Medicago truncatula clone mth2-24h22, complete s... 40 6.8
51gb|AE017245.1| Mycoplasma synoviae 53, complete genome 40 6.8
52emb|AL662814.5| Human DNA sequence from clone RP11-368E13 on chr... 40 6.8
53emb|AL391995.7| Human DNA sequence from clone RP11-522N4 on chro... 40 6.8
54gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.8
55gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 40 6.8
56gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, co... 40 6.8
57gb|AY313451.1| Bordetella bronchiseptica glutamyl tRNA reductase... 40 6.8
58emb|AL121896.11|HSA287B20 Human DNA sequence from clone RP11-287... 40 6.8
59gb|AF140273.1| Ichthyophthirius multifiliis immobilization antig... 40 6.8
60emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, stra... 40 6.8
61emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.8
62emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 6.8
63emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 6.8
64gb|AC153839.10| Mus musculus 6 BAC RP23-93A21 (Roswell Park Canc... 40 6.8
65emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete se... 40 6.8
66emb|AL672083.7| Zebrafish DNA sequence from clone BUSM1-69G10 in... 40 6.8
67gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, comp... 40 6.8
68gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Canc... 40 6.8
69gb|AC146662.3| Callithrix jacchus clone CH259-329B2, complete se... 40 6.8
70gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 6.8
71gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complet... 40 6.8
72gb|AC046175.6| Homo sapiens chromosome 8, clone RP11-577O23, com... 40 6.8
73gb|AC018991.10| Homo sapiens, clone RP11-448E20, complete sequence 40 6.8
74emb|BX470235.7| Zebrafish DNA sequence from clone DKEY-22N8 in l... 40 6.8
75gb|AF266073.1|AF266073 Gomphus vulgatissimus large subunit ribos... 40 6.8
76gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosom... 40 6.8
77gb|AC015866.7|AC015866 Homo sapiens, clone RP11-59A1, complete s... 40 6.8
78ref|NM_064443.3| Caenorhabditis elegans Y48E1B.14a (Y48E1B.14) m... 40 6.8
79emb|BX322616.8| Zebrafish DNA sequence from clone DKEY-21K24 in ... 40 6.8
80gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Canc... 40 6.8
81emb|BX933213.2| Gallus gallus finished cDNA, clone ChEST509d9 40 6.8
82gb|AC008583.6| Homo sapiens chromosome 3 clone CTC-501D11, compl... 40 6.8
83emb|BX649631.8| Zebrafish DNA sequence from clone CH211-186M12 i... 40 6.8
84gb|AF266051.1|AF266051 Gomphus graslini large subunit ribosomal ... 40 6.8
85gb|AC114261.2| Dictyostelium discoideum chromosome 2 map 126059-... 40 6.8
86dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
87dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 6.8
88emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chr... 40 6.8
89gb|AC153962.3| Mus musculus 10 BAC RP24-347C6 (Roswell Park Canc... 40 6.8
90dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
91gb|AC157023.6| Mus musculus 6 BAC RP24-386D10 (Roswell Park Canc... 40 6.8
92emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in l... 40 6.8
93dbj|AP003042.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.8
94gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome... 40 6.8
95gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 6.8
96emb|AL954144.6| Zebrafish DNA sequence from clone CH211-206L15, ... 40 6.8
97emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on ch... 40 6.8
98dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.8
99gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome... 40 6.8 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  232 bits (117), Expect = 9e-58
 Identities = 189/213 (88%)
 Strand = Plus / Plus

                                                                            
Query: 100      tcatgtttccttgggtatggctgtaaggggggtgactaaagataacaccaccccacactt 159
                |||| ||||||||||||||||| | |||||| | |||| |||||||||||||||||||||
Sbjct: 10686901 tcatatttccttgggtatggctttgagggggttaactagagataacaccaccccacactt 10686960

                                                                            
Query: 160      ctctgtcatgtctatcccagtctccttgacgtccgcaggaagctcccactcgaaccgatg 219
                ||| |||||||||||||||  ||||||  | ||||| |||||||||||||||||||||||
Sbjct: 10686961 ctccgtcatgtctatcccaccctcctttgcatccgccggaagctcccactcgaaccgatg 10687020

                                                                            
Query: 220      gagcagcgtgccaagaatcaggggtatcagcttctgagcaagcggcatcccggggcagat 279
                ||| |||||||| |  || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 10687021 gagtagcgtgccgatgatgaggggtatgagcttctgagcaagcggcatcccggggcagat 10687080

                                                 
Query: 280      gcgtcggccaagaccgaacgggatcatctcgaa 312
                ||| ||||| || ||||| |||||||| |||||
Sbjct: 10687081 gcgccggccgaggccgaaggggatcatttcgaa 10687113



 Score =  129 bits (65), Expect = 9e-27
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                            
Query: 376      gaacttgtcgggatccgaccatgcgtcggcgttccggttgatcgcccacgcgttgaggat 435
                ||||||||| || |||||||| ||||||||  ||||||||||||||||||||||||||||
Sbjct: 10687165 gaacttgtccggctccgaccacgcgtcggcactccggttgatcgcccacgcgttgaggat 10687224

                                                                            
Query: 436      cacgttggtgcctttcgggatcctgtagccattcacctcaatgtcagcctccgccttgcg 495
                ||||||||| || || |||||||| ||||| |||||||| |||||  |||| ||||||||
Sbjct: 10687225 cacgttggtccccttggggatcctatagccgttcacctcgatgtcgacctcagccttgcg 10687284

                     
Query: 496      aggta 500
                 ||||
Sbjct: 10687285 gggta 10687289
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>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0036B02
          Length = 168253

 Score =  232 bits (117), Expect = 9e-58
 Identities = 189/213 (88%)
 Strand = Plus / Plus

                                                                         
Query: 100   tcatgtttccttgggtatggctgtaaggggggtgactaaagataacaccaccccacactt 159
             |||| ||||||||||||||||| | |||||| | |||| |||||||||||||||||||||
Sbjct: 39964 tcatatttccttgggtatggctttgagggggttaactagagataacaccaccccacactt 40023

                                                                         
Query: 160   ctctgtcatgtctatcccagtctccttgacgtccgcaggaagctcccactcgaaccgatg 219
             ||| |||||||||||||||  ||||||  | ||||| |||||||||||||||||||||||
Sbjct: 40024 ctccgtcatgtctatcccaccctcctttgcatccgccggaagctcccactcgaaccgatg 40083

                                                                         
Query: 220   gagcagcgtgccaagaatcaggggtatcagcttctgagcaagcggcatcccggggcagat 279
             ||| |||||||| |  || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 40084 gagtagcgtgccgatgatgaggggtatgagcttctgagcaagcggcatcccggggcagat 40143

                                              
Query: 280   gcgtcggccaagaccgaacgggatcatctcgaa 312
             ||| ||||| || ||||| |||||||| |||||
Sbjct: 40144 gcgccggccgaggccgaaggggatcatttcgaa 40176



 Score =  129 bits (65), Expect = 9e-27
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                         
Query: 376   gaacttgtcgggatccgaccatgcgtcggcgttccggttgatcgcccacgcgttgaggat 435
             ||||||||| || |||||||| ||||||||  ||||||||||||||||||||||||||||
Sbjct: 40228 gaacttgtccggctccgaccacgcgtcggcactccggttgatcgcccacgcgttgaggat 40287

                                                                         
Query: 436   cacgttggtgcctttcgggatcctgtagccattcacctcaatgtcagcctccgccttgcg 495
             ||||||||| || || |||||||| ||||| |||||||| |||||  |||| ||||||||
Sbjct: 40288 cacgttggtccccttggggatcctatagccgttcacctcgatgtcgacctcagccttgcg 40347

                  
Query: 496   aggta 500
              ||||
Sbjct: 40348 gggta 40352
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>dbj|AK059089.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B08, full
            insert sequence
          Length = 1743

 Score =  232 bits (117), Expect = 9e-58
 Identities = 189/213 (88%)
 Strand = Plus / Minus

                                                                        
Query: 100  tcatgtttccttgggtatggctgtaaggggggtgactaaagataacaccaccccacactt 159
            |||| ||||||||||||||||| | |||||| | |||| |||||||||||||||||||||
Sbjct: 1615 tcatatttccttgggtatggctttgagggggttaactagagataacaccaccccacactt 1556

                                                                        
Query: 160  ctctgtcatgtctatcccagtctccttgacgtccgcaggaagctcccactcgaaccgatg 219
            ||| |||||||||||||||  ||||||  | ||||| |||||||||||||||||||||||
Sbjct: 1555 ctccgtcatgtctatcccaccctcctttgcatccgccggaagctcccactcgaaccgatg 1496

                                                                        
Query: 220  gagcagcgtgccaagaatcaggggtatcagcttctgagcaagcggcatcccggggcagat 279
            ||| |||||||| |  || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1495 gagtagcgtgccgatgatgaggggtatgagcttctgagcaagcggcatcccggggcagat 1436

                                             
Query: 280  gcgtcggccaagaccgaacgggatcatctcgaa 312
            ||| ||||| || ||||| |||||||| |||||
Sbjct: 1435 gcgccggccgaggccgaaggggatcatttcgaa 1403



 Score =  129 bits (65), Expect = 9e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 376  gaacttgtcgggatccgaccatgcgtcggcgttccggttgatcgcccacgcgttgaggat 435
            ||||||||| || |||||||| ||||||||  ||||||||||||||||||||||||||||
Sbjct: 1351 gaacttgtccggctccgaccacgcgtcggcactccggttgatcgcccacgcgttgaggat 1292

                                                                        
Query: 436  cacgttggtgcctttcgggatcctgtagccattcacctcaatgtcagcctccgccttgcg 495
            ||||||||| || || |||||||| ||||| |||||||| |||||  |||| ||||||||
Sbjct: 1291 cacgttggtccccttggggatcctatagccgttcacctcgatgtcgacctcagccttgcg 1232

                 
Query: 496  aggta 500
             ||||
Sbjct: 1231 gggta 1227
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>dbj|AK058424.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D12, full
            insert sequence
          Length = 1411

 Score =  129 bits (65), Expect = 9e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 376  gaacttgtcgggatccgaccatgcgtcggcgttccggttgatcgcccacgcgttgaggat 435
            ||||||||| || |||||||| ||||||||  ||||||||||||||||||||||||||||
Sbjct: 1351 gaacttgtccggctccgaccacgcgtcggcactccggttgatcgcccacgcgttgaggat 1292

                                                                        
Query: 436  cacgttggtgcctttcgggatcctgtagccattcacctcaatgtcagcctccgccttgcg 495
            ||||||||| || || |||||||| ||||| |||||||| |||||  |||| ||||||||
Sbjct: 1291 cacgttggtccccttggggatcctatagccgttcacctcgatgtcgacctcagccttgcg 1232

                 
Query: 496  aggta 500
             ||||
Sbjct: 1231 gggta 1227
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 152     ccacacttctctgtcatgtctatcccagtctccttga 188
               ||||| || |||||||||||||| |||||||||||||
Sbjct: 7867925 ccacatttttctgtcatgtctataccagtctccttga 7867961



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 339      cggcggtctcgccggcgccgatgaacctctccg 371
                |||||| ||||||| |||||| |||||||||||
Sbjct: 22376208 cggcggcctcgccgtcgccgaggaacctctccg 22376240
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 152     ccacacttctctgtcatgtctatcccagtctccttga 188
               ||||| || |||||||||||||| |||||||||||||
Sbjct: 7865760 ccacatttttctgtcatgtctataccagtctccttga 7865796



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 339      cggcggtctcgccggcgccgatgaacctctccg 371
                |||||| ||||||| |||||| |||||||||||
Sbjct: 22369237 cggcggcctcgccgtcgccgaggaacctctccg 22369269
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>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030J04, complete sequence
          Length = 153431

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 152   ccacacttctctgtcatgtctatcccagtctccttga 188
             ||||| || |||||||||||||| |||||||||||||
Sbjct: 53523 ccacatttttctgtcatgtctataccagtctccttga 53559
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>ref|XM_466363.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1520

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 414 tgatcgcccacgcgttgaggatcacgttggtgcc 447
           |||||||||||||||||| ||||||  |||||||
Sbjct: 152 tgatcgcccacgcgttgaagatcaccgtggtgcc 185
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>ref|XM_466362.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 414  tgatcgcccacgcgttgaggatcacgttggtgcc 447
            |||||||||||||||||| ||||||  |||||||
Sbjct: 1213 tgatcgcccacgcgttgaagatcaccgtggtgcc 1180
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>emb|AL162500.15| Human DNA sequence from clone RP11-318K19 on chromosome 13 Contains part
              of the UGCGL2 gene for UDP-glucose ceramide
              glucosyltransferase-like 2 (HUGT2 FLJ10873 FLJ11485), a
              novel gene and two CpG islands, complete sequence
          Length = 128554

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 19     ttaataatatttttccttacagatct 44
              |||||||||||||||||| |||||||
Sbjct: 103539 ttaataatatttttccttccagatct 103514
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>emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 in linkage group 15,
             complete sequence
          Length = 191457

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 14    tttatttaataatatttttcct 35
             ||||||||||||||||||||||
Sbjct: 68016 tttatttaataatatttttcct 67995
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>gb|AC109488.3| Homo sapiens chromosome 5 clone RP11-57H15, complete sequence
          Length = 48733

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 7     attctgttttatttaataatatttttcctt 36
             |||| ||||||||| |||||||||||||||
Sbjct: 38111 attcagttttattttataatatttttcctt 38140
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>gb|AC097357.2| Homo sapiens chromosome 3 clone RP11-137N22, complete sequence
          Length = 162277

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 5     aaattctgttttatttaataatattt 30
             |||||||||||||||| |||||||||
Sbjct: 28480 aaattctgttttattttataatattt 28455
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>gb|AC098480.2| Homo sapiens chromosome 3 clone RP11-149J4, complete sequence
          Length = 188681

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 5      aaattctgttttatttaataatattt 30
              |||||||||||||||| |||||||||
Sbjct: 146809 aaattctgttttattttataatattt 146784
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>gb|AC010344.6| Homo sapiens chromosome 5 clone CTD-2017I7, complete sequence
          Length = 64467

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 7     attctgttttatttaataatatttttcctt 36
             |||| ||||||||| |||||||||||||||
Sbjct: 23649 attcagttttattttataatatttttcctt 23620
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>dbj|AK038686.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230055A07
           product:gamma-aminobutyric acid (GABA-A) receptor,
           subunit gamma 1, full insert sequence
          Length = 2745

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  ctgttttatttaataatatttt 31
           ||||||||||||||||||||||
Sbjct: 971 ctgttttatttaataatatttt 950
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 414      tgatcgcccacgcgttgaggatcacgttggtgcc 447
                |||||||||||||||||| ||||||  |||||||
Sbjct: 21924368 tgatcgcccacgcgttgaagatcaccgtggtgcc 21924401



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 414      tgatcgcccacgcgttgaggatcac 438
                |||||||||||||||||| ||||||
Sbjct: 21683226 tgatcgcccacgcgttgaagatcac 21683202



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 416     atcgcccacgcgttgaggatcacgttggtgcc 447
               |||||||||||||||| || |||||| |||||
Sbjct: 4721369 atcgcccacgcgttgatgagcacgttagtgcc 4721400
to top
>gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, complete sequence
          Length = 190438

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 10     ctgttttatttaataatatttt 31
              ||||||||||||||||||||||
Sbjct: 107659 ctgttttatttaataatatttt 107638
to top
>emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13, complete sequence
          Length = 142564

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 14     tttatttaataatatttttcct 35
              ||||||||||||||||||||||
Sbjct: 121549 tttatttaataatatttttcct 121570
to top
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0689H05
          Length = 135803

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 414    tgatcgcccacgcgttgaggatcacgttggtgcc 447
              |||||||||||||||||| ||||||  |||||||
Sbjct: 107653 tgatcgcccacgcgttgaagatcaccgtggtgcc 107686
to top
>dbj|AK105571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D01, full
           insert sequence
          Length = 1520

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 414 tgatcgcccacgcgttgaggatcacgttggtgcc 447
           |||||||||||||||||| ||||||  |||||||
Sbjct: 152 tgatcgcccacgcgttgaagatcaccgtggtgcc 185
to top
>dbj|AK101003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147I20, full
            insert sequence
          Length = 1642

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 414  tgatcgcccacgcgttgaggatcacgttggtgcc 447
            |||||||||||||||||| ||||||  |||||||
Sbjct: 1265 tgatcgcccacgcgttgaagatcaccgtggtgcc 1232
to top
>gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, complete sequence
          Length = 182452

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 14     tttatttaataatatttttcct 35
              ||||||||||||||||||||||
Sbjct: 103459 tttatttaataatatttttcct 103438
to top
>ref|XM_466323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1669

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 414  tgatcgcccacgcgttgaggatcac 438
            |||||||||||||||||| ||||||
Sbjct: 1226 tgatcgcccacgcgttgaagatcac 1202
to top
>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete
             sequence
          Length = 73070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 339   cggcggtctcgccggcgccgatgaacctctccg 371
             |||||| ||||||| |||||| |||||||||||
Sbjct: 36236 cggcggcctcgccgtcgccgaggaacctctccg 36204
to top
>gb|AY144118.1| Photorhabdus luminescens strain W14 necrotizing factor locus, partial
            sequence
          Length = 35280

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 12   gttttatttaataatattttt 32
            |||||||||||||||||||||
Sbjct: 4326 gttttatttaataatattttt 4306
to top
>emb|BX276181.15| Zebrafish DNA sequence from clone CH211-247O20 in linkage group 5,
             complete sequence
          Length = 154012

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     acaaaattctgttttatttaa 22
             |||||||||||||||||||||
Sbjct: 50949 acaaaattctgttttatttaa 50969
to top
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17,
            complete sequence
          Length = 153540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 10   ctgttttatttaataatattt 30
            |||||||||||||||||||||
Sbjct: 7540 ctgttttatttaataatattt 7560
to top
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     tacaagtcatgtttccttggg 114
              |||||||||||||||||||||
Sbjct: 873139 tacaagtcatgtttccttggg 873159
to top
>gb|AC153100.3| Oryctolagus cuniculus clone LB1-192J7, complete sequence
          Length = 132131

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    tacaagtcatgtttccttggg 114
             |||||||||||||||||||||
Sbjct: 39359 tacaagtcatgtttccttggg 39379
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 418     cgcccacgcgttgaggatcac 438
               |||||||||||||||||||||
Sbjct: 4384198 cgcccacgcgttgaggatcac 4384218
to top
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0025F02
          Length = 156545

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 414   tgatcgcccacgcgttgaggatcac 438
             |||||||||||||||||| ||||||
Sbjct: 64623 tgatcgcccacgcgttgaagatcac 64599
to top
>dbj|AK059010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H10, full
            insert sequence
          Length = 1669

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 414  tgatcgcccacgcgttgaggatcac 438
            |||||||||||||||||| ||||||
Sbjct: 1226 tgatcgcccacgcgttgaagatcac 1202
to top
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence
          Length = 110684

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 3     caaaattctgttttatttaataatatttt 31
             |||||||| ||||||||||||| ||||||
Sbjct: 81963 caaaattcagttttatttaatattatttt 81991
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    tctcgccggcgccgatgaac 364
              ||||||||||||||||||||
Sbjct: 471408 tctcgccggcgccgatgaac 471427
to top
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      tctgttttatttaataatattttt 32
              ||||||||||||||||| ||||||
Sbjct: 289710 tctgttttatttaataagattttt 289687
to top
>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence
          Length = 203772

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   caccccacacttctctgtcatgtc 171
             ||||||||||||||||||| ||||
Sbjct: 30001 caccccacacttctctgtcctgtc 29978
to top
>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacaaaattctgttttattt 20
             ||||||||||||||||||||
Sbjct: 26118 aacaaaattctgttttattt 26099
to top
>ref|XM_414461.1| PREDICTED: Gallus gallus similar to FLJ00023 protein (LOC416129),
            mRNA
          Length = 1024

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tttatttaataatatttttc 33
            ||||||||||||||||||||
Sbjct: 1010 tttatttaataatatttttc 991
to top
>gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, complete sequence
          Length = 217665

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ctgttttatttaataatatt 29
             ||||||||||||||||||||
Sbjct: 27292 ctgttttatttaataatatt 27273
to top
>gb|AC144486.2| Gasterosteus aculeatus clone CH213-169J23, complete sequence
          Length = 157502

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ctgttttatttaataatatt 29
             ||||||||||||||||||||
Sbjct: 20542 ctgttttatttaataatatt 20561
to top
>gb|AC140433.3| Mus musculus BAC clone RP23-96L16 from chromosome 16, complete sequence
          Length = 231593

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 51086 ttttatttaataatattttt 51105
to top
>ref|XM_543995.2| PREDICTED: Canis familiaris similar to Arsenite methyltransferase
           (S-adenosyl-L-methionine:arsenic(III) methyltransferase)
           (Methylarsonite methyltransferase) (Cyt19) (LOC486865),
           mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 tctgtcatgtctatcccagt 180
           ||||||||||||||||||||
Sbjct: 176 tctgtcatgtctatcccagt 157
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 345     tctcgccggcgccgatgaac 364
               ||||||||||||||||||||
Sbjct: 3475105 tctcgccggcgccgatgaac 3475086
to top
>emb|Z93393.2|CEY48E1B Caenorhabditis elegans YAC Y48E1B, complete sequence
          Length = 84705

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 424  cgcgttgaggatcacgttgg 443
            ||||||||||||||||||||
Sbjct: 1075 cgcgttgaggatcacgttgg 1056
to top
>emb|CR384078.17| Zebrafish DNA sequence from clone DKEY-251E16 in linkage group 6,
             complete sequence
          Length = 181633

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 67608 ttttatttaataatattttt 67589
to top
>gb|AC122381.2| Mus musculus BAC clone RP23-477C4 from chromosome 16, complete sequence
          Length = 188889

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ttttatttaataatattttt 32
              ||||||||||||||||||||
Sbjct: 149174 ttttatttaataatattttt 149193
to top
>emb|CR376849.29| Zebrafish DNA sequence from clone CH211-145A9 in linkage group 11,
              complete sequence
          Length = 147098

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      tctgttttatttaataatat 28
              ||||||||||||||||||||
Sbjct: 115696 tctgttttatttaataatat 115715
to top
>ref|XM_541709.2| PREDICTED: Canis familiaris similar to potassium channel
           tetramerisation domain containing 15 (LOC484595), mRNA
          Length = 852

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ttgacgtccgcaggaagctc 204
           ||||||||||||||||||||
Sbjct: 361 ttgacgtccgcaggaagctc 342
to top
>gb|AC135465.23| Medicago truncatula clone mth2-24h22, complete sequence
          Length = 109043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 68498 ttttatttaataatattttt 68517
to top
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     ttttatttaataatattttt 32
              ||||||||||||||||||||
Sbjct: 689041 ttttatttaataatattttt 689022
to top
>emb|AL662814.5| Human DNA sequence from clone RP11-368E13 on chromosome X, complete
             sequence
          Length = 74571

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttatttaataatatttttcc 34
             ||||||||||||||||||||
Sbjct: 25819 ttatttaataatatttttcc 25838
to top
>emb|AL391995.7| Human DNA sequence from clone RP11-522N4 on chromosome 13, complete
             sequence
          Length = 178920

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 41806 ttttatttaataatattttt 41787
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 338   gcggcggtctcgccggcgccgatg 361
             ||||||||||||||| ||||||||
Sbjct: 73689 gcggcggtctcgccgtcgccgatg 73712
to top
>gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1 of 13 of the complete
             sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    tatttaataatatttttccttaca 39
             |||| |||||||||||||||||||
Sbjct: 37293 tattaaataatatttttccttaca 37316
to top
>gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, complete sequence
          Length = 179454

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      acaaaattctgttttattta 21
              ||||||||||||||||||||
Sbjct: 161868 acaaaattctgttttattta 161887
to top
>gb|AY313451.1| Bordetella bronchiseptica glutamyl tRNA reductase (hemA) gene,
           complete cds
          Length = 1161

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 345 tctcgccggcgccgatgaac 364
           ||||||||||||||||||||
Sbjct: 583 tctcgccggcgccgatgaac 564
to top
>emb|AL121896.11|HSA287B20 Human DNA sequence from clone RP11-287B20 on chromosome 20 Contains
             part of the gene for KIAA1272 for a protein similar to rat
             tulip proteins 1 and 2, complete sequence
          Length = 168545

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 24264 ttttatttaataatattttt 24245
to top
>gb|AF140273.1| Ichthyophthirius multifiliis immobilization antigen precursor
          (IAG48) gene, complete cds
          Length = 2486

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 ttttatttaataatattttt 32
          ||||||||||||||||||||
Sbjct: 15 ttttatttaataatattttt 34
to top
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11
          Length = 346357

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   cgaaccgatggagcagcgtg 229
             ||||||||||||||||||||
Sbjct: 26449 cgaaccgatggagcagcgtg 26468
to top
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tctcgccggcgccgatgaac 364
             ||||||||||||||||||||
Sbjct: 49096 tctcgccggcgccgatgaac 49077
to top
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tctcgccggcgccgatgaac 364
             ||||||||||||||||||||
Sbjct: 53088 tctcgccggcgccgatgaac 53069
to top
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    tctcgccggcgccgatgaac 364
              ||||||||||||||||||||
Sbjct: 347428 tctcgccggcgccgatgaac 347409
to top
>gb|AC153839.10| Mus musculus 6 BAC RP23-93A21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 225351

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tgttttatttaataatattt 30
              ||||||||||||||||||||
Sbjct: 207978 tgttttatttaataatattt 207959
to top
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4
          Length = 293050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tttaataatatttttcctta 37
             ||||||||||||||||||||
Sbjct: 68741 tttaataatatttttcctta 68722
to top
>emb|AL672083.7| Zebrafish DNA sequence from clone BUSM1-69G10 in linkage group 1
             Contains the 3' end of a novel gene similar to ITSN1
             (intersectin long variant, SH3 domain protein), the
             pknox1.2 gene (pbx/knotted 1 homeobox 1.2), a novel gene
             similar to TMPRSS3 (transmembrane protease, serine 3), a
             novel gene similar to PDXK (pyridoxal kinase) and a CpG
             island, complete sequence
          Length = 111516

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     aaaattctgttttatttaataata 27
             |||||||| |||||||||||||||
Sbjct: 53375 aaaattctattttatttaataata 53398
to top
>gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, complete sequence
          Length = 193326

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacaaaattctgttttattt 20
             ||||||||||||||||||||
Sbjct: 79455 aacaaaattctgttttattt 79436
to top
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 243990

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 246    tcagcttctgagcaagcggcatcc 269
              |||||||||||| |||||||||||
Sbjct: 160844 tcagcttctgagtaagcggcatcc 160821
to top
>gb|AC146662.3| Callithrix jacchus clone CH259-329B2, complete sequence
          Length = 136587

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     tctgttttatttaataatattttt 32
             ||||||||||||||||| ||||||
Sbjct: 78407 tctgttttatttaataagattttt 78384
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gcggcatcccggggcagatg 280
              ||||||||||||||||||||
Sbjct: 504963 gcggcatcccggggcagatg 504982
to top
>gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complete sequence
          Length = 167791

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     caaaattctgttttatttaataat 26
             ||||||| ||||||||||||||||
Sbjct: 77831 caaaattgtgttttatttaataat 77808
to top
>gb|AC046175.6| Homo sapiens chromosome 8, clone RP11-577O23, complete sequence
          Length = 194972

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aacaaaattctgttttattt 20
              ||||||||||||||||||||
Sbjct: 107417 aacaaaattctgttttattt 107436
to top
>gb|AC018991.10| Homo sapiens, clone RP11-448E20, complete sequence
          Length = 174049

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacaaaattctgttttattt 20
             ||||||||||||||||||||
Sbjct: 60375 aacaaaattctgttttattt 60394
to top
>emb|BX470235.7| Zebrafish DNA sequence from clone DKEY-22N8 in linkage group 1,
             complete sequence
          Length = 111247

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     aaaattctgttttatttaataata 27
             |||||||| |||||||||||||||
Sbjct: 51430 aaaattctattttatttaataata 51453
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>gb|AF266073.1|AF266073 Gomphus vulgatissimus large subunit ribosomal RNA gene, partial
           sequence; tRNA-Valine gene, complete sequence; and small
           subunit ribosomal RNA gene, partial sequence;
           mitochondrial genes for mitochondrial products
          Length = 1851

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   aaaattctgttttatttaat 23
           ||||||||||||||||||||
Sbjct: 759 aaaattctgttttatttaat 740
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>gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosome 13, complete
             sequence
          Length = 180558

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttatttaataatattttt 32
             ||||||||||||||||||||
Sbjct: 76321 ttttatttaataatattttt 76302
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>gb|AC015866.7|AC015866 Homo sapiens, clone RP11-59A1, complete sequence
          Length = 150564

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacaaaattctgttttattt 20
             ||||||||||||||||||||
Sbjct: 21394 aacaaaattctgttttattt 21413
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>ref|NM_064443.3| Caenorhabditis elegans Y48E1B.14a (Y48E1B.14) mRNA, complete cds
          Length = 3001

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 424  cgcgttgaggatcacgttgg 443
            ||||||||||||||||||||
Sbjct: 2725 cgcgttgaggatcacgttgg 2744
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>emb|BX322616.8| Zebrafish DNA sequence from clone DKEY-21K24 in linkage group 25,
              complete sequence
          Length = 232304

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tgttttatttaataatattt 30
              ||||||||||||||||||||
Sbjct: 219874 tgttttatttaataatattt 219855
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>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215953

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 246    tcagcttctgagcaagcggcatcc 269
              |||||||||||| |||||||||||
Sbjct: 196845 tcagcttctgagtaagcggcatcc 196868
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>emb|BX933213.2| Gallus gallus finished cDNA, clone ChEST509d9
          Length = 753

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tttatttaataatatttttc 33
           ||||||||||||||||||||
Sbjct: 744 tttatttaataatatttttc 725
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>gb|AC008583.6| Homo sapiens chromosome 3 clone CTC-501D11, complete sequence
          Length = 122493

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctctgtcatgtctatcccag 179
             ||||||||||||||||||||
Sbjct: 49173 ctctgtcatgtctatcccag 49154
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>emb|BX649631.8| Zebrafish DNA sequence from clone CH211-186M12 in linkage group 22,
             complete sequence
          Length = 168355

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aattctgttttatttaataa 25
             ||||||||||||||||||||
Sbjct: 45641 aattctgttttatttaataa 45660
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>gb|AF266051.1|AF266051 Gomphus graslini large subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 870

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   aaaattctgttttatttaat 23
           ||||||||||||||||||||
Sbjct: 760 aaaattctgttttatttaat 741
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>gb|AC114261.2| Dictyostelium discoideum chromosome 2 map 126059-159710 strain AX4,
             complete sequence
          Length = 33651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tttatttaataatatttttc 33
             ||||||||||||||||||||
Sbjct: 31178 tttatttaataatatttttc 31159
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>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1115_B01
          Length = 129329

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 416  atcgcccacgcgttgaggatcacgttggtgcc 447
            |||||||||||||||| || |||||| |||||
Sbjct: 1959 atcgcccacgcgttgatgagcacgttagtgcc 1990
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 13      ttttatttaataatattttt 32
               ||||||||||||||||||||
Sbjct: 2990003 ttttatttaataatattttt 2989984
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>emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chromosome 2, complete
              sequence
          Length = 190991

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 100    tcatgtttccttgggtatggctgt 123
              ||||||||||||||| ||||||||
Sbjct: 171817 tcatgtttccttggggatggctgt 171840
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>gb|AC153962.3| Mus musculus 10 BAC RP24-347C6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 147491

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    gttttatttaataatatttt 31
             ||||||||||||||||||||
Sbjct: 30939 gttttatttaataatatttt 30920
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>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1572_F02
          Length = 93626

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 416   atcgcccacgcgttgaggatcacgttggtgcc 447
             |||||||||||||||| || |||||| |||||
Sbjct: 93441 atcgcccacgcgttgatgagcacgttagtgcc 93472
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>gb|AC157023.6| Mus musculus 6 BAC RP24-386D10 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 170298

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     tgttttatttaataatattt 30
              ||||||||||||||||||||
Sbjct: 118636 tgttttatttaataatattt 118655
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>emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in linkage group 20,
             complete sequence
          Length = 195351

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaaattctgttttatttaat 23
             ||||||||||||||||||||
Sbjct: 44941 aaaattctgttttatttaat 44922
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>dbj|AP003042.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-164B14, complete
            sequence
          Length = 111864

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    aaattctgttttatttaata 24
            ||||||||||||||||||||
Sbjct: 4974 aaattctgttttatttaata 4955
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>gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome 17, complete sequence
          Length = 178835

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacaaaattctgttttattt 20
             ||||||||||||||||||||
Sbjct: 87218 aacaaaattctgttttattt 87199
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     ggtctcgccggcgccgatga 362
               ||||||||||||||||||||
Sbjct: 2377814 ggtctcgccggcgccgatga 2377795
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>emb|AL954144.6| Zebrafish DNA sequence from clone CH211-206L15, complete sequence
          Length = 156893

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ctgttttatttaataatatt 29
             ||||||||||||||||||||
Sbjct: 39301 ctgttttatttaataatatt 39282
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>emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on chromosome X, complete
             sequence
          Length = 166357

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aacaaaattctgttttatttaata 24
             |||| |||||||||||||||||||
Sbjct: 47692 aacataattctgttttatttaata 47669
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>dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21G09, TM0131,
             complete sequence
          Length = 93645

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aataatatttttccttacag 40
             ||||||||||||||||||||
Sbjct: 82220 aataatatttttccttacag 82201
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>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence
          Length = 211272

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacaaaattctgttttattt 20
             ||||||||||||||||||||
Sbjct: 15973 aacaaaattctgttttattt 15992


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,095,585
Number of Sequences: 3902068
Number of extensions: 4095585
Number of successful extensions: 98595
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97932
Number of HSP's gapped (non-prelim): 663
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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